RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 FRYQ5TBA9 3013 aa5.47□□□□□ -1.53
PBRM1-209ENST00000412587 LAMA1P25391 3075 aa5.47□□□□□ -1.53
PBRM1-209ENST00000412587 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
PBRM1-209ENST00000412587 A8MU10 97 aa5.46□□□□□ -1.54
PBRM1-209ENST00000412587 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
PBRM1-209ENST00000412587 NOTCH1P46531 2555 aa5.46□□□□□ -1.54
PBRM1-209ENST00000412587 A0A087WTM6 91 aa5.45□□□□□ -1.54
PBRM1-209ENST00000412587 IGLV1-50A0A075B6I6 118 aa5.45□□□□□ -1.54
PBRM1-209ENST00000412587 CR1P17927 2039 aa5.45□□□□□ -1.54
PBRM1-209ENST00000412587 C8orf17Q9NRJ1 99 aa5.45□□□□□ -1.54
PBRM1-209ENST00000412587 APLNQ9ULZ1 77 aa5.44□□□□□ -1.54
PBRM1-209ENST00000412587 DNAH14Q0VDD8 3507 aa5.44□□□□□ -1.54
PBRM1-209ENST00000412587 GCN1Q92616 2671 aaKnown RBP5.43□□□□□ -1.54
PBRM1-209ENST00000412587 SZT2Q5T011 3432 aa5.43□□□□□ -1.54
PBRM1-209ENST00000412587 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
PBRM1-209ENST00000412587 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
PBRM1-209ENST00000412587 LCE6AA0A183 80 aa5.42□□□□□ -1.54
PBRM1-209ENST00000412587 HRES1P13985 223 aa5.42□□□□□ -1.54
PBRM1-209ENST00000412587 TLX1NBP0CAT3 122 aa5.41□□□□□ -1.54
PBRM1-209ENST00000412587 CASC10Q5T4H9 136 aa5.4□□□□□ -1.54
PBRM1-209ENST00000412587 UBR5O95071 2799 aaPredicted RBP5.4□□□□□ -1.54
PBRM1-209ENST00000412587 EYSQ5T1H1 3165 aa5.4□□□□□ -1.55
PBRM1-209ENST00000412587 DMAC1Q96GE9 116 aa5.39□□□□□ -1.55
PBRM1-209ENST00000412587 A0A1B0GVX0 72 aa5.38□□□□□ -1.55
PBRM1-209ENST00000412587 ZNF861PO60384 105 aa5.38□□□□□ -1.55
PBRM1-209ENST00000412587 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
PBRM1-209ENST00000412587 NBEAL1Q6ZS30 2694 aa5.38□□□□□ -1.55
PBRM1-209ENST00000412587 A0A087X002 238 aa5.38□□□□□ -1.55
PBRM1-209ENST00000412587 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
PBRM1-209ENST00000412587 CNBPP62633 177 aaKnown RBP5.37□□□□□ -1.55
PBRM1-209ENST00000412587 FLNCQ14315 2725 aa5.37□□□□□ -1.55
PBRM1-209ENST00000412587 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
PBRM1-209ENST00000412587 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
PBRM1-209ENST00000412587 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
PBRM1-209ENST00000412587 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
PBRM1-209ENST00000412587 SMR3BP02814 79 aaPredicted RBP5.35□□□□□ -1.55
PBRM1-209ENST00000412587 FRYLO94915 3013 aa5.35□□□□□ -1.55
PBRM1-209ENST00000412587 Q8NDZ9 215 aa5.35□□□□□ -1.55
PBRM1-209ENST00000412587 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
PBRM1-209ENST00000412587 J3QL48 77 aa5.34□□□□□ -1.55
PBRM1-209ENST00000412587 SPEGQ15772 3267 aa5.34□□□□□ -1.56
PBRM1-209ENST00000412587 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
PBRM1-209ENST00000412587 BOD1L1Q8NFC6 3051 aa5.33□□□□□ -1.56
PBRM1-209ENST00000412587 KALRNO60229 2985 aa5.33□□□□□ -1.56
PBRM1-209ENST00000412587 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
PBRM1-209ENST00000412587 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
PBRM1-209ENST00000412587 Q96NJ1 140 aa5.32□□□□□ -1.56
PBRM1-209ENST00000412587 COL6A3P12111 3177 aa5.32□□□□□ -1.56
PBRM1-209ENST00000412587 ADGRG4Q8IZF6 3080 aa5.32□□□□□ -1.56
PBRM1-209ENST00000412587 TNP2Q05952 138 aa5.31□□□□□ -1.56
PBRM1-209ENST00000412587 LINC00304Q8N9R0 145 aa5.31□□□□□ -1.56
PBRM1-209ENST00000412587 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
PBRM1-209ENST00000412587 ANAPC11Q9NYG5 84 aa5.31□□□□□ -1.56
PBRM1-209ENST00000412587 NBEAL2Q6ZNJ1 2754 aa5.29□□□□□ -1.56
PBRM1-209ENST00000412587 NSD1Q96L73 2696 aaPredicted RBP5.29□□□□□ -1.56
PBRM1-209ENST00000412587 IGLV5-37A0A075B6J1 123 aa5.28□□□□□ -1.56
PBRM1-209ENST00000412587 DMXL2Q8TDJ6 3036 aa5.28□□□□□ -1.56
PBRM1-209ENST00000412587 ROMO1P60602 79 aa5.28□□□□□ -1.56
PBRM1-209ENST00000412587 ITPR1Q14643 2758 aa5.28□□□□□ -1.56
PBRM1-209ENST00000412587 CFAP47Q6ZTR5 3102 aa5.27□□□□□ -1.57
PBRM1-209ENST00000412587 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
PBRM1-209ENST00000412587 ATMQ13315 3056 aa5.27□□□□□ -1.57
PBRM1-209ENST00000412587 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
PBRM1-209ENST00000412587 ITPR2Q14571 2701 aa5.26□□□□□ -1.57
PBRM1-209ENST00000412587 TACC2O95359 2948 aa5.26□□□□□ -1.57
PBRM1-209ENST00000412587 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
PBRM1-209ENST00000412587 COL12A1Q99715 3063 aa5.24□□□□□ -1.57
PBRM1-209ENST00000412587 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.24□□□□□ -1.57
PBRM1-209ENST00000412587 A0A1B0GU33 70 aa5.23□□□□□ -1.57
PBRM1-209ENST00000412587 Q6ZR54 194 aa5.23□□□□□ -1.57
PBRM1-209ENST00000412587 LINC00472Q9H8W2 130 aa5.23□□□□□ -1.57
PBRM1-209ENST00000412587 REV3LO60673 3130 aa5.22□□□□□ -1.57
PBRM1-209ENST00000412587 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
PBRM1-209ENST00000412587 SPRR1AP35321 89 aa5.21□□□□□ -1.58
PBRM1-209ENST00000412587 ASH1LQ9NR48 2969 aaKnown RBP5.2□□□□□ -1.58
PBRM1-209ENST00000412587 ZZEF1O43149 2961 aa5.2□□□□□ -1.58
PBRM1-209ENST00000412587 HIVEP1P15822 2718 aa5.19□□□□□ -1.58
PBRM1-209ENST00000412587 MYO15AQ9UKN7 3530 aa5.18□□□□□ -1.58
PBRM1-209ENST00000412587 STAB2Q8WWQ8 2551 aa5.18□□□□□ -1.58
PBRM1-209ENST00000412587 TNRC18O15417 2968 aaPredicted RBP5.18□□□□□ -1.58
PBRM1-209ENST00000412587 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
PBRM1-209ENST00000412587 LRBAP50851 2863 aa5.17□□□□□ -1.58
PBRM1-209ENST00000412587 COX6B2Q6YFQ2 88 aa5.16□□□□□ -1.58
PBRM1-209ENST00000412587 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
PBRM1-209ENST00000412587 PLAC8Q9NZF1 115 aa5.16□□□□□ -1.58
PBRM1-209ENST00000412587 UTP20O75691 2785 aaKnown RBP5.15□□□□□ -1.59
PBRM1-209ENST00000412587 KRTAP26-1Q6PEX3 210 aa5.13□□□□□ -1.59
PBRM1-209ENST00000412587 Q8N1X5 172 aa5.12□□□□□ -1.59
PBRM1-209ENST00000412587 SPTBN5Q9NRC6 3674 aaKnown RBP5.11□□□□□ -1.59
PBRM1-209ENST00000412587 SPRR1BP22528 89 aa5.11□□□□□ -1.59
PBRM1-209ENST00000412587 APCP25054 2843 aa5.11□□□□□ -1.59
PBRM1-209ENST00000412587 Q5W150 140 aa5.11□□□□□ -1.59
PBRM1-209ENST00000412587 TENM4Q6N022 2769 aa5.1□□□□□ -1.59
PBRM1-209ENST00000412587 KMT2BQ9UMN6 2715 aaPredicted RBP5.09□□□□□ -1.59
PBRM1-209ENST00000412587 A0A0D9SG42 100 aa5.09□□□□□ -1.59
PBRM1-209ENST00000412587 LOC400499M0QZD8 3231 aa5.09□□□□□ -1.59
PBRM1-209ENST00000412587 NIPBLQ6KC79 2804 aaeCLIP5.08□□□□□ -1.6
PBRM1-209ENST00000412587 MUC3AQ02505 3323 aa5.07□□□□□ -1.6
PBRM1-209ENST00000412587 A8MUU9 505 aa5.07□□□□□ -1.6
PBRM1-209ENST00000412587 KRTAP4-16G5E9R7 235 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms