RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 PFN2P35080 140 aa2.54□□□□□ -2
LINC01239-202ENST00000436786 FXYD2P54710 66 aa2.54□□□□□ -2
LINC01239-202ENST00000436786 LYRM7Q5U5X0 104 aa2.54□□□□□ -2
LINC01239-202ENST00000436786 LINC01545Q5VT33 79 aa2.54□□□□□ -2
LINC01239-202ENST00000436786 FAM19A1Q7Z5A9 133 aa2.54□□□□□ -2
LINC01239-202ENST00000436786 SPANXDQ9BXN6 97 aa2.54□□□□□ -2
LINC01239-202ENST00000436786 NHP2Q9NX24 153 aaKnown RBP2.54□□□□□ -2
LINC01239-202ENST00000436786 LINC01546A6NGU7 62 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 K7ERJ3 54 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 CEND1Q8N111 149 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 SND1-IT1Q9HBX3 110 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 M0R378 163 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 VPREB1P12018 145 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 Q8NDZ9 215 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 CHCHD1Q96BP2 118 aaKnown RBP2.53□□□□□ -2
LINC01239-202ENST00000436786 PLEKHB2Q96CS7 222 aa2.53□□□□□ -2
LINC01239-202ENST00000436786 IGLV5-39A0A0G2JS06 123 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 TRACP01848 142 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 SCGB1C2P0DMR2 95 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 HIGD1BQ9P298 99 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 LINC01549A6NIU2 74 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 J3QQQ9 107 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 TMEM258P61165 79 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 ANKRD29Q8N6D5 301 aa2.52□□□□□ -2.01
LINC01239-202ENST00000436786 ZNF625Q96I27 306 aaPredicted RBP2.52□□□□□ -2.01
LINC01239-202ENST00000436786 DPM2O94777 84 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 URB1-AS1Q96HZ7 61 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 SPRR4Q96PI1 79 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 HIGD2AQ9BW72 106 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 ZNF22P17026 224 aaPredicted RBP2.51□□□□□ -2.01
LINC01239-202ENST00000436786 PSMB2P49721 201 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 COX17Q14061 63 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 SPAG11AQ6PDA7 123 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 PCP2Q8IVA1 136 aa2.51□□□□□ -2.01
LINC01239-202ENST00000436786 A0A096LNJ9 63 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 NDUFC2O95298 119 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 COX7CP15954 63 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 CD164Q04900 197 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 KRTAP13-3Q3SY46 172 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 LINC00337Q8N6G1 96 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 DAND5Q8N907 189 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 Q8NBF4 154 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 DSCR8Q96T75 97 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 IMUPQ9GZP8 106 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 FP248Q71RG6 208 aaPredicted RBP2.5□□□□□ -2.01
LINC01239-202ENST00000436786 KRTAP4-1Q9BYQ7 146 aa2.5□□□□□ -2.01
LINC01239-202ENST00000436786 LOC107984156A0A0G2JMH3 177 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 hADV29S1A0JD25 119 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 C11orf86A6NJI1 115 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 IGKCP01834 107 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 LINC00158P58513 81 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 ASB16-AS1Q495Z4 193 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 TMEM170BQ5T4T1 132 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 ARL17AQ8IVW1 177 aa2.49□□□□□ -2.01
LINC01239-202ENST00000436786 MYMXA0A1B0GTQ4 84 aa2.48□□□□□ -2.01
LINC01239-202ENST00000436786 LINC01547P58512 204 aaPredicted RBP2.48□□□□□ -2.01
LINC01239-202ENST00000436786 SMCR5Q8TEV8 140 aa2.48□□□□□ -2.01
LINC01239-202ENST00000436786 ZNF706Q9Y5V0 76 aaPredicted RBP2.48□□□□□ -2.01
LINC01239-202ENST00000436786 NCR3O14931 201 aa2.48□□□□□ -2.01
LINC01239-202ENST00000436786 TCL1BO95988 128 aa2.48□□□□□ -2.01
LINC01239-202ENST00000436786 HBDP02042 147 aa2.48□□□□□ -2.01
LINC01239-202ENST00000436786 SFTA2Q6UW10 78 aa2.48□□□□□ -2.01
LINC01239-202ENST00000436786 BRK1Q8WUW1 75 aa2.48□□□□□ -2.01
LINC01239-202ENST00000436786 PRYO14603 147 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 SLC25A20O43772 301 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 SPINK1P00995 79 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 HIST1H4GQ99525 98 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 KCNQ1DNQ9H478 68 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 TMEM223A0PJW6 202 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 KRTAP4-16G5E9R7 235 aaPredicted RBP2.47□□□□□ -2.01
LINC01239-202ENST00000436786 SPRR1AP35321 89 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 SEC61BP60468 96 aaKnown RBP2.47□□□□□ -2.01
LINC01239-202ENST00000436786 HERVK_113P61574 105 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
LINC01239-202ENST00000436786 FAM240AA0A1B0GVK7 77 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 ETDCA0A1B0GVM5 59 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 ERC2-IT1O76042 136 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
LINC01239-202ENST00000436786 IGLV9-49A0A0B4J1Y8 123 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 TRBV10-3A0A0K0K1G6 114 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 TEX49A0A1B0GTD5 131 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 ATOX1O00244 68 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 MOBPQ13875 183 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 Q8N377 158 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 MIR7-3HGQ8N6C7 128 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 TTTY13Q9BZ97 58 aa2.46□□□□□ -2.02
LINC01239-202ENST00000436786 SMIM26A0A096LP01 95 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 H3BT86 120 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 NPC2P61916 151 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 CYSTM1Q9H1C7 97 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 NDUFA12Q9UI09 145 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 TRAV12-1A0A0B4J245 112 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 RPS29P62273 56 aaKnown RBP2.45□□□□□ -2.02
LINC01239-202ENST00000436786 SSBP3-AS1Q7Z2R9 100 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 IFI27L1Q96BM0 104 aa2.45□□□□□ -2.02
LINC01239-202ENST00000436786 Q9BRP9 147 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms