RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 REG3GQ6UW15 175 aa12.54□□□□□ -0.4
LIMS2-207ENST00000409808 Q6ZRN7 208 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-207ENST00000409808 UBE2BP63146 152 aa12.54□□□□□ -0.4
LIMS2-207ENST00000409808 A0A0U1RQV1 116 aa12.53□□□□□ -0.4
LIMS2-207ENST00000409808 WWC2-AS2Q96NR7 200 aa12.53□□□□□ -0.4
LIMS2-207ENST00000409808 DNAH2Q9P225 4427 aa12.53□□□□□ -0.4
LIMS2-207ENST00000409808 LRCOL1A6NCL2 159 aa12.51□□□□□ -0.41
LIMS2-207ENST00000409808 SMIM26A0A096LP01 95 aa12.5□□□□□ -0.41
LIMS2-207ENST00000409808 LY6G6CO95867 125 aa12.49□□□□□ -0.41
LIMS2-207ENST00000409808 SMIM29Q86T20 159 aa12.47□□□□□ -0.41
LIMS2-207ENST00000409808 CNBPP62633 177 aaKnown RBP12.46□□□□□ -0.41
LIMS2-207ENST00000409808 Q6ZR54 194 aa12.46□□□□□ -0.41
LIMS2-207ENST00000409808 LCE6AA0A183 80 aa12.45□□□□□ -0.42
LIMS2-207ENST00000409808 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
LIMS2-207ENST00000409808 C14orf177Q52M58 125 aa12.44□□□□□ -0.42
LIMS2-207ENST00000409808 DSCR10P59022 87 aa12.44□□□□□ -0.42
LIMS2-207ENST00000409808 LINC00476Q8WZB0 136 aa12.43□□□□□ -0.42
LIMS2-207ENST00000409808 A0A096LNI7 61 aa12.42□□□□□ -0.42
LIMS2-207ENST00000409808 IGKV2-24A0A0C4DH68 120 aa12.42□□□□□ -0.42
LIMS2-207ENST00000409808 IGLV8-61A0A075B6I0 122 aa12.41□□□□□ -0.42
LIMS2-207ENST00000409808 HIGD2AQ9BW72 106 aa12.39□□□□□ -0.43
LIMS2-207ENST00000409808 FAM30AQ9NZY2 134 aa12.39□□□□□ -0.43
LIMS2-207ENST00000409808 A0A087WTM6 91 aa12.37□□□□□ -0.43
LIMS2-207ENST00000409808 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
LIMS2-207ENST00000409808 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
LIMS2-207ENST00000409808 ALMS1Q8TCU4 4167 aa12.37□□□□□ -0.43
LIMS2-207ENST00000409808 K7EQZ3 153 aa12.36□□□□□ -0.43
LIMS2-207ENST00000409808 FP248Q71RG6 208 aaPredicted RBP12.36□□□□□ -0.43
LIMS2-207ENST00000409808 C9orf163Q8N9P6 203 aa12.36□□□□□ -0.43
LIMS2-207ENST00000409808 DNAH6Q9C0G6 4158 aa12.35□□□□□ -0.43
LIMS2-207ENST00000409808 C1orf134Q5TEV5 83 aa12.35□□□□□ -0.43
LIMS2-207ENST00000409808 HECTD4Q9Y4D8 3996 aa12.34□□□□□ -0.43
LIMS2-207ENST00000409808 A0A1W2PNN7 141 aa12.34□□□□□ -0.43
LIMS2-207ENST00000409808 HCG22E2RYF7 251 aa12.34□□□□□ -0.43
LIMS2-207ENST00000409808 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.44
LIMS2-207ENST00000409808 H0Y9J4 135 aa12.32□□□□□ -0.44
LIMS2-207ENST00000409808 PRLHP81277 87 aa12.32□□□□□ -0.44
LIMS2-207ENST00000409808 HYDINQ4G0P3 5121 aa12.32□□□□□ -0.44
LIMS2-207ENST00000409808 PKIGQ9Y2B9 76 aa12.31□□□□□ -0.44
LIMS2-207ENST00000409808 LINC00336Q6ZUF6 198 aa12.3□□□□□ -0.44
LIMS2-207ENST00000409808 ZCCHC13Q8WW36 166 aaKnown RBP12.3□□□□□ -0.44
LIMS2-207ENST00000409808 PANO1I0J062 215 aa12.29□□□□□ -0.44
LIMS2-207ENST00000409808 SPRR1BP22528 89 aa12.29□□□□□ -0.44
LIMS2-207ENST00000409808 UBE2AP49459 152 aa12.28□□□□□ -0.44
LIMS2-207ENST00000409808 FRAS1Q86XX4 4008 aa12.27□□□□□ -0.45
LIMS2-207ENST00000409808 A0A087WSZ3 146 aa12.26□□□□□ -0.45
LIMS2-207ENST00000409808 LINC00474Q9P2X8 69 aa12.26□□□□□ -0.45
LIMS2-207ENST00000409808 RTL8CO15255 209 aa12.25□□□□□ -0.45
LIMS2-207ENST00000409808 PRO0628Q9UI54 55 aa12.25□□□□□ -0.45
LIMS2-207ENST00000409808 A0A0G2JQZ4 141 aa12.23□□□□□ -0.45
LIMS2-207ENST00000409808 PHF5AQ7RTV0 110 aaKnown RBP12.22□□□□□ -0.45
LIMS2-207ENST00000409808 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-207ENST00000409808 NDUFB1O75438 58 aa12.2□□□□□ -0.46
LIMS2-207ENST00000409808 KRTAP11-1Q8IUC1 163 aa12.2□□□□□ -0.46
LIMS2-207ENST00000409808 DNAH11Q96DT5 4516 aa12.19□□□□□ -0.46
LIMS2-207ENST00000409808 FAM229BQ4G0N7 80 aa12.19□□□□□ -0.46
LIMS2-207ENST00000409808 SACSQ9NZJ4 4579 aa12.18□□□□□ -0.46
LIMS2-207ENST00000409808 IGLV5-52A0A0A0MRZ9 124 aa12.17□□□□□ -0.46
LIMS2-207ENST00000409808 hDV103S1A0JD37 113 aa12.17□□□□□ -0.46
LIMS2-207ENST00000409808 MP68P56378 58 aa12.17□□□□□ -0.46
LIMS2-207ENST00000409808 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
LIMS2-207ENST00000409808 KRTAP29-1A8MX34 341 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-207ENST00000409808 SPACA4Q8TDM5 124 aa12.16□□□□□ -0.46
LIMS2-207ENST00000409808 CYP4F30PQ9H0H9 118 aa12.16□□□□□ -0.46
LIMS2-207ENST00000409808 FAT2Q9NYQ8 4349 aa12.16□□□□□ -0.46
LIMS2-207ENST00000409808 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
LIMS2-207ENST00000409808 PRR15Q8IV56 129 aa12.14□□□□□ -0.47
LIMS2-207ENST00000409808 H3BPC8 53 aa12.13□□□□□ -0.47
LIMS2-207ENST00000409808 KRTAP10-2P60368 255 aa12.13□□□□□ -0.47
LIMS2-207ENST00000409808 A8MWP4 228 aa12.12□□□□□ -0.47
LIMS2-207ENST00000409808 LINC00472Q9H8W2 130 aa12.12□□□□□ -0.47
LIMS2-207ENST00000409808 DNAH5Q8TE73 4624 aa12.12□□□□□ -0.47
LIMS2-207ENST00000409808 PKD1P98161 4303 aa12.11□□□□□ -0.47
LIMS2-207ENST00000409808 CASC2Q6XLA1 102 aa12.11□□□□□ -0.47
LIMS2-207ENST00000409808 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
LIMS2-207ENST00000409808 C1orf64Q8NEQ6 169 aa12.1□□□□□ -0.47
LIMS2-207ENST00000409808 MPLKIPQ8TAP9 179 aa12.1□□□□□ -0.47
LIMS2-207ENST00000409808 DNAH8Q96JB1 4490 aa12.1□□□□□ -0.47
LIMS2-207ENST00000409808 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.48
LIMS2-207ENST00000409808 SRRM2Q9UQ35 2752 aaKnown RBP12.07□□□□□ -0.48
LIMS2-207ENST00000409808 TRAV22A0A0B4J277 110 aa12.07□□□□□ -0.48
LIMS2-207ENST00000409808 Q1T7F1 81 aa12.04□□□□□ -0.48
LIMS2-207ENST00000409808 LINC00208Q96KT6 92 aa12.04□□□□□ -0.48
LIMS2-207ENST00000409808 H0Y9P7 68 aa12.02□□□□□ -0.49
LIMS2-207ENST00000409808 SPANXA2-OT1Q8N9U9 137 aa12.02□□□□□ -0.49
LIMS2-207ENST00000409808 BRK1Q8WUW1 75 aa12.01□□□□□ -0.49
LIMS2-207ENST00000409808 PLAC8Q9NZF1 115 aa12□□□□□ -0.49
LIMS2-207ENST00000409808 KRTAP10-1P60331 282 aa11.96□□□□□ -0.49
LIMS2-207ENST00000409808 LINC00483Q53H64 154 aa11.95□□□□□ -0.5
LIMS2-207ENST00000409808 MMP24-AS1A0A0U1RRL7 71 aa11.95□□□□□ -0.5
LIMS2-207ENST00000409808 ZNF706Q9Y5V0 76 aaPredicted RBP11.94□□□□□ -0.5
LIMS2-207ENST00000409808 V9GYY9 64 aa11.93□□□□□ -0.5
LIMS2-207ENST00000409808 PRR4Q16378 134 aa11.93□□□□□ -0.5
LIMS2-207ENST00000409808 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
LIMS2-207ENST00000409808 KMT2CQ8NEZ4 4911 aaKnown RBP11.92□□□□□ -0.5
LIMS2-207ENST00000409808 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
LIMS2-207ENST00000409808 TP53AIP1Q9HCN2 124 aa11.91□□□□□ -0.5
LIMS2-207ENST00000409808 PKHD1P08F94 4074 aa11.9□□□□□ -0.5
LIMS2-207ENST00000409808 ASB16-AS1Q495Z4 193 aa11.89□□□□□ -0.51
LIMS2-207ENST00000409808 MOBPQ13875 183 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms