RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 PRR34Q9NV39 138 aa2.4□□□□□ -2.03
CLHC1-201ENST00000401408 IGKV1-17P01599 117 aa2.39□□□□□ -2.03
CLHC1-201ENST00000401408 FAM74A4Q5TZK3 123 aa2.39□□□□□ -2.03
CLHC1-201ENST00000401408 K7EMI3 77 aa2.38□□□□□ -2.03
CLHC1-201ENST00000401408 CNBPP62633 177 aaKnown RBP2.38□□□□□ -2.03
CLHC1-201ENST00000401408 IGKV3-7A0A075B6H7 116 aa2.38□□□□□ -2.03
CLHC1-201ENST00000401408 F8VRH5 84 aa2.38□□□□□ -2.03
CLHC1-201ENST00000401408 Q86TA4 180 aa2.38□□□□□ -2.03
CLHC1-201ENST00000401408 TXNDC17Q9BRA2 123 aa2.38□□□□□ -2.03
CLHC1-201ENST00000401408 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 A0A0J9YWU9 116 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 ZNF861PO60384 105 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 PDE6HQ13956 83 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 LRP1BQ9NZR2 4599 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 A0A1B0GUT8 65 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 AMELXQ99217 191 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 HIGD2AQ9BW72 106 aa2.37□□□□□ -2.03
CLHC1-201ENST00000401408 HMCN2Q8NDA2 5059 aa2.36□□□□□ -2.03
CLHC1-201ENST00000401408 SNRPGP62308 76 aaKnown RBP2.36□□□□□ -2.03
CLHC1-201ENST00000401408 COX7B2Q8TF08 81 aa2.36□□□□□ -2.03
CLHC1-201ENST00000401408 Q9BRP9 147 aa2.36□□□□□ -2.03
CLHC1-201ENST00000401408 R4GMQ9 66 aa2.36□□□□□ -2.03
CLHC1-201ENST00000401408 A0A1B0GVY2 172 aa2.36□□□□□ -2.03
CLHC1-201ENST00000401408 LINC01558Q9Y6Z2 57 aa2.36□□□□□ -2.03
CLHC1-201ENST00000401408 TRAV1-2A0A0B4J238 106 aa2.35□□□□□ -2.03
CLHC1-201ENST00000401408 NREPQ16612 68 aa2.35□□□□□ -2.03
CLHC1-201ENST00000401408 TNCP24821 2201 aa2.34□□□□□ -2.03
CLHC1-201ENST00000401408 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.03
CLHC1-201ENST00000401408 SMIM27A0A1W2PRY6 76 aa2.34□□□□□ -2.03
CLHC1-201ENST00000401408 M0R135 149 aa2.34□□□□□ -2.03
CLHC1-201ENST00000401408 CTSGP08311 255 aa2.34□□□□□ -2.03
CLHC1-201ENST00000401408 CCL3L1P16619 93 aa2.34□□□□□ -2.03
CLHC1-201ENST00000401408 SERF2P84101 59 aa2.34□□□□□ -2.04
CLHC1-201ENST00000401408 V9GYV3 84 aa2.34□□□□□ -2.04
CLHC1-201ENST00000401408 RNF213Q63HN8 5207 aa2.34□□□□□ -2.04
CLHC1-201ENST00000401408 NDUFB1O75438 58 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 CCL18P55774 89 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 ENHOQ6UWT2 76 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 TMEM263Q8WUH6 116 aaKnown RBP2.33□□□□□ -2.04
CLHC1-201ENST00000401408 LINC00846Q9NV44 126 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 R4GN34 69 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 IGKV3OR2-268A0A0C4DH90 116 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 HMGA2P52926 109 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 LINC00612Q8N6U2 182 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 WFDC6Q9BQY6 131 aa2.33□□□□□ -2.04
CLHC1-201ENST00000401408 FAT1Q14517 4588 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 IGKV3-20P01619 116 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 Q6ZTI0 123 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 C4orf3Q8WVX3 66 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 DNAH5Q8TE73 4624 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 TRAV21A0A0B4J279 112 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 CTXND1A0A1B0GTU2 59 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 H3BUX3 64 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 J3QRE1 110 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 UQCR11O14957 56 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 IGKV2-30P06310 120 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 MRGPRG-AS1Q2M3A8 158 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 HCP5Q6MZN7 132 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 LINC00208Q96KT6 92 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 PLAC8Q9NZF1 115 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 PSORS1C2Q9UIG4 136 aa2.32□□□□□ -2.04
CLHC1-201ENST00000401408 IGLV3-1P01715 115 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 MGPP08493 103 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 PDE6GP18545 87 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 PLNP26678 52 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 KRTAP15-1Q3LI76 137 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 SPINT4Q6UDR6 99 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 UBL5Q9BZL1 73 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 PRO2289Q9P1D8 64 aa2.31□□□□□ -2.04
CLHC1-201ENST00000401408 H0Y9P7 68 aa2.3□□□□□ -2.04
CLHC1-201ENST00000401408 RNASE3P12724 160 aaKnown RBP2.3□□□□□ -2.04
CLHC1-201ENST00000401408 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
CLHC1-201ENST00000401408 SPINK7P58062 85 aa2.3□□□□□ -2.04
CLHC1-201ENST00000401408 RPS27LQ71UM5 84 aaKnown RBP2.3□□□□□ -2.04
CLHC1-201ENST00000401408 KAAG1Q9UBP8 84 aa2.3□□□□□ -2.04
CLHC1-201ENST00000401408 JMJD7-PLA2G4BH0Y9G9 81 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 SPINK4O60575 86 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 C10orf99Q6UWK7 81 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 WFDC10AQ9H1F0 79 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 TIMM8BQ9Y5J9 83 aaPredicted RBP2.29□□□□□ -2.04
CLHC1-201ENST00000401408 LY6G6CO95867 125 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 ZNF137PP52743 207 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 LY6EQ16553 131 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 OBSCN-AS1Q96MR7 158 aa2.29□□□□□ -2.04
CLHC1-201ENST00000401408 TRBV6-4A0A1B0GX49 114 aa2.28□□□□□ -2.04
CLHC1-201ENST00000401408 C10orf113Q5VZT2 155 aa2.28□□□□□ -2.04
CLHC1-201ENST00000401408 PRB3Q04118 309 aaPredicted RBP2.27□□□□□ -2.05
CLHC1-201ENST00000401408 SPRR4Q96PI1 79 aa2.27□□□□□ -2.05
CLHC1-201ENST00000401408 KLK9Q9UKQ9 250 aa2.27□□□□□ -2.05
CLHC1-201ENST00000401408 TRBV6-1A0A0K0K1D8 114 aa2.27□□□□□ -2.05
CLHC1-201ENST00000401408 KRTAP29-1A8MX34 341 aaPredicted RBP2.27□□□□□ -2.05
CLHC1-201ENST00000401408 M0R1W7 72 aa2.27□□□□□ -2.05
CLHC1-201ENST00000401408 FXYD6P3P58550 94 aa2.27□□□□□ -2.05
CLHC1-201ENST00000401408 LINC00322Q6ZN03 302 aaPredicted RBP2.27□□□□□ -2.05
CLHC1-201ENST00000401408 SPATA8Q6RVD6 105 aa2.26□□□□□ -2.05
CLHC1-201ENST00000401408 A0A087WTM6 91 aa2.26□□□□□ -2.05
CLHC1-201ENST00000401408 IGKV2-40A0A087WW87 121 aaPredicted RBP2.26□□□□□ -2.05
CLHC1-201ENST00000401408 A0A0G2JQZ4 141 aa2.26□□□□□ -2.05
CLHC1-201ENST00000401408 IGKV2D-40P01614 121 aaPredicted RBP2.26□□□□□ -2.05
CLHC1-201ENST00000401408 KRTAP10-6P60371 365 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms