RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 FABP4P15090 132 aa8.8□□□□□ -1
UFD1-202ENST00000399523 YPEL4Q96NS1 127 aa8.8□□□□□ -1
UFD1-202ENST00000399523 MUC12Q9UKN1 5478 aa8.79□□□□□ -1
UFD1-202ENST00000399523 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
UFD1-202ENST00000399523 A6NDN8 102 aa8.78□□□□□ -1
UFD1-202ENST00000399523 ZNF815PA8K554 130 aa8.78□□□□□ -1
UFD1-202ENST00000399523 OCIAD2Q56VL3 154 aa8.78□□□□□ -1
UFD1-202ENST00000399523 KRTAP20-1Q3LI63 56 aa8.76□□□□□ -1.01
UFD1-202ENST00000399523 SLC7A5P1Q8MH63 180 aa8.74□□□□□ -1.01
UFD1-202ENST00000399523 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
UFD1-202ENST00000399523 NOTCH2NLQ7Z3S9 236 aa8.72□□□□□ -1.01
UFD1-202ENST00000399523 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
UFD1-202ENST00000399523 Q6ZQY7 126 aa8.71□□□□□ -1.02
UFD1-202ENST00000399523 APOC3P02656 99 aa8.7□□□□□ -1.02
UFD1-202ENST00000399523 LINC00575Q6W349 94 aa8.7□□□□□ -1.02
UFD1-202ENST00000399523 COPS9Q8WXC6 57 aa8.7□□□□□ -1.02
UFD1-202ENST00000399523 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
UFD1-202ENST00000399523 SNAPINO95295 136 aa8.69□□□□□ -1.02
UFD1-202ENST00000399523 IFITM1P13164 125 aa8.69□□□□□ -1.02
UFD1-202ENST00000399523 DSCR10P59022 87 aa8.69□□□□□ -1.02
UFD1-202ENST00000399523 TRGC2P03986 189 aa8.67□□□□□ -1.02
UFD1-202ENST00000399523 hADV29S1A0JD25 119 aa8.66□□□□□ -1.02
UFD1-202ENST00000399523 VAMP3Q15836 100 aa8.66□□□□□ -1.02
UFD1-202ENST00000399523 SVBPQ8N300 66 aa8.66□□□□□ -1.02
UFD1-202ENST00000399523 SYS1-DBNDD2H3BUS1 97 aa8.65□□□□□ -1.02
UFD1-202ENST00000399523 A8MWP4 228 aa8.64□□□□□ -1.03
UFD1-202ENST00000399523 Q6ZVH6 145 aa8.64□□□□□ -1.03
UFD1-202ENST00000399523 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
UFD1-202ENST00000399523 H3BUT2 72 aa8.63□□□□□ -1.03
UFD1-202ENST00000399523 ANKRD39Q53RE8 183 aa8.63□□□□□ -1.03
UFD1-202ENST00000399523 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
UFD1-202ENST00000399523 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
UFD1-202ENST00000399523 MTURNQ8N3F0 131 aa8.63□□□□□ -1.03
UFD1-202ENST00000399523 SCGB1D1O95968 90 aa8.62□□□□□ -1.03
UFD1-202ENST00000399523 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
UFD1-202ENST00000399523 PPDPFLQ8WWR9 84 aa8.61□□□□□ -1.03
UFD1-202ENST00000399523 LINC00313P59037 77 aa8.6□□□□□ -1.03
UFD1-202ENST00000399523 NDUFA5Q16718 116 aa8.6□□□□□ -1.03
UFD1-202ENST00000399523 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.6□□□□□ -1.03
UFD1-202ENST00000399523 SNHG12Q9BXW3 62 aa8.6□□□□□ -1.03
UFD1-202ENST00000399523 TEN1Q86WV5 123 aa8.58□□□□□ -1.04
UFD1-202ENST00000399523 A0A087WSZ3 146 aa8.56□□□□□ -1.04
UFD1-202ENST00000399523 COLCA2A8K830 154 aa8.55□□□□□ -1.04
UFD1-202ENST00000399523 PET117Q6UWS5 81 aa8.54□□□□□ -1.04
UFD1-202ENST00000399523 SIGMAR1Q99720 223 aa8.52□□□□□ -1.05
UFD1-202ENST00000399523 MDN1Q9NU22 5596 aa8.44□□□□□ -1.06
UFD1-202ENST00000399523 IGKV4-1P06312 121 aa8.44□□□□□ -1.06
UFD1-202ENST00000399523 KRTAP5-9P26371 169 aa8.44□□□□□ -1.06
UFD1-202ENST00000399523 SPINK7P58062 85 aa8.44□□□□□ -1.06
UFD1-202ENST00000399523 KMT2DO14686 5537 aa8.44□□□□□ -1.06
UFD1-202ENST00000399523 C3orf79P0CE67 100 aa8.42□□□□□ -1.06
UFD1-202ENST00000399523 NDUFV3P56181 108 aaKnown RBP8.42□□□□□ -1.06
UFD1-202ENST00000399523 BVES-AS1Q5T3Y7 98 aa8.42□□□□□ -1.06
UFD1-202ENST00000399523 A6NN06 94 aa8.41□□□□□ -1.06
UFD1-202ENST00000399523 C12orf57Q99622 126 aa8.4□□□□□ -1.06
UFD1-202ENST00000399523 A0A1W2PNM2 257 aa8.38□□□□□ -1.07
UFD1-202ENST00000399523 ZCCHC13Q8WW36 166 aaKnown RBP8.38□□□□□ -1.07
UFD1-202ENST00000399523 KRTAP2-3P0C7H8 128 aa8.37□□□□□ -1.07
UFD1-202ENST00000399523 KRTAP2-4Q9BYR9 128 aa8.37□□□□□ -1.07
UFD1-202ENST00000399523 H3BMG7 143 aa8.36□□□□□ -1.07
UFD1-202ENST00000399523 IGHV6-1A0A0B4J1U7 121 aa8.35□□□□□ -1.07
UFD1-202ENST00000399523 KRTDAPP60985 99 aa8.34□□□□□ -1.07
UFD1-202ENST00000399523 GHRHP01286 108 aa8.33□□□□□ -1.08
UFD1-202ENST00000399523 WFDC13Q8IUB5 93 aa8.33□□□□□ -1.08
UFD1-202ENST00000399523 LINC00472Q9H8W2 130 aa8.33□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 DEFB116Q30KQ4 102 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
UFD1-202ENST00000399523 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
UFD1-202ENST00000399523 FAM218AQ96MZ4 157 aa8.31□□□□□ -1.08
UFD1-202ENST00000399523 S100A1P23297 94 aa8.29□□□□□ -1.08
UFD1-202ENST00000399523 TRBV7-4A0A0J9YYF1 115 aa8.28□□□□□ -1.08
UFD1-202ENST00000399523 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
UFD1-202ENST00000399523 SNCGO76070 127 aa8.28□□□□□ -1.08
UFD1-202ENST00000399523 MT1BP07438 61 aa8.26□□□□□ -1.09
UFD1-202ENST00000399523 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
UFD1-202ENST00000399523 A0A1B0GVX0 72 aa8.23□□□□□ -1.09
UFD1-202ENST00000399523 H0YGX0 51 aa8.23□□□□□ -1.09
UFD1-202ENST00000399523 SNRPEP62304 92 aaKnown RBP8.23□□□□□ -1.09
UFD1-202ENST00000399523 FABP2P12104 132 aa8.22□□□□□ -1.09
UFD1-202ENST00000399523 KRTAP10-5P60370 271 aa8.22□□□□□ -1.09
UFD1-202ENST00000399523 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
UFD1-202ENST00000399523 ANKRD29Q8N6D5 301 aa8.21□□□□□ -1.1
UFD1-202ENST00000399523 Q5VV11 94 aa8.18□□□□□ -1.1
UFD1-202ENST00000399523 COA6Q5JTJ3 125 aaKnown RBP8.17□□□□□ -1.1
UFD1-202ENST00000399523 A0A1B0GX51 115 aa8.15□□□□□ -1.1
UFD1-202ENST00000399523 KRTAP19-8Q3LI54 63 aa8.15□□□□□ -1.1
UFD1-202ENST00000399523 TRACP01848 142 aa8.13□□□□□ -1.11
UFD1-202ENST00000399523 CCKP06307 115 aa8.12□□□□□ -1.11
UFD1-202ENST00000399523 HIST1H4GQ99525 98 aa8.12□□□□□ -1.11
UFD1-202ENST00000399523 A0A1B0GV72 72 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms