RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 COX7CP15954 63 aa8.24□□□□□ -1.09
SMARCB1-203ENST00000407082 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
SMARCB1-203ENST00000407082 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
SMARCB1-203ENST00000407082 Q6ZVQ6 151 aa8.22□□□□□ -1.09
SMARCB1-203ENST00000407082 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
SMARCB1-203ENST00000407082 KRTAP4-16G5E9R7 235 aaPredicted RBP8.21□□□□□ -1.1
SMARCB1-203ENST00000407082 HAMPP81172 84 aa8.21□□□□□ -1.1
SMARCB1-203ENST00000407082 A0A087WTM6 91 aa8.2□□□□□ -1.1
SMARCB1-203ENST00000407082 LRCOL1A6NCL2 159 aa8.2□□□□□ -1.1
SMARCB1-203ENST00000407082 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
SMARCB1-203ENST00000407082 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
SMARCB1-203ENST00000407082 FAM19A5Q7Z5A7 132 aaPredicted RBP8.2□□□□□ -1.1
SMARCB1-203ENST00000407082 SERP2Q8N6R1 65 aa8.2□□□□□ -1.1
SMARCB1-203ENST00000407082 LINC00474Q9P2X8 69 aa8.2□□□□□ -1.1
SMARCB1-203ENST00000407082 IGLV5-48A0A075B6I7 105 aa8.19□□□□□ -1.1
SMARCB1-203ENST00000407082 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
SMARCB1-203ENST00000407082 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
SMARCB1-203ENST00000407082 MYCBP2O75592 4640 aa8.18□□□□□ -1.1
SMARCB1-203ENST00000407082 UBE2BP63146 152 aa8.18□□□□□ -1.1
SMARCB1-203ENST00000407082 Q8N377 158 aa8.18□□□□□ -1.1
SMARCB1-203ENST00000407082 DEFB105AQ8NG35 78 aa8.18□□□□□ -1.1
SMARCB1-203ENST00000407082 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
SMARCB1-203ENST00000407082 NREPQ16612 68 aa8.17□□□□□ -1.1
SMARCB1-203ENST00000407082 F8WEM9 126 aa8.16□□□□□ -1.1
SMARCB1-203ENST00000407082 CRYGAP11844 174 aa8.15□□□□□ -1.1
SMARCB1-203ENST00000407082 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
SMARCB1-203ENST00000407082 A0A087WVE0 104 aa8.14□□□□□ -1.11
SMARCB1-203ENST00000407082 A0A096LNI7 61 aa8.14□□□□□ -1.11
SMARCB1-203ENST00000407082 C9orf163Q8N9P6 203 aa8.14□□□□□ -1.11
SMARCB1-203ENST00000407082 Q9BRP9 147 aa8.14□□□□□ -1.11
SMARCB1-203ENST00000407082 FAT1Q14517 4588 aa8.13□□□□□ -1.11
SMARCB1-203ENST00000407082 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
SMARCB1-203ENST00000407082 H0Y9J4 135 aa8.12□□□□□ -1.11
SMARCB1-203ENST00000407082 FAM19A1Q7Z5A9 133 aa8.12□□□□□ -1.11
SMARCB1-203ENST00000407082 KRTAP7-1Q8IUC3 87 aa8.12□□□□□ -1.11
SMARCB1-203ENST00000407082 IGKV2-24A0A0C4DH68 120 aa8.11□□□□□ -1.11
SMARCB1-203ENST00000407082 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
SMARCB1-203ENST00000407082 TRAV7A0A075B6U4 112 aa8.1□□□□□ -1.11
SMARCB1-203ENST00000407082 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.11
SMARCB1-203ENST00000407082 BPY2O14599 106 aa8.09□□□□□ -1.11
SMARCB1-203ENST00000407082 SS18L2Q9UHA2 77 aa8.09□□□□□ -1.11
SMARCB1-203ENST00000407082 Q8NBF4 154 aa8.08□□□□□ -1.12
SMARCB1-203ENST00000407082 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
SMARCB1-203ENST00000407082 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
SMARCB1-203ENST00000407082 SPRR4Q96PI1 79 aa8.07□□□□□ -1.12
SMARCB1-203ENST00000407082 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-203ENST00000407082 ST20-AS1Q8NBB2 130 aa8.06□□□□□ -1.12
SMARCB1-203ENST00000407082 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
SMARCB1-203ENST00000407082 ERC2-IT1O76042 136 aa8.04□□□□□ -1.12
SMARCB1-203ENST00000407082 UBE2AP49459 152 aa8.04□□□□□ -1.12
SMARCB1-203ENST00000407082 TMEM258P61165 79 aa8.04□□□□□ -1.12
SMARCB1-203ENST00000407082 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
SMARCB1-203ENST00000407082 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-203ENST00000407082 A0A1W2PNM2 257 aa8.02□□□□□ -1.13
SMARCB1-203ENST00000407082 SPRR1BP22528 89 aa8.02□□□□□ -1.13
SMARCB1-203ENST00000407082 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
SMARCB1-203ENST00000407082 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-203ENST00000407082 PRLHP81277 87 aa8□□□□□ -1.13
SMARCB1-203ENST00000407082 SCXQ7RTU7 201 aa8□□□□□ -1.13
SMARCB1-203ENST00000407082 SMIM29Q86T20 159 aa8□□□□□ -1.13
SMARCB1-203ENST00000407082 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
SMARCB1-203ENST00000407082 NDUFC1O43677 76 aa7.99□□□□□ -1.13
SMARCB1-203ENST00000407082 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
SMARCB1-203ENST00000407082 CHTF8P0CG12 524 aa7.97□□□□□ -1.13
SMARCB1-203ENST00000407082 FAM30AQ9NZY2 134 aa7.97□□□□□ -1.13
SMARCB1-203ENST00000407082 RPS28P62857 69 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-203ENST00000407082 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
SMARCB1-203ENST00000407082 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.14
SMARCB1-203ENST00000407082 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-203ENST00000407082 RPL37AP61513 92 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-203ENST00000407082 C20orf197Q8N268 126 aa7.95□□□□□ -1.14
SMARCB1-203ENST00000407082 LCE2BO14633 110 aa7.94□□□□□ -1.14
SMARCB1-203ENST00000407082 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
SMARCB1-203ENST00000407082 J3KT08 172 aa7.93□□□□□ -1.14
SMARCB1-203ENST00000407082 Q6ZSA8 131 aa7.93□□□□□ -1.14
SMARCB1-203ENST00000407082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
SMARCB1-203ENST00000407082 DNAH8Q96JB1 4490 aa7.91□□□□□ -1.14
SMARCB1-203ENST00000407082 PANO1I0J062 215 aa7.91□□□□□ -1.14
SMARCB1-203ENST00000407082 OXTP01178 125 aa7.91□□□□□ -1.14
SMARCB1-203ENST00000407082 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.14
SMARCB1-203ENST00000407082 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
SMARCB1-203ENST00000407082 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
SMARCB1-203ENST00000407082 A0A087WSZ3 146 aa7.87□□□□□ -1.15
SMARCB1-203ENST00000407082 DSCR10P59022 87 aa7.87□□□□□ -1.15
SMARCB1-203ENST00000407082 Q8N9L7 120 aa7.87□□□□□ -1.15
SMARCB1-203ENST00000407082 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
SMARCB1-203ENST00000407082 OCR1Q9BZK8 76 aa7.87□□□□□ -1.15
SMARCB1-203ENST00000407082 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
SMARCB1-203ENST00000407082 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-203ENST00000407082 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
SMARCB1-203ENST00000407082 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
SMARCB1-203ENST00000407082 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
SMARCB1-203ENST00000407082 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
SMARCB1-203ENST00000407082 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
SMARCB1-203ENST00000407082 C5orf47Q569G3 176 aa7.83□□□□□ -1.16
SMARCB1-203ENST00000407082 RNF213Q63HN8 5207 aa7.82□□□□□ -1.16
SMARCB1-203ENST00000407082 H7BZZ5 65 aa7.82□□□□□ -1.16
SMARCB1-203ENST00000407082 K7EQZ3 153 aa7.82□□□□□ -1.16
SMARCB1-203ENST00000407082 NDUFB1O75438 58 aa7.82□□□□□ -1.16
SMARCB1-203ENST00000407082 CYSTM1Q9H1C7 97 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms