RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 JOSD1Q15040 202 aaPredicted RBP3.98□□□□□ -1.77
HMGN1-205ENST00000419378 OR13C6PQ8NH95 151 aa3.98□□□□□ -1.77
HMGN1-205ENST00000419378 CBY1Q9Y3M2 126 aa3.98□□□□□ -1.77
HMGN1-205ENST00000419378 RETNLBQ9BQ08 111 aa3.97□□□□□ -1.77
HMGN1-205ENST00000419378 IFITM1P13164 125 aa3.96□□□□□ -1.78
HMGN1-205ENST00000419378 HINT1P49773 126 aaPredicted RBP3.96□□□□□ -1.78
HMGN1-205ENST00000419378 CTAG1AP78358 180 aa3.96□□□□□ -1.78
HMGN1-205ENST00000419378 SPAG11AQ6PDA7 123 aa3.96□□□□□ -1.78
HMGN1-205ENST00000419378 Q6ZVH6 145 aa3.96□□□□□ -1.78
HMGN1-205ENST00000419378 ST20-AS1Q8NBB2 130 aa3.96□□□□□ -1.78
HMGN1-205ENST00000419378 COPS9Q8WXC6 57 aa3.96□□□□□ -1.78
HMGN1-205ENST00000419378 HSBP1L1C9JCN9 74 aa3.95□□□□□ -1.78
HMGN1-205ENST00000419378 ELOF1P60002 83 aaKnown RBP3.95□□□□□ -1.78
HMGN1-205ENST00000419378 MOBPQ13875 183 aa3.95□□□□□ -1.78
HMGN1-205ENST00000419378 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
HMGN1-205ENST00000419378 MUSTN1Q8IVN3 82 aa3.95□□□□□ -1.78
HMGN1-205ENST00000419378 COX7BP24311 80 aa3.94□□□□□ -1.78
HMGN1-205ENST00000419378 DHRS4-AS1Q9P1J3 65 aa3.94□□□□□ -1.78
HMGN1-205ENST00000419378 A6NDN8 102 aa3.93□□□□□ -1.78
HMGN1-205ENST00000419378 SPINK1P00995 79 aa3.93□□□□□ -1.78
HMGN1-205ENST00000419378 C9orf153Q5TBE3 101 aa3.93□□□□□ -1.78
HMGN1-205ENST00000419378 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
HMGN1-205ENST00000419378 MUC2Q02817 5179 aa3.92□□□□□ -1.78
HMGN1-205ENST00000419378 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
HMGN1-205ENST00000419378 SPRR1BP22528 89 aa3.92□□□□□ -1.78
HMGN1-205ENST00000419378 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
HMGN1-205ENST00000419378 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
HMGN1-205ENST00000419378 TRAV13-2A0A0B4J235 113 aa3.91□□□□□ -1.78
HMGN1-205ENST00000419378 A0A1B0GWB2 263 aa3.91□□□□□ -1.78
HMGN1-205ENST00000419378 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
HMGN1-205ENST00000419378 TPRXLQ17RH7 258 aa3.91□□□□□ -1.78
HMGN1-205ENST00000419378 FP248Q71RG6 208 aaPredicted RBP3.91□□□□□ -1.78
HMGN1-205ENST00000419378 COX8AP10176 69 aa3.9□□□□□ -1.79
HMGN1-205ENST00000419378 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
HMGN1-205ENST00000419378 SLC25A34Q6PIV7 304 aa3.9□□□□□ -1.79
HMGN1-205ENST00000419378 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
HMGN1-205ENST00000419378 DEFB105AQ8NG35 78 aa3.89□□□□□ -1.79
HMGN1-205ENST00000419378 LAMTOR3Q9UHA4 124 aa3.89□□□□□ -1.79
HMGN1-205ENST00000419378 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 IGLV5-48A0A075B6I7 105 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 TEX49A0A1B0GTD5 131 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 DLEU1O43261 78 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 TAL2Q16559 108 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 Q1RN00 199 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 HIST1H4GQ99525 98 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 C12orf57Q99622 126 aa3.88□□□□□ -1.79
HMGN1-205ENST00000419378 SLC25A20O43772 301 aa3.87□□□□□ -1.79
HMGN1-205ENST00000419378 DSCR10P59022 87 aa3.87□□□□□ -1.79
HMGN1-205ENST00000419378 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
HMGN1-205ENST00000419378 SPATA45Q537H7 98 aa3.87□□□□□ -1.79
HMGN1-205ENST00000419378 C14orf144Q96I85 54 aa3.87□□□□□ -1.79
HMGN1-205ENST00000419378 VAMP8Q9BV40 100 aa3.87□□□□□ -1.79
HMGN1-205ENST00000419378 NHP2Q9NX24 153 aaKnown RBP3.87□□□□□ -1.79
HMGN1-205ENST00000419378 PRO1933Q9H354 126 aa3.86□□□□□ -1.79
HMGN1-205ENST00000419378 VAMP3Q15836 100 aa3.85□□□□□ -1.79
HMGN1-205ENST00000419378 HRCT1Q6UXD1 115 aa3.85□□□□□ -1.79
HMGN1-205ENST00000419378 LINC00575Q6W349 94 aa3.85□□□□□ -1.79
HMGN1-205ENST00000419378 C2orf91Q6ZV80 131 aa3.85□□□□□ -1.79
HMGN1-205ENST00000419378 LIMD2Q9BT23 127 aa3.85□□□□□ -1.79
HMGN1-205ENST00000419378 HIGD1BQ9P298 99 aa3.85□□□□□ -1.79
HMGN1-205ENST00000419378 hADV29S1A0JD25 119 aa3.84□□□□□ -1.79
HMGN1-205ENST00000419378 CD164Q04900 197 aa3.84□□□□□ -1.79
HMGN1-205ENST00000419378 H7C2G1 150 aa3.83□□□□□ -1.8
HMGN1-205ENST00000419378 Q6ZQY7 126 aa3.83□□□□□ -1.8
HMGN1-205ENST00000419378 A0A0B4J2C4 111 aa3.82□□□□□ -1.8
HMGN1-205ENST00000419378 A0A0G2JQZ4 141 aa3.82□□□□□ -1.8
HMGN1-205ENST00000419378 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
HMGN1-205ENST00000419378 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
HMGN1-205ENST00000419378 PYY3Q5JQD4 70 aa3.82□□□□□ -1.8
HMGN1-205ENST00000419378 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
HMGN1-205ENST00000419378 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
HMGN1-205ENST00000419378 A0A0U1RQV1 116 aa3.81□□□□□ -1.8
HMGN1-205ENST00000419378 F8WEM9 126 aa3.81□□□□□ -1.8
HMGN1-205ENST00000419378 Q5XG85 94 aa3.81□□□□□ -1.8
HMGN1-205ENST00000419378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.81□□□□□ -1.8
HMGN1-205ENST00000419378 CEND1Q8N111 149 aa3.81□□□□□ -1.8
HMGN1-205ENST00000419378 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
HMGN1-205ENST00000419378 FXYD2P54710 66 aa3.79□□□□□ -1.8
HMGN1-205ENST00000419378 PPDPFLQ8WWR9 84 aa3.79□□□□□ -1.8
HMGN1-205ENST00000419378 PRO1854Q9UHT4 67 aa3.79□□□□□ -1.8
HMGN1-205ENST00000419378 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 H0YGX0 51 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 HSD52Q0P140 79 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 OCIAD2Q56VL3 154 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 Q6JHZ5 121 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 IGFL1Q6UW32 110 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 CLEC2BQ92478 149 aa3.78□□□□□ -1.8
HMGN1-205ENST00000419378 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
HMGN1-205ENST00000419378 H3BUT2 72 aa3.77□□□□□ -1.81
HMGN1-205ENST00000419378 TCL1BO95988 128 aa3.77□□□□□ -1.81
HMGN1-205ENST00000419378 CXCL6P80162 114 aa3.77□□□□□ -1.81
HMGN1-205ENST00000419378 SNHG12Q9BXW3 62 aa3.77□□□□□ -1.81
HMGN1-205ENST00000419378 TRBV7-7A0A0K0K1E9 115 aa3.76□□□□□ -1.81
HMGN1-205ENST00000419378 K7ERJ3 54 aa3.76□□□□□ -1.81
HMGN1-205ENST00000419378 SNCGO76070 127 aa3.76□□□□□ -1.81
HMGN1-205ENST00000419378 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
HMGN1-205ENST00000419378 UQCR10Q9UDW1 63 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms