RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PDCD10Q9BUL8 212 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 SEC11CQ9BY50 192 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 C10orf95Q9H7T3 257 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TMEM14BQ9NUH8 114 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TMEM242Q9NWH2 141 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 SCP2D1Q9UJQ7 156 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 V9GYS6 101 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TMEM14DPA8MWL7 114 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 OOSP1A8MZH6 123 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 CORTO00230 105 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 IL5P05113 134 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TRAPPC2P0DI81 140 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TRAPPC2BP0DI82 140 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 GNG2P59768 71 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 RPL37P61927 97 aaKnown RBP0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 C9orf116Q5BN46 136 aaPredicted RBP0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 Q6AWC8 147 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 VMO1Q7Z5L0 202 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TOMM5Q8N4H5 51 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TSKUQ8WUA8 353 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 SMIM4Q8WVI0 70 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 LSM10Q969L4 123 aaKnown RBP0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 NAA60Q9H7X0 242 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 KAAG1Q9UBP8 84 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 A0A087WTM6 91 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 DEFB131BA0A096LNP1 70 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 SNRPGP15A8MWD9 76 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 M0R1W7 72 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 AKAIN1P0CW23 69 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 RPS27P42677 84 aaKnown RBP0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 CATR1Q13166 79 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 Q56UQ5 140 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 HEPN1Q6WQI6 88 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 CYP2G1PQ6ZSU1 146 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 PPP1R1CQ8WVI7 109 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 COA4Q9NYJ1 87 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 LINC00312Q9Y6C7 94 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 V9GYH0 126 aa0.63□□□□□ -2.31
TRAPPC13-204ENST00000438419 TRAV12-3A0A0B4J271 114 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 A6NIN4 97 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 F6UZH7 168 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 SFT2D2O95562 160 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 CFDP00746 253 aaPredicted RBP0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 CBLN1P23435 193 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 S100PP25815 95 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 MT4P47944 62 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 EDDM3BP56851 147 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 NPC2P61916 151 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 UBE2G1P62253 170 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 INSL4Q14641 139 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 HMGN3Q15651 99 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 KRTAP19-2Q3LHN2 52 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 PIGYQ3MUY2 71 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 C6orf201Q7Z4U5 140 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 ARHGAP5-AS1Q96IT6 56 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 SPRR2FQ96RM1 72 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 TTTY10Q9BZA0 68 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 NMES1Q9C002 83 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 BET1LQ9NYM9 111 aa0.62□□□□□ -2.31
TRAPPC13-204ENST00000438419 TRAV30A0A087WSZ9 112 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 KANTRA0A1W2PQU2 76 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 CRYM-AS1A6NIL9 109 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 CEBPZOSA8MTT3 80 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 UMAD1C9J7I0 102 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 H3BUA1 57 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 SNCGO76070 127 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 MPC2O95563 127 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 GYPAP02724 150 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 SNCAP37840 140 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 ELOF1P60002 83 aaKnown RBP0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 SERF2P84101 59 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 PLGLAQ15195 96 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 NMSQ5H8A3 153 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 ZNF818PQ6ZRF7 136 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 Q8N8P6 123 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 USMG5Q96IX5 58 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 GAFA1Q96PS6 74 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 AQP10Q96PS8 301 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 DSCR8Q96T75 97 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 FAM103A1Q9BTL3 118 aaKnown RBP0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 NPVFQ9HCQ7 196 aa0.61□□□□□ -2.31
TRAPPC13-204ENST00000438419 FXYD6-FXYD2A0A087WZ82 144 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 TRBV7-1A0A0A6YYK4 115 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 FAM223BA6NKX1 122 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 NDUFA3O95167 84 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 PRH1P02810 166 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 SAA2P0DJI9 122 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 CCL3L1P16619 93 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 S100A1P23297 94 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 S100A10P60903 97 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 PRCDQ00LT1 54 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 KLK9Q2XQG4 91 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 RPL39P5Q59GN2 51 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 FAM223AQ8IWN6 122 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 TTC9CQ8N5M4 171 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 TMEM167AQ8TBQ9 72 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 TRGV9Q99603 122 aa0.6□□□□□ -2.31
TRAPPC13-204ENST00000438419 TCEAL7Q9BRU2 100 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms