RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 XP32Q5T750 250 aa11.36□□□□□ -0.59
PKNOX1-202ENST00000418336 KRTAP4-1Q9BYQ7 146 aa11.35□□□□□ -0.59
PKNOX1-202ENST00000418336 IGLV8-61A0A075B6I0 122 aa11.34□□□□□ -0.59
PKNOX1-202ENST00000418336 A0A0U1RQV1 116 aa11.34□□□□□ -0.59
PKNOX1-202ENST00000418336 H7C2G1 150 aa11.34□□□□□ -0.59
PKNOX1-202ENST00000418336 BVES-AS1Q5T3Y7 98 aa11.33□□□□□ -0.6
PKNOX1-202ENST00000418336 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.32□□□□□ -0.6
PKNOX1-202ENST00000418336 CEND1Q8N111 149 aa11.32□□□□□ -0.6
PKNOX1-202ENST00000418336 LCE2AQ5TA79 106 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-202ENST00000418336 FAM218AQ96MZ4 157 aa11.31□□□□□ -0.6
PKNOX1-202ENST00000418336 FXYD2P54710 66 aa11.3□□□□□ -0.6
PKNOX1-202ENST00000418336 C1orf195Q5TG92 126 aa11.3□□□□□ -0.6
PKNOX1-202ENST00000418336 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
PKNOX1-202ENST00000418336 IGFL1Q6UW32 110 aa11.26□□□□□ -0.61
PKNOX1-202ENST00000418336 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
PKNOX1-202ENST00000418336 TMA7Q9Y2S6 64 aaKnown RBP11.26□□□□□ -0.61
PKNOX1-202ENST00000418336 OCIAD2Q56VL3 154 aa11.24□□□□□ -0.61
PKNOX1-202ENST00000418336 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
PKNOX1-202ENST00000418336 F8WEM9 126 aa11.22□□□□□ -0.61
PKNOX1-202ENST00000418336 H0YGX0 51 aa11.22□□□□□ -0.61
PKNOX1-202ENST00000418336 SEC61BP60468 96 aaKnown RBP11.22□□□□□ -0.61
PKNOX1-202ENST00000418336 Q6JHZ5 121 aa11.22□□□□□ -0.61
PKNOX1-202ENST00000418336 CLEC2BQ92478 149 aa11.22□□□□□ -0.61
PKNOX1-202ENST00000418336 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
PKNOX1-202ENST00000418336 HSD52Q0P140 79 aa11.19□□□□□ -0.62
PKNOX1-202ENST00000418336 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
PKNOX1-202ENST00000418336 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
PKNOX1-202ENST00000418336 A6NJY4 79 aa11.18□□□□□ -0.62
PKNOX1-202ENST00000418336 TRIAP1O43715 76 aa11.18□□□□□ -0.62
PKNOX1-202ENST00000418336 H3BUT2 72 aa11.17□□□□□ -0.62
PKNOX1-202ENST00000418336 A0A1B0GX51 115 aa11.15□□□□□ -0.62
PKNOX1-202ENST00000418336 K7ERJ3 54 aa11.15□□□□□ -0.62
PKNOX1-202ENST00000418336 SNHG12Q9BXW3 62 aa11.14□□□□□ -0.63
PKNOX1-202ENST00000418336 TCL1BO95988 128 aa11.13□□□□□ -0.63
PKNOX1-202ENST00000418336 UQCR10Q9UDW1 63 aa11.13□□□□□ -0.63
PKNOX1-202ENST00000418336 Q6Q795 121 aa11.11□□□□□ -0.63
PKNOX1-202ENST00000418336 NDUFV3P56181 108 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-202ENST00000418336 KRTAP19-2Q3LHN2 52 aa11.09□□□□□ -0.63
PKNOX1-202ENST00000418336 PCOTHQ58A44 107 aa11.08□□□□□ -0.64
PKNOX1-202ENST00000418336 LCE2CQ5TA81 110 aa11.06□□□□□ -0.64
PKNOX1-202ENST00000418336 KRTAP9-2Q9BYQ4 174 aa11.04□□□□□ -0.64
PKNOX1-202ENST00000418336 SNCGO76070 127 aa11.03□□□□□ -0.64
PKNOX1-202ENST00000418336 RPL37P61927 97 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-202ENST00000418336 H3BMG7 143 aa11.01□□□□□ -0.65
PKNOX1-202ENST00000418336 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
PKNOX1-202ENST00000418336 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
PKNOX1-202ENST00000418336 FABP2P12104 132 aa10.99□□□□□ -0.65
PKNOX1-202ENST00000418336 Q96NJ1 140 aa10.99□□□□□ -0.65
PKNOX1-202ENST00000418336 PSMB2P49721 201 aa10.98□□□□□ -0.65
PKNOX1-202ENST00000418336 A0A087WSZ3 146 aa10.95□□□□□ -0.66
PKNOX1-202ENST00000418336 LST1O00453 97 aa10.95□□□□□ -0.66
PKNOX1-202ENST00000418336 GHRHP01286 108 aa10.95□□□□□ -0.66
PKNOX1-202ENST00000418336 ORMDL1Q9P0S3 153 aa10.95□□□□□ -0.66
PKNOX1-202ENST00000418336 COX6CP09669 75 aa10.92□□□□□ -0.66
PKNOX1-202ENST00000418336 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
PKNOX1-202ENST00000418336 DNAL4O96015 105 aa10.91□□□□□ -0.66
PKNOX1-202ENST00000418336 TRACP01848 142 aa10.91□□□□□ -0.66
PKNOX1-202ENST00000418336 H3BQ85 93 aa10.9□□□□□ -0.66
PKNOX1-202ENST00000418336 TMEM256-PLSCR3K7ERE1 68 aa10.9□□□□□ -0.66
PKNOX1-202ENST00000418336 OBSCN-AS1Q96MR7 158 aa10.9□□□□□ -0.66
PKNOX1-202ENST00000418336 SMIM6P0DI80 62 aa10.89□□□□□ -0.67
PKNOX1-202ENST00000418336 FLGP20930 4061 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-202ENST00000418336 UBE2V1Q13404 147 aa10.88□□□□□ -0.67
PKNOX1-202ENST00000418336 TRBV7-4A0A0J9YYF1 115 aa10.87□□□□□ -0.67
PKNOX1-202ENST00000418336 Q75L30 129 aa10.87□□□□□ -0.67
PKNOX1-202ENST00000418336 A0A1B0GV72 72 aa10.86□□□□□ -0.67
PKNOX1-202ENST00000418336 ANKRD29Q8N6D5 301 aa10.85□□□□□ -0.67
PKNOX1-202ENST00000418336 MT1HP80294 61 aa10.84□□□□□ -0.67
PKNOX1-202ENST00000418336 SCGB1C2P0DMR2 95 aa10.81□□□□□ -0.68
PKNOX1-202ENST00000418336 C20orf166-AS1Q96NR2 134 aa10.81□□□□□ -0.68
PKNOX1-202ENST00000418336 LOC105371267A0A1B0GV96 52 aa10.8□□□□□ -0.68
PKNOX1-202ENST00000418336 M0R143 59 aa10.79□□□□□ -0.68
PKNOX1-202ENST00000418336 NAA38Q9BRA0 125 aaKnown RBP10.79□□□□□ -0.68
PKNOX1-202ENST00000418336 LINC00472Q9H8W2 130 aa10.79□□□□□ -0.68
PKNOX1-202ENST00000418336 A8MUU9 505 aa10.78□□□□□ -0.68
PKNOX1-202ENST00000418336 CCKP06307 115 aa10.77□□□□□ -0.69
PKNOX1-202ENST00000418336 KRTAP9-6A0A140TA67 174 aa10.75□□□□□ -0.69
PKNOX1-202ENST00000418336 KRTAP16-1A8MUX0 517 aa10.75□□□□□ -0.69
PKNOX1-202ENST00000418336 BAALC-AS2P0C853 105 aa10.74□□□□□ -0.69
PKNOX1-202ENST00000418336 DSCR10P59022 87 aa10.74□□□□□ -0.69
PKNOX1-202ENST00000418336 RBM3P98179 157 aaKnown RBP10.73□□□□□ -0.69
PKNOX1-202ENST00000418336 NOTCH2NLQ7Z3S9 236 aa10.72□□□□□ -0.69
PKNOX1-202ENST00000418336 IGKV4-1P06312 121 aa10.71□□□□□ -0.69
PKNOX1-202ENST00000418336 DEFB116Q30KQ4 102 aa10.7□□□□□ -0.7
PKNOX1-202ENST00000418336 ATP11AUNQ6ZP68 121 aa10.7□□□□□ -0.7
PKNOX1-202ENST00000418336 SIGMAR1Q99720 223 aa10.7□□□□□ -0.7
PKNOX1-202ENST00000418336 ATXN8Q156A1 80 aa10.69□□□□□ -0.7
PKNOX1-202ENST00000418336 TSTD3H0UI37 97 aa10.66□□□□□ -0.7
PKNOX1-202ENST00000418336 DSCR8Q96T75 97 aa10.66□□□□□ -0.7
PKNOX1-202ENST00000418336 LINC00313P59037 77 aa10.65□□□□□ -0.7
PKNOX1-202ENST00000418336 LORP23490 312 aaPredicted RBP10.63□□□□□ -0.71
PKNOX1-202ENST00000418336 Q6ZQT0 140 aa10.63□□□□□ -0.71
PKNOX1-202ENST00000418336 VPS25Q9BRG1 176 aa10.63□□□□□ -0.71
PKNOX1-202ENST00000418336 C9JAW5 83 aa10.62□□□□□ -0.71
PKNOX1-202ENST00000418336 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
PKNOX1-202ENST00000418336 LOC110117498A0A087WWA1 95 aa10.61□□□□□ -0.71
PKNOX1-202ENST00000418336 KRTAP10-6P60371 365 aaPredicted RBP10.6□□□□□ -0.71
PKNOX1-202ENST00000418336 JMJD7-PLA2G4BH0Y9G9 81 aa10.58□□□□□ -0.72
PKNOX1-202ENST00000418336 TAX1BP3O14907 124 aa10.58□□□□□ -0.72
PKNOX1-202ENST00000418336 BATFQ16520 125 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms