RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 COX7BP24311 80 aa9.52□□□□□ -0.89
MSH6-203ENST00000420813 C6orf99Q4VX62 202 aa9.52□□□□□ -0.89
MSH6-203ENST00000420813 K7ERJ3 54 aa9.5□□□□□ -0.89
MSH6-203ENST00000420813 TAX1BP3O14907 124 aa9.5□□□□□ -0.89
MSH6-203ENST00000420813 CD164Q04900 197 aa9.5□□□□□ -0.89
MSH6-203ENST00000420813 HRCT1Q6UXD1 115 aa9.5□□□□□ -0.89
MSH6-203ENST00000420813 MUSTN1Q8IVN3 82 aa9.5□□□□□ -0.89
MSH6-203ENST00000420813 A0A1B0GV90 55 aa9.49□□□□□ -0.89
MSH6-203ENST00000420813 A0A0B4J2C4 111 aa9.48□□□□□ -0.89
MSH6-203ENST00000420813 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
MSH6-203ENST00000420813 A4D1N5 150 aa9.48□□□□□ -0.89
MSH6-203ENST00000420813 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
MSH6-203ENST00000420813 Q1RN00 199 aa9.46□□□□□ -0.9
MSH6-203ENST00000420813 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
MSH6-203ENST00000420813 RAB37Q96AX2 223 aa9.46□□□□□ -0.9
MSH6-203ENST00000420813 C9orf118A6NHY6 69 aa9.45□□□□□ -0.9
MSH6-203ENST00000420813 LCE2CQ5TA81 110 aa9.45□□□□□ -0.9
MSH6-203ENST00000420813 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
MSH6-203ENST00000420813 Q5XG85 94 aa9.44□□□□□ -0.9
MSH6-203ENST00000420813 DEFB105AQ8NG35 78 aa9.44□□□□□ -0.9
MSH6-203ENST00000420813 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
MSH6-203ENST00000420813 H7C2G1 150 aa9.43□□□□□ -0.9
MSH6-203ENST00000420813 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
MSH6-203ENST00000420813 CFC1P0CG37 223 aa9.43□□□□□ -0.9
MSH6-203ENST00000420813 IGLV5-48A0A075B6I7 105 aa9.42□□□□□ -0.9
MSH6-203ENST00000420813 KRTAP19-2Q3LHN2 52 aa9.42□□□□□ -0.9
MSH6-203ENST00000420813 SMIM29Q86T20 159 aa9.42□□□□□ -0.9
MSH6-203ENST00000420813 PRO1854Q9UHT4 67 aa9.42□□□□□ -0.9
MSH6-203ENST00000420813 IGLV8-61A0A075B6I0 122 aa9.41□□□□□ -0.9
MSH6-203ENST00000420813 H3BUT2 72 aa9.41□□□□□ -0.9
MSH6-203ENST00000420813 LYRM7Q5U5X0 104 aa9.4□□□□□ -0.9
MSH6-203ENST00000420813 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
MSH6-203ENST00000420813 FABP2P12104 132 aa9.39□□□□□ -0.91
MSH6-203ENST00000420813 VAMP3Q15836 100 aa9.38□□□□□ -0.91
MSH6-203ENST00000420813 NAA38Q9BRA0 125 aaKnown RBP9.38□□□□□ -0.91
MSH6-203ENST00000420813 C1orf195Q5TG92 126 aa9.37□□□□□ -0.91
MSH6-203ENST00000420813 TRAV13-2A0A0B4J235 113 aa9.35□□□□□ -0.91
MSH6-203ENST00000420813 MT1HP80294 61 aa9.35□□□□□ -0.91
MSH6-203ENST00000420813 K7EP34 96 aa9.34□□□□□ -0.91
MSH6-203ENST00000420813 GTF2H5Q6ZYL4 71 aa9.34□□□□□ -0.91
MSH6-203ENST00000420813 SPCS1Q9Y6A9 102 aa9.34□□□□□ -0.91
MSH6-203ENST00000420813 PSMB2P49721 201 aa9.32□□□□□ -0.92
MSH6-203ENST00000420813 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
MSH6-203ENST00000420813 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
MSH6-203ENST00000420813 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
MSH6-203ENST00000420813 TCL1BO95988 128 aa9.29□□□□□ -0.92
MSH6-203ENST00000420813 UBE2V1Q13404 147 aa9.29□□□□□ -0.92
MSH6-203ENST00000420813 TRIAP1O43715 76 aa9.28□□□□□ -0.92
MSH6-203ENST00000420813 COX6CP09669 75 aa9.28□□□□□ -0.92
MSH6-203ENST00000420813 TRBV20-1A0A075B6N2 111 aa9.27□□□□□ -0.93
MSH6-203ENST00000420813 F8WEM9 126 aa9.27□□□□□ -0.93
MSH6-203ENST00000420813 CRCT1Q9UGL9 99 aa9.27□□□□□ -0.93
MSH6-203ENST00000420813 FSIP2Q5CZC0 6907 aa9.26□□□□□ -0.93
MSH6-203ENST00000420813 SCGB1C2P0DMR2 95 aa9.26□□□□□ -0.93
MSH6-203ENST00000420813 LINC00575Q6W349 94 aa9.24□□□□□ -0.93
MSH6-203ENST00000420813 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
MSH6-203ENST00000420813 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
MSH6-203ENST00000420813 Q6JHZ5 121 aa9.22□□□□□ -0.93
MSH6-203ENST00000420813 Q6ZQY7 126 aa9.21□□□□□ -0.94
MSH6-203ENST00000420813 hADV29S1A0JD25 119 aa9.2□□□□□ -0.94
MSH6-203ENST00000420813 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
MSH6-203ENST00000420813 CLEC2BQ92478 149 aa9.2□□□□□ -0.94
MSH6-203ENST00000420813 H3BMG7 143 aa9.19□□□□□ -0.94
MSH6-203ENST00000420813 TRBV7-7A0A0K0K1E9 115 aa9.18□□□□□ -0.94
MSH6-203ENST00000420813 LST1O00453 97 aa9.18□□□□□ -0.94
MSH6-203ENST00000420813 COX6B2Q6YFQ2 88 aa9.18□□□□□ -0.94
MSH6-203ENST00000420813 H0YGX0 51 aa9.16□□□□□ -0.94
MSH6-203ENST00000420813 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
MSH6-203ENST00000420813 M0R2T5 61 aa9.15□□□□□ -0.94
MSH6-203ENST00000420813 OCIAD2Q56VL3 154 aa9.15□□□□□ -0.94
MSH6-203ENST00000420813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
MSH6-203ENST00000420813 PPDPFLQ8WWR9 84 aa9.15□□□□□ -0.94
MSH6-203ENST00000420813 F8W1H4 67 aa9.14□□□□□ -0.95
MSH6-203ENST00000420813 TRACP01848 142 aa9.14□□□□□ -0.95
MSH6-203ENST00000420813 FLGP20930 4061 aaPredicted RBP9.14□□□□□ -0.95
MSH6-203ENST00000420813 PRO0461Q9UI25 63 aa9.13□□□□□ -0.95
MSH6-203ENST00000420813 C9JAW5 83 aa9.12□□□□□ -0.95
MSH6-203ENST00000420813 MTURNQ8N3F0 131 aa9.11□□□□□ -0.95
MSH6-203ENST00000420813 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
MSH6-203ENST00000420813 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
MSH6-203ENST00000420813 A0A1B0GX51 115 aa9.1□□□□□ -0.95
MSH6-203ENST00000420813 H3BT86 120 aa9.1□□□□□ -0.95
MSH6-203ENST00000420813 DNAL4O96015 105 aa9.1□□□□□ -0.95
MSH6-203ENST00000420813 Q75L30 129 aa9.1□□□□□ -0.95
MSH6-203ENST00000420813 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
MSH6-203ENST00000420813 SNCGO76070 127 aa9.08□□□□□ -0.96
MSH6-203ENST00000420813 ATP11AUNQ6ZP68 121 aa9.08□□□□□ -0.96
MSH6-203ENST00000420813 OBSCN-AS1Q96MR7 158 aa9.08□□□□□ -0.96
MSH6-203ENST00000420813 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
MSH6-203ENST00000420813 ANKRD29Q8N6D5 301 aa9.05□□□□□ -0.96
MSH6-203ENST00000420813 Q6Q795 121 aa9.03□□□□□ -0.96
MSH6-203ENST00000420813 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
MSH6-203ENST00000420813 SS18L2Q9UHA2 77 aa9.03□□□□□ -0.96
MSH6-203ENST00000420813 ETDBQ3ZM63 59 aa9.01□□□□□ -0.97
MSH6-203ENST00000420813 ORMDL1Q9P0S3 153 aa9.01□□□□□ -0.97
MSH6-203ENST00000420813 Q96NJ1 140 aa8.99□□□□□ -0.97
MSH6-203ENST00000420813 H3BQ85 93 aa8.97□□□□□ -0.97
MSH6-203ENST00000420813 BAALC-AS2P0C853 105 aa8.97□□□□□ -0.97
MSH6-203ENST00000420813 C20orf166-AS1Q96NR2 134 aa8.97□□□□□ -0.97
MSH6-203ENST00000420813 K7ERU9 68 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms