RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 Q5VSD8 79 aa9.11□□□□□ -0.95
GABPA-202ENST00000400075 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
GABPA-202ENST00000400075 RBM12B-AS1Q9P1G2 102 aa9.1□□□□□ -0.95
GABPA-202ENST00000400075 A0A0G2JQZ4 141 aa9.09□□□□□ -0.95
GABPA-202ENST00000400075 KRTAP1-5Q9BYS1 174 aa9.09□□□□□ -0.95
GABPA-202ENST00000400075 BRK1Q8WUW1 75 aa9.08□□□□□ -0.96
GABPA-202ENST00000400075 ACYP2P14621 99 aa9.08□□□□□ -0.96
GABPA-202ENST00000400075 A0A1B0GVX0 72 aa9.06□□□□□ -0.96
GABPA-202ENST00000400075 EYSQ5T1H1 3165 aa9.06□□□□□ -0.96
GABPA-202ENST00000400075 CELSR3Q9NYQ7 3312 aa9.05□□□□□ -0.96
GABPA-202ENST00000400075 ADGRG4Q8IZF6 3080 aa9.05□□□□□ -0.96
GABPA-202ENST00000400075 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
GABPA-202ENST00000400075 LOC101927531A0A1B0GV80 90 aa9.05□□□□□ -0.96
GABPA-202ENST00000400075 Q6ZSA8 131 aa9.05□□□□□ -0.96
GABPA-202ENST00000400075 VCANP13611 3396 aa9.05□□□□□ -0.96
GABPA-202ENST00000400075 SVIPQ8NHG7 77 aa9.04□□□□□ -0.96
GABPA-202ENST00000400075 LRBAP50851 2863 aa9.04□□□□□ -0.96
GABPA-202ENST00000400075 FAM229BQ4G0N7 80 aa9.03□□□□□ -0.96
GABPA-202ENST00000400075 K7EQZ3 153 aa9.03□□□□□ -0.96
GABPA-202ENST00000400075 H3BPC8 53 aa9.03□□□□□ -0.96
GABPA-202ENST00000400075 CELSR2Q9HCU4 2923 aa9.03□□□□□ -0.96
GABPA-202ENST00000400075 KRTAP10-1P60331 282 aa9.02□□□□□ -0.96
GABPA-202ENST00000400075 PRR15Q8IV56 129 aa9.02□□□□□ -0.97
GABPA-202ENST00000400075 KRTAP10-2P60368 255 aa9.02□□□□□ -0.97
GABPA-202ENST00000400075 SMCPP49901 116 aaPredicted RBP9.02□□□□□ -0.97
GABPA-202ENST00000400075 CCDC179H3BU77 68 aa9□□□□□ -0.97
GABPA-202ENST00000400075 DMXL1Q9Y485 3027 aa8.98□□□□□ -0.97
GABPA-202ENST00000400075 M0R2T5 61 aa8.98□□□□□ -0.97
GABPA-202ENST00000400075 Q6ZR54 194 aa8.97□□□□□ -0.97
GABPA-202ENST00000400075 ZANQ9Y493 2812 aa8.97□□□□□ -0.97
GABPA-202ENST00000400075 CD164Q04900 197 aa8.97□□□□□ -0.97
GABPA-202ENST00000400075 FREM2Q5SZK8 3169 aa8.96□□□□□ -0.97
GABPA-202ENST00000400075 SMIM26A0A096LP01 95 aa8.95□□□□□ -0.98
GABPA-202ENST00000400075 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
GABPA-202ENST00000400075 A0A1B0GU69 56 aa8.93□□□□□ -0.98
GABPA-202ENST00000400075 DCHS2Q6V1P9 2916 aa8.92□□□□□ -0.98
GABPA-202ENST00000400075 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
GABPA-202ENST00000400075 ASH1LQ9NR48 2969 aaKnown RBP8.88□□□□□ -0.99
GABPA-202ENST00000400075 TENM3Q9P273 2699 aa8.87□□□□□ -0.99
GABPA-202ENST00000400075 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
GABPA-202ENST00000400075 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
GABPA-202ENST00000400075 FAM104AQ969W3 186 aa8.84□□□□□ -0.99
GABPA-202ENST00000400075 NF1P21359 2839 aa8.84□□□□□ -0.99
GABPA-202ENST00000400075 PSPHP1O15172 72 aa8.84□□□□□ -0.99
GABPA-202ENST00000400075 A0A0U1RQV1 116 aa8.83□□□□□ -1
GABPA-202ENST00000400075 KRTAP26-1Q6PEX3 210 aa8.81□□□□□ -1
GABPA-202ENST00000400075 IGLV8-61A0A075B6I0 122 aa8.8□□□□□ -1
GABPA-202ENST00000400075 SPRR1AP35321 89 aa8.79□□□□□ -1
GABPA-202ENST00000400075 OXTP01178 125 aa8.77□□□□□ -1.01
GABPA-202ENST00000400075 TENM1Q9UKZ4 2725 aa8.75□□□□□ -1.01
GABPA-202ENST00000400075 CFAP47Q6ZTR5 3102 aa8.74□□□□□ -1.01
GABPA-202ENST00000400075 Q8N1X5 172 aa8.73□□□□□ -1.01
GABPA-202ENST00000400075 LINC01554Q52M75 96 aa8.71□□□□□ -1.01
GABPA-202ENST00000400075 PANO1I0J062 215 aa8.71□□□□□ -1.02
GABPA-202ENST00000400075 SPRR1BP22528 89 aa8.7□□□□□ -1.02
GABPA-202ENST00000400075 LINC01600Q96MT4 127 aa8.7□□□□□ -1.02
GABPA-202ENST00000400075 MXRA5Q9NR99 2828 aa8.7□□□□□ -1.02
GABPA-202ENST00000400075 Q8NDZ9 215 aa8.69□□□□□ -1.02
GABPA-202ENST00000400075 TENM2Q9NT68 2774 aa8.68□□□□□ -1.02
GABPA-202ENST00000400075 Q6ZRN7 208 aaPredicted RBP8.66□□□□□ -1.02
GABPA-202ENST00000400075 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
GABPA-202ENST00000400075 FP248Q71RG6 208 aaPredicted RBP8.65□□□□□ -1.02
GABPA-202ENST00000400075 USP34Q70CQ2 3546 aa8.65□□□□□ -1.03
GABPA-202ENST00000400075 PMAIP1Q13794 54 aa8.64□□□□□ -1.03
GABPA-202ENST00000400075 COA5Q86WW8 74 aa8.64□□□□□ -1.03
GABPA-202ENST00000400075 ZCCHC13Q8WW36 166 aaKnown RBP8.62□□□□□ -1.03
GABPA-202ENST00000400075 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
GABPA-202ENST00000400075 SPEGQ15772 3267 aa8.61□□□□□ -1.03
GABPA-202ENST00000400075 FBN2P35556 2912 aa8.59□□□□□ -1.03
GABPA-202ENST00000400075 C1orf195Q5TG92 126 aa8.58□□□□□ -1.04
GABPA-202ENST00000400075 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
GABPA-202ENST00000400075 DNAH14Q0VDD8 3507 aa8.56□□□□□ -1.04
GABPA-202ENST00000400075 SPINK7P58062 85 aa8.55□□□□□ -1.04
GABPA-202ENST00000400075 UQCR11O14957 56 aa8.55□□□□□ -1.04
GABPA-202ENST00000400075 A0A087X002 238 aa8.54□□□□□ -1.04
GABPA-202ENST00000400075 DCHS1Q96JQ0 3298 aa8.51□□□□□ -1.05
GABPA-202ENST00000400075 LINC00483Q53H64 154 aa8.51□□□□□ -1.05
GABPA-202ENST00000400075 HRNRQ86YZ3 2850 aaPredicted RBP8.5□□□□□ -1.05
GABPA-202ENST00000400075 LOC400499M0QZD8 3231 aa8.5□□□□□ -1.05
GABPA-202ENST00000400075 SPTBN5Q9NRC6 3674 aaKnown RBP8.5□□□□□ -1.05
GABPA-202ENST00000400075 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
GABPA-202ENST00000400075 A8MUN3 132 aa8.49□□□□□ -1.05
GABPA-202ENST00000400075 MMP24-AS1A0A0U1RRL7 71 aa8.48□□□□□ -1.05
GABPA-202ENST00000400075 LINC00472Q9H8W2 130 aa8.48□□□□□ -1.05
GABPA-202ENST00000400075 A0A0D9SG42 100 aa8.47□□□□□ -1.05
GABPA-202ENST00000400075 KLKP1Q107X0 134 aa8.47□□□□□ -1.05
GABPA-202ENST00000400075 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
GABPA-202ENST00000400075 HRES1P13985 223 aa8.45□□□□□ -1.06
GABPA-202ENST00000400075 S4R3F8 94 aa8.43□□□□□ -1.06
GABPA-202ENST00000400075 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
GABPA-202ENST00000400075 MYO15AQ9UKN7 3530 aa8.41□□□□□ -1.06
GABPA-202ENST00000400075 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
GABPA-202ENST00000400075 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
GABPA-202ENST00000400075 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
GABPA-202ENST00000400075 Q5W150 140 aa8.37□□□□□ -1.07
GABPA-202ENST00000400075 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
GABPA-202ENST00000400075 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
GABPA-202ENST00000400075 VWFP04275 2813 aa8.36□□□□□ -1.07
GABPA-202ENST00000400075 KRTAP11-1Q8IUC1 163 aa8.36□□□□□ -1.07
GABPA-202ENST00000400075 CYP4F30PQ9H0H9 118 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms