RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 KMT2AQ03164 3969 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 IGKV2-24A0A0C4DH68 120 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 A0A0U1RQV1 116 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 F8WEM9 126 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 HIST1H4AP62805 103 aaKnown RBP1.75□□□□□ -2.13
LINC00393-201ENST00000443621 C4orf26Q17RF5 130 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 C1orf137Q5JT78 98 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 Q75L30 129 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 SSBP3-AS1Q7Z2R9 100 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 SMIM29Q86T20 159 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 Q8NBF4 154 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 LINC00846Q9NV44 126 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 ALMS1Q8TCU4 4167 aa1.75□□□□□ -2.13
LINC00393-201ENST00000443621 FRAS1Q86XX4 4008 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 J3KT08 172 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 M0R2N4 97 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 ATOX1O00244 68 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 OXTP01178 125 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 UBE2AP49459 152 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 SEC61BP60468 96 aaKnown RBP1.74□□□□□ -2.13
LINC00393-201ENST00000443621 ASB16-AS1Q495Z4 193 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 Q5XG85 94 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 PHF5AQ7RTV0 110 aaKnown RBP1.74□□□□□ -2.13
LINC00393-201ENST00000443621 DPH3Q96FX2 82 aa1.74□□□□□ -2.13
LINC00393-201ENST00000443621 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.74□□□□□ -2.13
LINC00393-201ENST00000443621 MT-ATP8P03928 68 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 IGLV7-43P04211 117 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 CHTF8P0CG12 524 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 RPS29P62273 56 aaKnown RBP1.73□□□□□ -2.13
LINC00393-201ENST00000443621 RPS28P62857 69 aaKnown RBP1.73□□□□□ -2.13
LINC00393-201ENST00000443621 NREPQ16612 68 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 Q6ZVQ6 151 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 CIRBP-AS1Q8TBR5 109 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 HIGD2AQ9BW72 106 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 KRTAP3-3Q9BYR6 98 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 KRTAP3-2Q9BYR7 98 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 PSORS1C2Q9UIG4 136 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 PKD1P98161 4303 aa1.73□□□□□ -2.13
LINC00393-201ENST00000443621 A0A1W2PNM2 257 aa1.72□□□□□ -2.13
LINC00393-201ENST00000443621 PANO1I0J062 215 aa1.72□□□□□ -2.13
LINC00393-201ENST00000443621 ERC2-IT1O76042 136 aa1.72□□□□□ -2.13
LINC00393-201ENST00000443621 PRLHP81277 87 aa1.72□□□□□ -2.13
LINC00393-201ENST00000443621 IGFL1Q6UW32 110 aa1.72□□□□□ -2.13
LINC00393-201ENST00000443621 SPINK6Q6UWN8 80 aa1.72□□□□□ -2.13
LINC00393-201ENST00000443621 DNAH8Q96JB1 4490 aa1.72□□□□□ -2.13
LINC00393-201ENST00000443621 FAT2Q9NYQ8 4349 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 A0A1B0GVY2 172 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 BPY2O14599 106 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 UQCRQO14949 82 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP10-2P60368 255 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 PMAIP1Q13794 54 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 SPAG11AQ6PDA7 123 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 SCXQ7RTU7 201 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 SERP2Q8N6R1 65 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 ST20-AS1Q8NBB2 130 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 DEFB105AQ8NG35 78 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 DNAH11Q96DT5 4516 aa1.71□□□□□ -2.14
LINC00393-201ENST00000443621 TRAV7A0A075B6U4 112 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 FAM236DA0A1B0GTK5 79 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 FAM236AA0A1B0GUQ0 79 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 FAM236BA0A1B0GV22 79 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 FAM229AH3BQW9 127 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 NDUFB1O75438 58 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 CDK2AP2O75956 126 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 FAM236CP0DP71 79 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 COX7CP15954 63 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 HAMPP81172 84 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP11-1Q8IUC1 163 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 ANAPC13Q9BS18 74 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP17-1Q9BYP8 105 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
LINC00393-201ENST00000443621 SACSQ9NZJ4 4579 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 A8MWP4 228 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 H3BPC8 53 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 NDUFC1O43677 76 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 SPINK1P00995 79 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP10-1P60331 282 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 KLKP1Q107X0 134 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 C3orf22Q8N5N4 141 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 TP53AIP1Q9HCN2 124 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 DNAH5Q8TE73 4624 aa1.69□□□□□ -2.14
LINC00393-201ENST00000443621 A0A087WSZ3 146 aa1.68□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.68□□□□□ -2.14
LINC00393-201ENST00000443621 IGKV4-1P06312 121 aa1.68□□□□□ -2.14
LINC00393-201ENST00000443621 DSCR10P59022 87 aa1.68□□□□□ -2.14
LINC00393-201ENST00000443621 MOBPQ13875 183 aa1.68□□□□□ -2.14
LINC00393-201ENST00000443621 PRR15Q8IV56 129 aa1.68□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP4-8Q9BYQ9 185 aa1.68□□□□□ -2.14
LINC00393-201ENST00000443621 SRRM2Q9UQ35 2752 aaKnown RBP1.67□□□□□ -2.14
LINC00393-201ENST00000443621 IGKV3D-7A0A0C4DH55 119 aa1.67□□□□□ -2.14
LINC00393-201ENST00000443621 HCG22E2RYF7 251 aa1.67□□□□□ -2.14
LINC00393-201ENST00000443621 C8orf87E5RJ46 101 aa1.67□□□□□ -2.14
LINC00393-201ENST00000443621 KRTAP1-4P0C5Y4 121 aa1.67□□□□□ -2.14
LINC00393-201ENST00000443621 ATP5EP56381 51 aaPredicted RBP1.67□□□□□ -2.14
LINC00393-201ENST00000443621 C9orf153Q5TBE3 101 aa1.67□□□□□ -2.14
LINC00393-201ENST00000443621 OCR1Q9BZK8 76 aa1.67□□□□□ -2.14
LINC00393-201ENST00000443621 LRP1BQ9NZR2 4599 aa1.66□□□□□ -2.14
LINC00393-201ENST00000443621 IGLV9-49A0A0B4J1Y8 123 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms