RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 LINC00474Q9P2X8 69 aa10.51□□□□□ -0.73
NUP50-203ENST00000407019 A0A0G2JQZ4 141 aa10.5□□□□□ -0.73
NUP50-203ENST00000407019 DSCR10P59022 87 aa10.49□□□□□ -0.73
NUP50-203ENST00000407019 TMEM254Q8TBM7 123 aa10.49□□□□□ -0.73
NUP50-203ENST00000407019 NDUFC1O43677 76 aa10.48□□□□□ -0.73
NUP50-203ENST00000407019 PLECQ15149 4684 aaKnown RBP10.47□□□□□ -0.73
NUP50-203ENST00000407019 SPRR1BP22528 89 aa10.46□□□□□ -0.73
NUP50-203ENST00000407019 OXTP01178 125 aa10.46□□□□□ -0.74
NUP50-203ENST00000407019 K7EQZ3 153 aa10.45□□□□□ -0.74
NUP50-203ENST00000407019 PANO1I0J062 215 aa10.44□□□□□ -0.74
NUP50-203ENST00000407019 A0A087WSZ3 146 aa10.43□□□□□ -0.74
NUP50-203ENST00000407019 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
NUP50-203ENST00000407019 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
NUP50-203ENST00000407019 DNAH7Q8WXX0 4024 aa10.41□□□□□ -0.74
NUP50-203ENST00000407019 CSMD3Q7Z407 3707 aa10.41□□□□□ -0.74
NUP50-203ENST00000407019 SPACA4Q8TDM5 124 aa10.4□□□□□ -0.75
NUP50-203ENST00000407019 SERP1Q9Y6X1 66 aa10.4□□□□□ -0.75
NUP50-203ENST00000407019 SVIPQ8NHG7 77 aa10.39□□□□□ -0.75
NUP50-203ENST00000407019 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
NUP50-203ENST00000407019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.38□□□□□ -0.75
NUP50-203ENST00000407019 A0A087WTM6 91 aa10.38□□□□□ -0.75
NUP50-203ENST00000407019 HCG22E2RYF7 251 aa10.38□□□□□ -0.75
NUP50-203ENST00000407019 DEFB116Q30KQ4 102 aa10.38□□□□□ -0.75
NUP50-203ENST00000407019 ATP5EP56381 51 aaPredicted RBP10.37□□□□□ -0.75
NUP50-203ENST00000407019 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
NUP50-203ENST00000407019 LCE6AA0A183 80 aa10.35□□□□□ -0.75
NUP50-203ENST00000407019 TENM2Q9NT68 2774 aa10.34□□□□□ -0.75
NUP50-203ENST00000407019 STARD9Q9P2P6 4700 aa10.33□□□□□ -0.76
NUP50-203ENST00000407019 RTL8CO15255 209 aa10.31□□□□□ -0.76
NUP50-203ENST00000407019 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
NUP50-203ENST00000407019 Q6ZR54 194 aa10.29□□□□□ -0.76
NUP50-203ENST00000407019 WFDC13Q8IUB5 93 aa10.29□□□□□ -0.76
NUP50-203ENST00000407019 Q5XG85 94 aa10.27□□□□□ -0.76
NUP50-203ENST00000407019 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.76
NUP50-203ENST00000407019 C5orf47Q569G3 176 aa10.27□□□□□ -0.77
NUP50-203ENST00000407019 A8MWP4 228 aa10.26□□□□□ -0.77
NUP50-203ENST00000407019 PRKDCP78527 4128 aaKnown RBP10.25□□□□□ -0.77
NUP50-203ENST00000407019 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
NUP50-203ENST00000407019 LINC00483Q53H64 154 aa10.24□□□□□ -0.77
NUP50-203ENST00000407019 IGLV9-49A0A0B4J1Y8 123 aa10.24□□□□□ -0.77
NUP50-203ENST00000407019 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
NUP50-203ENST00000407019 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
NUP50-203ENST00000407019 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
NUP50-203ENST00000407019 ZNF706Q9Y5V0 76 aaPredicted RBP10.23□□□□□ -0.77
NUP50-203ENST00000407019 IGLV5-52A0A0A0MRZ9 124 aa10.22□□□□□ -0.77
NUP50-203ENST00000407019 PSORS1C2Q9UIG4 136 aa10.22□□□□□ -0.77
NUP50-203ENST00000407019 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
NUP50-203ENST00000407019 C4orf26Q17RF5 130 aa10.21□□□□□ -0.77
NUP50-203ENST00000407019 CASC2Q6XLA1 102 aa10.21□□□□□ -0.77
NUP50-203ENST00000407019 SMIM26A0A096LP01 95 aa10.2□□□□□ -0.78
NUP50-203ENST00000407019 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
NUP50-203ENST00000407019 DNAH17Q9UFH2 4485 aa10.2□□□□□ -0.78
NUP50-203ENST00000407019 ZNF861PO60384 105 aa10.16□□□□□ -0.78
NUP50-203ENST00000407019 MP68P56378 58 aa10.16□□□□□ -0.78
NUP50-203ENST00000407019 WWC2-AS2Q96NR7 200 aa10.16□□□□□ -0.78
NUP50-203ENST00000407019 DNAH2Q9P225 4427 aa10.16□□□□□ -0.78
NUP50-203ENST00000407019 HRCT1Q6UXD1 115 aa10.14□□□□□ -0.79
NUP50-203ENST00000407019 NDUFB1O75438 58 aa10.14□□□□□ -0.79
NUP50-203ENST00000407019 FP248Q71RG6 208 aaPredicted RBP10.14□□□□□ -0.79
NUP50-203ENST00000407019 MOBPQ13875 183 aa10.13□□□□□ -0.79
NUP50-203ENST00000407019 Q96NJ1 140 aa10.13□□□□□ -0.79
NUP50-203ENST00000407019 MEGF8Q7Z7M0 2845 aa10.13□□□□□ -0.79
NUP50-203ENST00000407019 HECTD4Q9Y4D8 3996 aa10.12□□□□□ -0.79
NUP50-203ENST00000407019 MMP24-AS1A0A0U1RRL7 71 aa10.12□□□□□ -0.79
NUP50-203ENST00000407019 LY6G6CO95867 125 aa10.12□□□□□ -0.79
NUP50-203ENST00000407019 KMT2AQ03164 3969 aa10.1□□□□□ -0.79
NUP50-203ENST00000407019 H0Y9P7 68 aa10.1□□□□□ -0.79
NUP50-203ENST00000407019 FAM229BQ4G0N7 80 aa10.1□□□□□ -0.79
NUP50-203ENST00000407019 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
NUP50-203ENST00000407019 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
NUP50-203ENST00000407019 DNAH8Q96JB1 4490 aa10.09□□□□□ -0.79
NUP50-203ENST00000407019 TRAV22A0A0B4J277 110 aa10.08□□□□□ -0.8
NUP50-203ENST00000407019 H3BPC8 53 aa10.08□□□□□ -0.8
NUP50-203ENST00000407019 DNHD1Q96M86 4753 aa10.08□□□□□ -0.8
NUP50-203ENST00000407019 hDV103S1A0JD37 113 aa10.08□□□□□ -0.8
NUP50-203ENST00000407019 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
NUP50-203ENST00000407019 CYP4F30PQ9H0H9 118 aa10.05□□□□□ -0.8
NUP50-203ENST00000407019 C1orf64Q8NEQ6 169 aa10.03□□□□□ -0.8
NUP50-203ENST00000407019 C8orf17Q9NRJ1 99 aa10.03□□□□□ -0.8
NUP50-203ENST00000407019 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
NUP50-203ENST00000407019 FBN3Q75N90 2809 aa10.02□□□□□ -0.81
NUP50-203ENST00000407019 A0A1B0GVX0 72 aa10.01□□□□□ -0.81
NUP50-203ENST00000407019 CDK2AP2O75956 126 aa10.01□□□□□ -0.81
NUP50-203ENST00000407019 PRR4Q16378 134 aa10.01□□□□□ -0.81
NUP50-203ENST00000407019 DNAH6Q9C0G6 4158 aa10□□□□□ -0.81
NUP50-203ENST00000407019 IGHV6-1A0A0B4J1U7 121 aa9.99□□□□□ -0.81
NUP50-203ENST00000407019 FRAS1Q86XX4 4008 aa9.99□□□□□ -0.81
NUP50-203ENST00000407019 KRTAP10-2P60368 255 aa9.98□□□□□ -0.81
NUP50-203ENST00000407019 MPLKIPQ8TAP9 179 aa9.98□□□□□ -0.81
NUP50-203ENST00000407019 CIRBP-AS1Q8TBR5 109 aa9.98□□□□□ -0.81
NUP50-203ENST00000407019 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
NUP50-203ENST00000407019 SPANXA2-OT1Q8N9U9 137 aa9.97□□□□□ -0.81
NUP50-203ENST00000407019 TGP01266 2768 aa9.93□□□□□ -0.82
NUP50-203ENST00000407019 CD164Q04900 197 aa9.92□□□□□ -0.82
NUP50-203ENST00000407019 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
NUP50-203ENST00000407019 NDUFS5O43920 106 aa9.91□□□□□ -0.82
NUP50-203ENST00000407019 SSBP3-AS1Q7Z2R9 100 aa9.91□□□□□ -0.82
NUP50-203ENST00000407019 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
NUP50-203ENST00000407019 DNAH11Q96DT5 4516 aa9.91□□□□□ -0.82
NUP50-203ENST00000407019 LINC00336Q6ZUF6 198 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms