RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
LINC00404-201ENST00000418660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.01□□□□□ -0.97
LINC00404-201ENST00000418660 VAMP8Q9BV40 100 aa9.01□□□□□ -0.97
LINC00404-201ENST00000418660 FAT4Q6V0I7 4981 aa9.01□□□□□ -0.97
LINC00404-201ENST00000418660 C9orf92A6NGG3 77 aa9□□□□□ -0.97
LINC00404-201ENST00000418660 CFC1BP0CG36 223 aa9□□□□□ -0.97
LINC00404-201ENST00000418660 CFC1P0CG37 223 aa9□□□□□ -0.97
LINC00404-201ENST00000418660 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
LINC00404-201ENST00000418660 Q6JHZ5 121 aa8.99□□□□□ -0.97
LINC00404-201ENST00000418660 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
LINC00404-201ENST00000418660 TCL1BO95988 128 aa8.98□□□□□ -0.97
LINC00404-201ENST00000418660 C2orf91Q6ZV80 131 aa8.98□□□□□ -0.97
LINC00404-201ENST00000418660 PPDPFLQ8WWR9 84 aa8.98□□□□□ -0.97
LINC00404-201ENST00000418660 A0A0B4J2C4 111 aa8.97□□□□□ -0.97
LINC00404-201ENST00000418660 OCIAD2Q56VL3 154 aa8.97□□□□□ -0.97
LINC00404-201ENST00000418660 IGFL1Q6UW32 110 aa8.95□□□□□ -0.98
LINC00404-201ENST00000418660 CLEC2BQ92478 149 aa8.95□□□□□ -0.98
LINC00404-201ENST00000418660 H0YGX0 51 aa8.94□□□□□ -0.98
LINC00404-201ENST00000418660 SNHG12Q9BXW3 62 aa8.94□□□□□ -0.98
LINC00404-201ENST00000418660 SNCGO76070 127 aa8.93□□□□□ -0.98
LINC00404-201ENST00000418660 CEND1Q8N111 149 aa8.93□□□□□ -0.98
LINC00404-201ENST00000418660 TRBV7-7A0A0K0K1E9 115 aa8.92□□□□□ -0.98
LINC00404-201ENST00000418660 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
LINC00404-201ENST00000418660 TMEM238LA0A1B0GVL6 79 aa8.9□□□□□ -0.98
LINC00404-201ENST00000418660 A6NJY4 79 aa8.9□□□□□ -0.98
LINC00404-201ENST00000418660 PRO1854Q9UHT4 67 aa8.9□□□□□ -0.98
LINC00404-201ENST00000418660 FAM218AQ96MZ4 157 aa8.88□□□□□ -0.99
LINC00404-201ENST00000418660 H3BUT2 72 aa8.87□□□□□ -0.99
LINC00404-201ENST00000418660 FXYD2P54710 66 aa8.87□□□□□ -0.99
LINC00404-201ENST00000418660 PYY3Q5JQD4 70 aa8.87□□□□□ -0.99
LINC00404-201ENST00000418660 A0A1B0GX51 115 aa8.86□□□□□ -0.99
LINC00404-201ENST00000418660 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
LINC00404-201ENST00000418660 GHRHP01286 108 aa8.84□□□□□ -0.99
LINC00404-201ENST00000418660 NDUFV3P56181 108 aaKnown RBP8.84□□□□□ -0.99
LINC00404-201ENST00000418660 HSD52Q0P140 79 aa8.82□□□□□ -1
LINC00404-201ENST00000418660 Q6Q795 121 aa8.82□□□□□ -1
LINC00404-201ENST00000418660 KRTAP9-2Q9BYQ4 174 aa8.82□□□□□ -1
LINC00404-201ENST00000418660 TRIAP1O43715 76 aa8.81□□□□□ -1
LINC00404-201ENST00000418660 LST1O00453 97 aa8.8□□□□□ -1
LINC00404-201ENST00000418660 LCE2CQ5TA81 110 aa8.8□□□□□ -1
LINC00404-201ENST00000418660 TEN1Q86WV5 123 aa8.8□□□□□ -1
LINC00404-201ENST00000418660 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
LINC00404-201ENST00000418660 H3BMG7 143 aa8.78□□□□□ -1
LINC00404-201ENST00000418660 FABP2P12104 132 aa8.78□□□□□ -1
LINC00404-201ENST00000418660 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
LINC00404-201ENST00000418660 TMA7Q9Y2S6 64 aaKnown RBP8.78□□□□□ -1
LINC00404-201ENST00000418660 UQCR10Q9UDW1 63 aa8.76□□□□□ -1.01
LINC00404-201ENST00000418660 K7ERJ3 54 aa8.75□□□□□ -1.01
LINC00404-201ENST00000418660 PSMB2P49721 201 aa8.75□□□□□ -1.01
LINC00404-201ENST00000418660 OBSCN-AS1Q96MR7 158 aa8.74□□□□□ -1.01
LINC00404-201ENST00000418660 A0A087WSZ3 146 aa8.73□□□□□ -1.01
LINC00404-201ENST00000418660 H3BQ85 93 aa8.73□□□□□ -1.01
LINC00404-201ENST00000418660 DNAL4O96015 105 aa8.73□□□□□ -1.01
LINC00404-201ENST00000418660 COX6CP09669 75 aa8.73□□□□□ -1.01
LINC00404-201ENST00000418660 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
LINC00404-201ENST00000418660 Q75L30 129 aa8.7□□□□□ -1.02
LINC00404-201ENST00000418660 A0A1W2PNM2 257 aa8.69□□□□□ -1.02
LINC00404-201ENST00000418660 MT1HP80294 61 aa8.69□□□□□ -1.02
LINC00404-201ENST00000418660 TMEM256-PLSCR3K7ERE1 68 aa8.68□□□□□ -1.02
LINC00404-201ENST00000418660 ATP11AUNQ6ZP68 121 aa8.68□□□□□ -1.02
LINC00404-201ENST00000418660 ANKRD29Q8N6D5 301 aa8.68□□□□□ -1.02
LINC00404-201ENST00000418660 Q96NJ1 140 aa8.68□□□□□ -1.02
LINC00404-201ENST00000418660 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
LINC00404-201ENST00000418660 LOC105371267A0A1B0GV96 52 aa8.64□□□□□ -1.03
LINC00404-201ENST00000418660 A0A1B0GV72 72 aa8.63□□□□□ -1.03
LINC00404-201ENST00000418660 TRACP01848 142 aa8.63□□□□□ -1.03
LINC00404-201ENST00000418660 UBE2V1Q13404 147 aa8.63□□□□□ -1.03
LINC00404-201ENST00000418660 SCGB1C2P0DMR2 95 aa8.62□□□□□ -1.03
LINC00404-201ENST00000418660 C20orf166-AS1Q96NR2 134 aa8.62□□□□□ -1.03
LINC00404-201ENST00000418660 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
LINC00404-201ENST00000418660 A8MUU9 505 aa8.6□□□□□ -1.03
LINC00404-201ENST00000418660 SIGMAR1Q99720 223 aa8.6□□□□□ -1.03
LINC00404-201ENST00000418660 CCKP06307 115 aa8.59□□□□□ -1.03
LINC00404-201ENST00000418660 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
LINC00404-201ENST00000418660 DSCR10P59022 87 aa8.58□□□□□ -1.04
LINC00404-201ENST00000418660 IGKV4-1P06312 121 aa8.57□□□□□ -1.04
LINC00404-201ENST00000418660 RBM3P98179 157 aaKnown RBP8.55□□□□□ -1.04
LINC00404-201ENST00000418660 LINC00472Q9H8W2 130 aa8.55□□□□□ -1.04
LINC00404-201ENST00000418660 LINC00313P59037 77 aa8.54□□□□□ -1.04
LINC00404-201ENST00000418660 M0R143 59 aa8.53□□□□□ -1.04
LINC00404-201ENST00000418660 M0R2T5 61 aa8.53□□□□□ -1.04
LINC00404-201ENST00000418660 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
LINC00404-201ENST00000418660 KRTAP9-6A0A140TA67 174 aa8.52□□□□□ -1.05
LINC00404-201ENST00000418660 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
LINC00404-201ENST00000418660 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
LINC00404-201ENST00000418660 DSCR8Q96T75 97 aa8.52□□□□□ -1.05
LINC00404-201ENST00000418660 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
LINC00404-201ENST00000418660 VPS25Q9BRG1 176 aa8.51□□□□□ -1.05
LINC00404-201ENST00000418660 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
LINC00404-201ENST00000418660 SMIM6P0DI80 62 aa8.48□□□□□ -1.05
LINC00404-201ENST00000418660 ATXN8Q156A1 80 aa8.48□□□□□ -1.05
LINC00404-201ENST00000418660 C9JAW5 83 aa8.47□□□□□ -1.05
LINC00404-201ENST00000418660 C21orf62-AS1Q17RA5 79 aa8.47□□□□□ -1.05
LINC00404-201ENST00000418660 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
LINC00404-201ENST00000418660 IGHV6-1A0A0B4J1U7 121 aa8.46□□□□□ -1.06
LINC00404-201ENST00000418660 NAA38Q9BRA0 125 aaKnown RBP8.46□□□□□ -1.06
LINC00404-201ENST00000418660 TRBV20-1A0A075B6N2 111 aa8.44□□□□□ -1.06
LINC00404-201ENST00000418660 A0A1B0GVX0 72 aa8.42□□□□□ -1.06
LINC00404-201ENST00000418660 C8orf87E5RJ46 101 aa8.42□□□□□ -1.06
LINC00404-201ENST00000418660 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms