RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 OCR1Q9BZK8 76 aa11.62□□□□□ -0.55
CLK1-205ENST00000434813 SNURFQ9Y675 71 aa11.62□□□□□ -0.55
CLK1-205ENST00000434813 H0Y9J4 135 aa11.62□□□□□ -0.55
CLK1-205ENST00000434813 KRTAP11-1Q8IUC1 163 aa11.62□□□□□ -0.55
CLK1-205ENST00000434813 FAM236DA0A1B0GTK5 79 aa11.61□□□□□ -0.55
CLK1-205ENST00000434813 FAM236CP0DP71 79 aa11.61□□□□□ -0.55
CLK1-205ENST00000434813 Q6ZRN7 208 aaPredicted RBP11.61□□□□□ -0.55
CLK1-205ENST00000434813 PLECQ15149 4684 aaKnown RBP11.6□□□□□ -0.55
CLK1-205ENST00000434813 DSCR10P59022 87 aa11.59□□□□□ -0.55
CLK1-205ENST00000434813 LINC00474Q9P2X8 69 aa11.59□□□□□ -0.55
CLK1-205ENST00000434813 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
CLK1-205ENST00000434813 NDUFC1O43677 76 aa11.58□□□□□ -0.56
CLK1-205ENST00000434813 SPRR1BP22528 89 aa11.57□□□□□ -0.56
CLK1-205ENST00000434813 TMEM254Q8TBM7 123 aa11.57□□□□□ -0.56
CLK1-205ENST00000434813 STARD9Q9P2P6 4700 aa11.57□□□□□ -0.56
CLK1-205ENST00000434813 UBE2AP49459 152 aa11.56□□□□□ -0.56
CLK1-205ENST00000434813 OXTP01178 125 aa11.55□□□□□ -0.56
CLK1-205ENST00000434813 A0A0G2JQZ4 141 aa11.55□□□□□ -0.56
CLK1-205ENST00000434813 WWC2-AS2Q96NR7 200 aa11.55□□□□□ -0.56
CLK1-205ENST00000434813 K7EQZ3 153 aa11.53□□□□□ -0.56
CLK1-205ENST00000434813 PANO1I0J062 215 aa11.51□□□□□ -0.57
CLK1-205ENST00000434813 SVIPQ8NHG7 77 aa11.51□□□□□ -0.57
CLK1-205ENST00000434813 A0A087WSZ3 146 aa11.5□□□□□ -0.57
CLK1-205ENST00000434813 A0A0U1RQV1 116 aa11.5□□□□□ -0.57
CLK1-205ENST00000434813 VPS13DQ5THJ4 4388 aa11.49□□□□□ -0.57
CLK1-205ENST00000434813 KRTAP13-1Q8IUC0 172 aa11.48□□□□□ -0.57
CLK1-205ENST00000434813 SPACA4Q8TDM5 124 aa11.48□□□□□ -0.57
CLK1-205ENST00000434813 SERP1Q9Y6X1 66 aa11.47□□□□□ -0.57
CLK1-205ENST00000434813 LCE6AA0A183 80 aa11.46□□□□□ -0.57
CLK1-205ENST00000434813 ATP5EP56381 51 aaPredicted RBP11.46□□□□□ -0.57
CLK1-205ENST00000434813 FAM30AQ9NZY2 134 aa11.46□□□□□ -0.57
CLK1-205ENST00000434813 HCG22E2RYF7 251 aa11.45□□□□□ -0.58
CLK1-205ENST00000434813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.44□□□□□ -0.58
CLK1-205ENST00000434813 A0A087WTM6 91 aa11.43□□□□□ -0.58
CLK1-205ENST00000434813 LY6G6CO95867 125 aa11.41□□□□□ -0.58
CLK1-205ENST00000434813 DEFB116Q30KQ4 102 aa11.4□□□□□ -0.58
CLK1-205ENST00000434813 Q6ZR54 194 aa11.4□□□□□ -0.58
CLK1-205ENST00000434813 RTL8CO15255 209 aa11.35□□□□□ -0.59
CLK1-205ENST00000434813 C1orf134Q5TEV5 83 aa11.35□□□□□ -0.59
CLK1-205ENST00000434813 Q5XG85 94 aa11.35□□□□□ -0.59
CLK1-205ENST00000434813 SRRM2Q9UQ35 2752 aaKnown RBP11.35□□□□□ -0.59
CLK1-205ENST00000434813 KMT2AQ03164 3969 aa11.35□□□□□ -0.59
CLK1-205ENST00000434813 LINC00472Q9H8W2 130 aa11.35□□□□□ -0.59
CLK1-205ENST00000434813 RPL37AP61513 92 aaKnown RBP11.33□□□□□ -0.6
CLK1-205ENST00000434813 ZCCHC13Q8WW36 166 aaKnown RBP11.33□□□□□ -0.6
CLK1-205ENST00000434813 C5orf47Q569G3 176 aa11.32□□□□□ -0.6
CLK1-205ENST00000434813 LINC00483Q53H64 154 aa11.31□□□□□ -0.6
CLK1-205ENST00000434813 WFDC13Q8IUB5 93 aa11.31□□□□□ -0.6
CLK1-205ENST00000434813 A8MWP4 228 aa11.31□□□□□ -0.6
CLK1-205ENST00000434813 KRTAP29-1A8MX34 341 aaPredicted RBP11.31□□□□□ -0.6
CLK1-205ENST00000434813 PRR15Q8IV56 129 aa11.31□□□□□ -0.6
CLK1-205ENST00000434813 DNAH17Q9UFH2 4485 aa11.29□□□□□ -0.6
CLK1-205ENST00000434813 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
CLK1-205ENST00000434813 ZNF706Q9Y5V0 76 aaPredicted RBP11.28□□□□□ -0.6
CLK1-205ENST00000434813 DNAH2Q9P225 4427 aa11.28□□□□□ -0.6
CLK1-205ENST00000434813 IGLV5-52A0A0A0MRZ9 124 aa11.28□□□□□ -0.6
CLK1-205ENST00000434813 PSORS1C2Q9UIG4 136 aa11.26□□□□□ -0.61
CLK1-205ENST00000434813 HECTD4Q9Y4D8 3996 aa11.26□□□□□ -0.61
CLK1-205ENST00000434813 SMIM26A0A096LP01 95 aa11.26□□□□□ -0.61
CLK1-205ENST00000434813 IGLV9-49A0A0B4J1Y8 123 aa11.26□□□□□ -0.61
CLK1-205ENST00000434813 C4orf26Q17RF5 130 aa11.25□□□□□ -0.61
CLK1-205ENST00000434813 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
CLK1-205ENST00000434813 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.62
CLK1-205ENST00000434813 ZNF861PO60384 105 aa11.2□□□□□ -0.62
CLK1-205ENST00000434813 MP68P56378 58 aa11.2□□□□□ -0.62
CLK1-205ENST00000434813 Q96NJ1 140 aa11.19□□□□□ -0.62
CLK1-205ENST00000434813 MMP24-AS1A0A0U1RRL7 71 aa11.18□□□□□ -0.62
CLK1-205ENST00000434813 HRCT1Q6UXD1 115 aa11.18□□□□□ -0.62
CLK1-205ENST00000434813 DNAH8Q96JB1 4490 aa11.17□□□□□ -0.62
CLK1-205ENST00000434813 NDUFB1O75438 58 aa11.16□□□□□ -0.62
CLK1-205ENST00000434813 MOBPQ13875 183 aa11.15□□□□□ -0.62
CLK1-205ENST00000434813 ALMS1Q8TCU4 4167 aa11.15□□□□□ -0.63
CLK1-205ENST00000434813 DNAH6Q9C0G6 4158 aa11.15□□□□□ -0.63
CLK1-205ENST00000434813 H3BPC8 53 aa11.14□□□□□ -0.63
CLK1-205ENST00000434813 TRAV22A0A0B4J277 110 aa11.13□□□□□ -0.63
CLK1-205ENST00000434813 FAM229BQ4G0N7 80 aa11.13□□□□□ -0.63
CLK1-205ENST00000434813 H0Y9P7 68 aa11.13□□□□□ -0.63
CLK1-205ENST00000434813 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
CLK1-205ENST00000434813 CYP4F30PQ9H0H9 118 aa11.11□□□□□ -0.63
CLK1-205ENST00000434813 hDV103S1A0JD37 113 aa11.1□□□□□ -0.63
CLK1-205ENST00000434813 ASB16-AS1Q495Z4 193 aa11.1□□□□□ -0.63
CLK1-205ENST00000434813 ANAPC11Q9NYG5 84 aa11.1□□□□□ -0.63
CLK1-205ENST00000434813 IGLV7-43P04211 117 aa11.09□□□□□ -0.63
CLK1-205ENST00000434813 KMT2CQ8NEZ4 4911 aaKnown RBP11.06□□□□□ -0.64
CLK1-205ENST00000434813 FRAS1Q86XX4 4008 aa11.06□□□□□ -0.64
CLK1-205ENST00000434813 C1orf64Q8NEQ6 169 aa11.06□□□□□ -0.64
CLK1-205ENST00000434813 C8orf17Q9NRJ1 99 aa11.06□□□□□ -0.64
CLK1-205ENST00000434813 A0A1B0GVX0 72 aa11.04□□□□□ -0.64
CLK1-205ENST00000434813 KRTAP10-2P60368 255 aa11.04□□□□□ -0.64
CLK1-205ENST00000434813 SPANXA2-OT1Q8N9U9 137 aa11.02□□□□□ -0.65
CLK1-205ENST00000434813 TP53AIP1Q9HCN2 124 aa11.01□□□□□ -0.65
CLK1-205ENST00000434813 HYDINQ4G0P3 5121 aa11□□□□□ -0.65
CLK1-205ENST00000434813 SACSQ9NZJ4 4579 aa11□□□□□ -0.65
CLK1-205ENST00000434813 CDK2AP2O75956 126 aa11□□□□□ -0.65
CLK1-205ENST00000434813 PRR4Q16378 134 aa11□□□□□ -0.65
CLK1-205ENST00000434813 IGHV6-1A0A0B4J1U7 121 aa10.99□□□□□ -0.65
CLK1-205ENST00000434813 CIRBP-AS1Q8TBR5 109 aa10.99□□□□□ -0.65
CLK1-205ENST00000434813 DNAH5Q8TE73 4624 aa10.99□□□□□ -0.65
CLK1-205ENST00000434813 MPLKIPQ8TAP9 179 aa10.98□□□□□ -0.65
CLK1-205ENST00000434813 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms