RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 KRTAP4-8A0A0G2JLE6 195 aa1.9□□□□□ -2.11
LIG4-203ENST00000442234 K7EQD1 137 aa1.9□□□□□ -2.11
LIG4-203ENST00000442234 PRR3P79522 188 aaKnown RBP1.9□□□□□ -2.11
LIG4-203ENST00000442234 Q8N9P0 234 aaPredicted RBP1.9□□□□□ -2.11
LIG4-203ENST00000442234 IGLV5-45A0A087WSX0 123 aa1.9□□□□□ -2.11
LIG4-203ENST00000442234 COX7BP24311 80 aa1.9□□□□□ -2.11
LIG4-203ENST00000442234 Q75L30 129 aa1.9□□□□□ -2.11
LIG4-203ENST00000442234 CHCHD7Q9BUK0 85 aa1.9□□□□□ -2.11
LIG4-203ENST00000442234 RHPN1-AS1Q9BWJ2 59 aa1.9□□□□□ -2.11
LIG4-203ENST00000442234 SPAG11AQ6PDA7 123 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 LINC00575Q6W349 94 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 H0Y9J4 135 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 IGLV1-47P01700 117 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 IGHV3-53P01767 116 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 C9orf66Q5T8R8 295 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 IGLV4-60A0A075B6I1 120 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 A8MTW9 85 aa1.89□□□□□ -2.11
LIG4-203ENST00000442234 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.89□□□□□ -2.11
LIG4-203ENST00000442234 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.88□□□□□ -2.11
LIG4-203ENST00000442234 LOC100131303A0A0U1RQF7 123 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 IGLV1-44P01699 117 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 MINOS1Q5TGZ0 78 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 WFDC13Q8IUB5 93 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 KLK12Q9UKR0 248 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 A0A096LNT2 108 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 KLLNB2CW77 178 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 ELOF1P60002 83 aaKnown RBP1.88□□□□□ -2.11
LIG4-203ENST00000442234 CDC42SE2Q9NRR3 84 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 DNAH2Q9P225 4427 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 TRGV1A0A0A0MS02 117 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 IGHV7-81A0A0B4J1V7 117 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 C10orf25Q5T742 122 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 WFDC10BQ8IUB3 73 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 Q8N9W7 124 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 DEFB105AQ8NG35 78 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 LINC00167Q96N53 147 aa1.88□□□□□ -2.11
LIG4-203ENST00000442234 NPBQ8NG41 125 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 KRTAP4-5Q9BYR2 181 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 C1orf134Q5TEV5 83 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 ADM2Q7Z4H4 148 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 COA5Q86WW8 74 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 ZNF702PQ9H963 129 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 DEFB116Q30KQ4 102 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 CLPSL2Q6UWE3 100 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 ST20-AS1Q8NBB2 130 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 LINC00476Q8WZB0 136 aa1.87□□□□□ -2.11
LIG4-203ENST00000442234 TRGV4A0A0C4DH28 118 aa1.86□□□□□ -2.11
LIG4-203ENST00000442234 HSPG2P98160 4391 aa1.86□□□□□ -2.11
LIG4-203ENST00000442234 H0Y9P7 68 aa1.86□□□□□ -2.11
LIG4-203ENST00000442234 GYPEP15421 78 aa1.86□□□□□ -2.11
LIG4-203ENST00000442234 DEFB131AP59861 70 aa1.86□□□□□ -2.11
LIG4-203ENST00000442234 FAM104AQ969W3 186 aa1.86□□□□□ -2.11
LIG4-203ENST00000442234 FSIP2Q5CZC0 6907 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 SPINK7P58062 85 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 CSAG1Q6PB30 78 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 Q8NAQ8 132 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 KAAG1Q9UBP8 84 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 IGHV6-1A0A0B4J1U7 121 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 LCE6AA0A183 80 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 PLA2G1BP04054 148 aaKnown RBP1.85□□□□□ -2.11
LIG4-203ENST00000442234 DEFB114Q30KQ6 69 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 PCOTHQ58A44 107 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 Q6ZSN1 163 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 Q9BRP9 147 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 TNXBP22105 4242 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 HERC2O95714 4834 aa1.85□□□□□ -2.11
LIG4-203ENST00000442234 KRTAP9-7A8MTY7 169 aa1.84□□□□□ -2.11
LIG4-203ENST00000442234 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
LIG4-203ENST00000442234 KRTAP4-9Q9BYQ8 210 aa1.84□□□□□ -2.11
LIG4-203ENST00000442234 DEFB131BA0A096LNP1 70 aa1.84□□□□□ -2.12
LIG4-203ENST00000442234 LINC00612Q8N6U2 182 aa1.84□□□□□ -2.12
LIG4-203ENST00000442234 MINOS1-NBL1R4GNA1 71 aa1.84□□□□□ -2.12
LIG4-203ENST00000442234 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.12
LIG4-203ENST00000442234 IGLV10-54A0A075B6I4 117 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 K7EQZ3 153 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 KIAA0087Q14695 138 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 Q8IZM0 81 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 ZCCHC13Q8WW36 166 aaKnown RBP1.83□□□□□ -2.12
LIG4-203ENST00000442234 USMG5Q96IX5 58 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 IGHV3OR16-9A0A0B4J2B5 98 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 LINC01558Q9Y6Z2 57 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 KIAA1109Q2LD37 5005 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 A6NDX4 124 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 XAGE1AQ9HD64 81 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 ABCA13Q86UQ4 5058 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 ODF3BA8MYP8 253 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 H3BPC8 53 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 COX17Q14061 63 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 KRTAP9-3Q9BYQ3 159 aa1.83□□□□□ -2.12
LIG4-203ENST00000442234 LINC00959A0A1B0GUT2 108 aa1.82□□□□□ -2.12
LIG4-203ENST00000442234 C1orf137Q5JT78 98 aa1.82□□□□□ -2.12
LIG4-203ENST00000442234 KPRPQ5T749 579 aaPredicted RBP1.82□□□□□ -2.12
LIG4-203ENST00000442234 MIR22HGQ0VDD5 57 aa1.82□□□□□ -2.12
LIG4-203ENST00000442234 REG3GQ6UW15 175 aa1.82□□□□□ -2.12
LIG4-203ENST00000442234 KCNQ1DNQ9H478 68 aa1.82□□□□□ -2.12
LIG4-203ENST00000442234 ODF3L2Q3SX64 289 aa1.82□□□□□ -2.12
LIG4-203ENST00000442234 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
LIG4-203ENST00000442234 NOP10Q9NPE3 64 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms