RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 Q5XG85 94 aa14.41□□□□□ -0.1
VEGFA-207ENST00000413642 C2orf91Q6ZV80 131 aa14.41□□□□□ -0.1
VEGFA-207ENST00000413642 C1orf195Q5TG92 126 aa14.4□□□□□ -0.1
VEGFA-207ENST00000413642 VAMP8Q9BV40 100 aa14.4□□□□□ -0.1
VEGFA-207ENST00000413642 HIGD1BQ9P298 99 aa14.39□□□□□ -0.11
VEGFA-207ENST00000413642 F8WEM9 126 aa14.38□□□□□ -0.11
VEGFA-207ENST00000413642 BVES-AS1Q5T3Y7 98 aa14.36□□□□□ -0.11
VEGFA-207ENST00000413642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-207ENST00000413642 RAB37Q96AX2 223 aa14.35□□□□□ -0.11
VEGFA-207ENST00000413642 OCIAD2Q56VL3 154 aa14.31□□□□□ -0.12
VEGFA-207ENST00000413642 IGFL1Q6UW32 110 aa14.31□□□□□ -0.12
VEGFA-207ENST00000413642 IGLV8-61A0A075B6I0 122 aa14.3□□□□□ -0.12
VEGFA-207ENST00000413642 A0A0B4J2C4 111 aa14.3□□□□□ -0.12
VEGFA-207ENST00000413642 Q6JHZ5 121 aa14.28□□□□□ -0.12
VEGFA-207ENST00000413642 PCOTHQ58A44 107 aa14.27□□□□□ -0.13
VEGFA-207ENST00000413642 CEND1Q8N111 149 aa14.27□□□□□ -0.13
VEGFA-207ENST00000413642 FAM218AQ96MZ4 157 aa14.27□□□□□ -0.13
VEGFA-207ENST00000413642 TCL1BO95988 128 aa14.26□□□□□ -0.13
VEGFA-207ENST00000413642 CLEC2BQ92478 149 aa14.26□□□□□ -0.13
VEGFA-207ENST00000413642 SNHG12Q9BXW3 62 aa14.26□□□□□ -0.13
VEGFA-207ENST00000413642 H3BUT2 72 aa14.24□□□□□ -0.13
VEGFA-207ENST00000413642 PYY3Q5JQD4 70 aa14.24□□□□□ -0.13
VEGFA-207ENST00000413642 TRBV7-7A0A0K0K1E9 115 aa14.23□□□□□ -0.13
VEGFA-207ENST00000413642 FXYD2P54710 66 aa14.23□□□□□ -0.13
VEGFA-207ENST00000413642 PPDPFLQ8WWR9 84 aa14.23□□□□□ -0.13
VEGFA-207ENST00000413642 H0YGX0 51 aa14.21□□□□□ -0.13
VEGFA-207ENST00000413642 PRO1854Q9UHT4 67 aa14.2□□□□□ -0.14
VEGFA-207ENST00000413642 TMA7Q9Y2S6 64 aaKnown RBP14.17□□□□□ -0.14
VEGFA-207ENST00000413642 TMEM238LA0A1B0GVL6 79 aa14.15□□□□□ -0.14
VEGFA-207ENST00000413642 A6NJY4 79 aa14.15□□□□□ -0.14
VEGFA-207ENST00000413642 SNCGO76070 127 aa14.12□□□□□ -0.15
VEGFA-207ENST00000413642 TRIAP1O43715 76 aa14.11□□□□□ -0.15
VEGFA-207ENST00000413642 NDUFV3P56181 108 aaKnown RBP14.11□□□□□ -0.15
VEGFA-207ENST00000413642 K7ERJ3 54 aa14.09□□□□□ -0.15
VEGFA-207ENST00000413642 RPL37P61927 97 aaKnown RBP14.09□□□□□ -0.15
VEGFA-207ENST00000413642 HSD52Q0P140 79 aa14.09□□□□□ -0.15
VEGFA-207ENST00000413642 LCE2CQ5TA81 110 aa14.09□□□□□ -0.15
VEGFA-207ENST00000413642 KRTAP9-2Q9BYQ4 174 aa14.08□□□□□ -0.16
VEGFA-207ENST00000413642 KRTAP19-2Q3LHN2 52 aa14.06□□□□□ -0.16
VEGFA-207ENST00000413642 A0A1B0GX51 115 aa14.05□□□□□ -0.16
VEGFA-207ENST00000413642 FABP2P12104 132 aa14.05□□□□□ -0.16
VEGFA-207ENST00000413642 H3BMG7 143 aa14.02□□□□□ -0.17
VEGFA-207ENST00000413642 LST1O00453 97 aa14.02□□□□□ -0.17
VEGFA-207ENST00000413642 Q6Q795 121 aa14.01□□□□□ -0.17
VEGFA-207ENST00000413642 PSMB2P49721 201 aa13.99□□□□□ -0.17
VEGFA-207ENST00000413642 TEN1Q86WV5 123 aa13.99□□□□□ -0.17
VEGFA-207ENST00000413642 UQCR10Q9UDW1 63 aa13.99□□□□□ -0.17
VEGFA-207ENST00000413642 OBSCN-AS1Q96MR7 158 aa13.98□□□□□ -0.17
VEGFA-207ENST00000413642 A0A087WSZ3 146 aa13.95□□□□□ -0.18
VEGFA-207ENST00000413642 GHRHP01286 108 aa13.94□□□□□ -0.18
VEGFA-207ENST00000413642 SS18L2Q9UHA2 77 aa13.94□□□□□ -0.18
VEGFA-207ENST00000413642 A0A1B0GV72 72 aa13.93□□□□□ -0.18
VEGFA-207ENST00000413642 A0A1W2PNM2 257 aa13.92□□□□□ -0.18
VEGFA-207ENST00000413642 DNAL4O96015 105 aa13.9□□□□□ -0.18
VEGFA-207ENST00000413642 ORMDL1Q9P0S3 153 aa13.9□□□□□ -0.18
VEGFA-207ENST00000413642 MT1HP80294 61 aa13.88□□□□□ -0.19
VEGFA-207ENST00000413642 Q96NJ1 140 aa13.88□□□□□ -0.19
VEGFA-207ENST00000413642 COX6CP09669 75 aa13.87□□□□□ -0.19
VEGFA-207ENST00000413642 Q75L30 129 aa13.84□□□□□ -0.19
VEGFA-207ENST00000413642 ANKRD29Q8N6D5 301 aa13.84□□□□□ -0.19
VEGFA-207ENST00000413642 TMEM256-PLSCR3K7ERE1 68 aa13.8□□□□□ -0.2
VEGFA-207ENST00000413642 ATP11AUNQ6ZP68 121 aa13.79□□□□□ -0.2
VEGFA-207ENST00000413642 H3BQ85 93 aa13.78□□□□□ -0.2
VEGFA-207ENST00000413642 SCGB1C2P0DMR2 95 aa13.77□□□□□ -0.21
VEGFA-207ENST00000413642 TRBV7-4A0A0J9YYF1 115 aa13.75□□□□□ -0.21
VEGFA-207ENST00000413642 TRACP01848 142 aa13.75□□□□□ -0.21
VEGFA-207ENST00000413642 DSCR10P59022 87 aa13.75□□□□□ -0.21
VEGFA-207ENST00000413642 SIGMAR1Q99720 223 aa13.74□□□□□ -0.21
VEGFA-207ENST00000413642 UBE2V1Q13404 147 aa13.73□□□□□ -0.21
VEGFA-207ENST00000413642 COX6B2Q6YFQ2 88 aa13.72□□□□□ -0.21
VEGFA-207ENST00000413642 C20orf166-AS1Q96NR2 134 aa13.72□□□□□ -0.21
VEGFA-207ENST00000413642 CCKP06307 115 aa13.71□□□□□ -0.21
VEGFA-207ENST00000413642 A8MUU9 505 aa13.7□□□□□ -0.22
VEGFA-207ENST00000413642 IGKV4-1P06312 121 aa13.69□□□□□ -0.22
VEGFA-207ENST00000413642 DEFB116Q30KQ4 102 aa13.69□□□□□ -0.22
VEGFA-207ENST00000413642 NAA38Q9BRA0 125 aaKnown RBP13.66□□□□□ -0.22
VEGFA-207ENST00000413642 LINC00472Q9H8W2 130 aa13.65□□□□□ -0.22
VEGFA-207ENST00000413642 LCE2DQ5TA82 110 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-207ENST00000413642 BAALC-AS2P0C853 105 aa13.63□□□□□ -0.23
VEGFA-207ENST00000413642 VPS25Q9BRG1 176 aa13.63□□□□□ -0.23
VEGFA-207ENST00000413642 RBM3P98179 157 aaKnown RBP13.62□□□□□ -0.23
VEGFA-207ENST00000413642 NOTCH2NLQ7Z3S9 236 aa13.62□□□□□ -0.23
VEGFA-207ENST00000413642 M0R143 59 aa13.6□□□□□ -0.23
VEGFA-207ENST00000413642 LINC00313P59037 77 aa13.6□□□□□ -0.23
VEGFA-207ENST00000413642 KRTAP10-6P60371 365 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-207ENST00000413642 KRTAP16-1A8MUX0 517 aa13.59□□□□□ -0.23
VEGFA-207ENST00000413642 M0R2T5 61 aa13.59□□□□□ -0.23
VEGFA-207ENST00000413642 LORP23490 312 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-207ENST00000413642 KRTAP9-6A0A140TA67 174 aa13.58□□□□□ -0.24
VEGFA-207ENST00000413642 SMIM6P0DI80 62 aa13.56□□□□□ -0.24
VEGFA-207ENST00000413642 DSCR8Q96T75 97 aa13.56□□□□□ -0.24
VEGFA-207ENST00000413642 IGHV6-1A0A0B4J1U7 121 aa13.53□□□□□ -0.24
VEGFA-207ENST00000413642 ATXN8Q156A1 80 aa13.51□□□□□ -0.25
VEGFA-207ENST00000413642 C9JAW5 83 aa13.5□□□□□ -0.25
VEGFA-207ENST00000413642 FLGP20930 4061 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-207ENST00000413642 A0A1B0GVX0 72 aa13.43□□□□□ -0.26
VEGFA-207ENST00000413642 BATFQ16520 125 aa13.42□□□□□ -0.26
VEGFA-207ENST00000413642 Q6ZQT0 140 aa13.42□□□□□ -0.26
VEGFA-207ENST00000413642 TRBV20-1A0A075B6N2 111 aa13.38□□□□□ -0.27
VEGFA-207ENST00000413642 TSTD3H0UI37 97 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms