RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.74
PKP4-205ENST00000426248 PRR34Q9NV39 138 aa10.39□□□□□ -0.75
PKP4-205ENST00000426248 IGLV9-49A0A0B4J1Y8 123 aa10.39□□□□□ -0.75
PKP4-205ENST00000426248 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
PKP4-205ENST00000426248 H0Y9P7 68 aa10.36□□□□□ -0.75
PKP4-205ENST00000426248 PRLHP81277 87 aa10.35□□□□□ -0.75
PKP4-205ENST00000426248 SPAG11AQ6PDA7 123 aa10.35□□□□□ -0.75
PKP4-205ENST00000426248 PCOTHQ58A44 107 aa10.35□□□□□ -0.75
PKP4-205ENST00000426248 A0A0G2JQZ4 141 aa10.35□□□□□ -0.75
PKP4-205ENST00000426248 A0A1W2PNN7 141 aa10.35□□□□□ -0.75
PKP4-205ENST00000426248 ATP11AUNQ6ZP68 121 aa10.34□□□□□ -0.75
PKP4-205ENST00000426248 FLG2Q5D862 2391 aaPredicted RBP10.34□□□□□ -0.75
PKP4-205ENST00000426248 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
PKP4-205ENST00000426248 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
PKP4-205ENST00000426248 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
PKP4-205ENST00000426248 C14orf177Q52M58 125 aa10.32□□□□□ -0.76
PKP4-205ENST00000426248 TGP01266 2768 aa10.32□□□□□ -0.76
PKP4-205ENST00000426248 VPREB1P12018 145 aa10.31□□□□□ -0.76
PKP4-205ENST00000426248 NBDYA0A0U1RRE5 68 aa10.3□□□□□ -0.76
PKP4-205ENST00000426248 A0A1W2PNM2 257 aa10.3□□□□□ -0.76
PKP4-205ENST00000426248 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
PKP4-205ENST00000426248 Q8N377 158 aa10.3□□□□□ -0.76
PKP4-205ENST00000426248 TENM2Q9NT68 2774 aa10.3□□□□□ -0.76
PKP4-205ENST00000426248 Q8N9P0 234 aaPredicted RBP10.3□□□□□ -0.76
PKP4-205ENST00000426248 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
PKP4-205ENST00000426248 CYP4F30PQ9H0H9 118 aa10.29□□□□□ -0.76
PKP4-205ENST00000426248 Q8NBF4 154 aa10.28□□□□□ -0.76
PKP4-205ENST00000426248 WWC2-AS2Q96NR7 200 aa10.28□□□□□ -0.76
PKP4-205ENST00000426248 SRRM2Q9UQ35 2752 aaKnown RBP10.28□□□□□ -0.76
PKP4-205ENST00000426248 A0A087WSZ3 146 aa10.28□□□□□ -0.76
PKP4-205ENST00000426248 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
PKP4-205ENST00000426248 C15orf56Q8N910 161 aa10.27□□□□□ -0.77
PKP4-205ENST00000426248 DSCR10P59022 87 aa10.26□□□□□ -0.77
PKP4-205ENST00000426248 CASC2Q6XLA1 102 aa10.25□□□□□ -0.77
PKP4-205ENST00000426248 LCA10Q71F78 164 aa10.25□□□□□ -0.77
PKP4-205ENST00000426248 COA5Q86WW8 74 aa10.25□□□□□ -0.77
PKP4-205ENST00000426248 C1orf134Q5TEV5 83 aa10.24□□□□□ -0.77
PKP4-205ENST00000426248 H3BS24 57 aa10.23□□□□□ -0.77
PKP4-205ENST00000426248 DHRS4-AS1Q9P1J3 65 aa10.23□□□□□ -0.77
PKP4-205ENST00000426248 LOC101927531A0A1B0GV80 90 aa10.22□□□□□ -0.77
PKP4-205ENST00000426248 C7orf33Q8WU49 177 aa10.22□□□□□ -0.77
PKP4-205ENST00000426248 GVQW2A0A096LPI5 108 aaPredicted RBP10.21□□□□□ -0.77
PKP4-205ENST00000426248 PRAC1Q96KF2 57 aa10.21□□□□□ -0.77
PKP4-205ENST00000426248 ZCCHC13Q8WW36 166 aaKnown RBP10.21□□□□□ -0.78
PKP4-205ENST00000426248 CHTF8P0CG12 524 aa10.2□□□□□ -0.78
PKP4-205ENST00000426248 FAM168BA1KXE4 195 aa10.19□□□□□ -0.78
PKP4-205ENST00000426248 KRTAP1-5Q9BYS1 174 aa10.19□□□□□ -0.78
PKP4-205ENST00000426248 CDC42SE1Q9NRR8 79 aa10.18□□□□□ -0.78
PKP4-205ENST00000426248 C8orf87E5RJ46 101 aa10.16□□□□□ -0.78
PKP4-205ENST00000426248 IGLV5-48A0A075B6I7 105 aa10.15□□□□□ -0.78
PKP4-205ENST00000426248 LINC00476Q8WZB0 136 aa10.15□□□□□ -0.78
PKP4-205ENST00000426248 SERTAD4-AS1Q5TG53 156 aa10.15□□□□□ -0.78
PKP4-205ENST00000426248 Q75L30 129 aa10.14□□□□□ -0.79
PKP4-205ENST00000426248 IGLV5-52A0A0A0MRZ9 124 aa10.13□□□□□ -0.79
PKP4-205ENST00000426248 MOBPQ13875 183 aa10.13□□□□□ -0.79
PKP4-205ENST00000426248 Q6ZRX8 168 aa10.13□□□□□ -0.79
PKP4-205ENST00000426248 A6NN06 94 aa10.11□□□□□ -0.79
PKP4-205ENST00000426248 CIRBP-AS1Q8TBR5 109 aa10.11□□□□□ -0.79
PKP4-205ENST00000426248 KRTAP26-1Q6PEX3 210 aa10.1□□□□□ -0.79
PKP4-205ENST00000426248 KCNQ1DNQ9H478 68 aa10.1□□□□□ -0.79
PKP4-205ENST00000426248 PHF5AQ7RTV0 110 aaKnown RBP10.09□□□□□ -0.79
PKP4-205ENST00000426248 LCE6AA0A183 80 aa10.09□□□□□ -0.79
PKP4-205ENST00000426248 A0A1B0GW54 56 aa10.08□□□□□ -0.8
PKP4-205ENST00000426248 SPINK7P58062 85 aa10.08□□□□□ -0.8
PKP4-205ENST00000426248 IGHV6-1A0A0B4J1U7 121 aa10.08□□□□□ -0.8
PKP4-205ENST00000426248 Q9BRP9 147 aa10.07□□□□□ -0.8
PKP4-205ENST00000426248 LINC00313P59037 77 aa10.06□□□□□ -0.8
PKP4-205ENST00000426248 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
PKP4-205ENST00000426248 KRTAP21-3Q3LHN1 58 aa10.06□□□□□ -0.8
PKP4-205ENST00000426248 REG3GQ6UW15 175 aa10.05□□□□□ -0.8
PKP4-205ENST00000426248 IGFL1Q6UW32 110 aa10.04□□□□□ -0.8
PKP4-205ENST00000426248 A0A087WTM6 91 aa10.04□□□□□ -0.8
PKP4-205ENST00000426248 RTL8CO15255 209 aa10.04□□□□□ -0.8
PKP4-205ENST00000426248 FBN3Q75N90 2809 aa10.02□□□□□ -0.81
PKP4-205ENST00000426248 H3BPC8 53 aa10.01□□□□□ -0.81
PKP4-205ENST00000426248 SPRR4Q96PI1 79 aa10.01□□□□□ -0.81
PKP4-205ENST00000426248 SPINK1P00995 79 aa10□□□□□ -0.81
PKP4-205ENST00000426248 ANAPC11Q9NYG5 84 aa10□□□□□ -0.81
PKP4-205ENST00000426248 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
PKP4-205ENST00000426248 C9orf163Q8N9P6 203 aa9.98□□□□□ -0.81
PKP4-205ENST00000426248 TNP2Q05952 138 aa9.97□□□□□ -0.81
PKP4-205ENST00000426248 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
PKP4-205ENST00000426248 MEGF8Q7Z7M0 2845 aa9.96□□□□□ -0.81
PKP4-205ENST00000426248 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
PKP4-205ENST00000426248 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
PKP4-205ENST00000426248 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
PKP4-205ENST00000426248 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
PKP4-205ENST00000426248 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
PKP4-205ENST00000426248 IGLV7-46A0A075B6I9 117 aa9.92□□□□□ -0.82
PKP4-205ENST00000426248 A8MWP4 228 aa9.91□□□□□ -0.82
PKP4-205ENST00000426248 COL7A1Q02388 2944 aa9.9□□□□□ -0.82
PKP4-205ENST00000426248 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
PKP4-205ENST00000426248 A0A1B0GU69 56 aa9.83□□□□□ -0.84
PKP4-205ENST00000426248 HRES1P13985 223 aa9.83□□□□□ -0.84
PKP4-205ENST00000426248 SPACA4Q8TDM5 124 aa9.83□□□□□ -0.84
PKP4-205ENST00000426248 KRTAP29-1A8MX34 341 aaPredicted RBP9.83□□□□□ -0.84
PKP4-205ENST00000426248 Q6ZR54 194 aa9.83□□□□□ -0.84
PKP4-205ENST00000426248 DNHD1Q96M86 4753 aa9.82□□□□□ -0.84
PKP4-205ENST00000426248 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
PKP4-205ENST00000426248 IGKV2D-30A0A075B6S6 120 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms