RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RTL8CO15255 209 aa10.95□□□□□ -0.66
HLA-DQB1-204ENST00000399084 RPL37AP61513 92 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-204ENST00000399084 RPS28P62857 69 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-204ENST00000399084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-204ENST00000399084 PANO1I0J062 215 aa10.93□□□□□ -0.66
HLA-DQB1-204ENST00000399084 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB1-204ENST00000399084 C20orf197Q8N268 126 aa10.93□□□□□ -0.66
HLA-DQB1-204ENST00000399084 PLAC8Q9NZF1 115 aa10.93□□□□□ -0.66
HLA-DQB1-204ENST00000399084 NDUFC1O43677 76 aa10.92□□□□□ -0.66
HLA-DQB1-204ENST00000399084 ZNF706Q9Y5V0 76 aaPredicted RBP10.92□□□□□ -0.66
HLA-DQB1-204ENST00000399084 CSMD3Q7Z407 3707 aa10.91□□□□□ -0.66
HLA-DQB1-204ENST00000399084 Q8N9L7 120 aa10.91□□□□□ -0.66
HLA-DQB1-204ENST00000399084 DSCR10P59022 87 aa10.9□□□□□ -0.66
HLA-DQB1-204ENST00000399084 TENM2Q9NT68 2774 aa10.9□□□□□ -0.66
HLA-DQB1-204ENST00000399084 OCR1Q9BZK8 76 aa10.89□□□□□ -0.67
HLA-DQB1-204ENST00000399084 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
HLA-DQB1-204ENST00000399084 DNAH10Q8IVF4 4471 aa10.87□□□□□ -0.67
HLA-DQB1-204ENST00000399084 VPS13DQ5THJ4 4388 aa10.87□□□□□ -0.67
HLA-DQB1-204ENST00000399084 LINC00483Q53H64 154 aa10.87□□□□□ -0.67
HLA-DQB1-204ENST00000399084 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
HLA-DQB1-204ENST00000399084 A0A087WSZ3 146 aa10.87□□□□□ -0.67
HLA-DQB1-204ENST00000399084 PLECQ15149 4684 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB1-204ENST00000399084 LYSTQ99698 3801 aa10.85□□□□□ -0.67
HLA-DQB1-204ENST00000399084 DNAH7Q8WXX0 4024 aa10.85□□□□□ -0.67
HLA-DQB1-204ENST00000399084 J3KT08 172 aa10.84□□□□□ -0.67
HLA-DQB1-204ENST00000399084 WWC2-AS2Q96NR7 200 aa10.84□□□□□ -0.67
HLA-DQB1-204ENST00000399084 TMEM254Q8TBM7 123 aa10.82□□□□□ -0.68
HLA-DQB1-204ENST00000399084 H7BZZ5 65 aa10.81□□□□□ -0.68
HLA-DQB1-204ENST00000399084 K7EQZ3 153 aa10.81□□□□□ -0.68
HLA-DQB1-204ENST00000399084 ZNF861PO60384 105 aa10.81□□□□□ -0.68
HLA-DQB1-204ENST00000399084 LY6G6CO95867 125 aa10.81□□□□□ -0.68
HLA-DQB1-204ENST00000399084 PSORS1C2Q9UIG4 136 aa10.81□□□□□ -0.68
HLA-DQB1-204ENST00000399084 HCG22E2RYF7 251 aa10.81□□□□□ -0.68
HLA-DQB1-204ENST00000399084 LCE6AA0A183 80 aa10.78□□□□□ -0.68
HLA-DQB1-204ENST00000399084 ATP5EP56381 51 aaPredicted RBP10.78□□□□□ -0.68
HLA-DQB1-204ENST00000399084 LINC00472Q9H8W2 130 aa10.78□□□□□ -0.68
HLA-DQB1-204ENST00000399084 A0A0G2JQZ4 141 aa10.78□□□□□ -0.68
HLA-DQB1-204ENST00000399084 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
HLA-DQB1-204ENST00000399084 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
HLA-DQB1-204ENST00000399084 A0A0U1RQV1 116 aa10.75□□□□□ -0.69
HLA-DQB1-204ENST00000399084 A8MWP4 228 aa10.75□□□□□ -0.69
HLA-DQB1-204ENST00000399084 C5orf47Q569G3 176 aa10.75□□□□□ -0.69
HLA-DQB1-204ENST00000399084 SNURFQ9Y675 71 aa10.75□□□□□ -0.69
HLA-DQB1-204ENST00000399084 STARD9Q9P2P6 4700 aa10.75□□□□□ -0.69
HLA-DQB1-204ENST00000399084 PRR15Q8IV56 129 aa10.74□□□□□ -0.69
HLA-DQB1-204ENST00000399084 KMT2CQ8NEZ4 4911 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-204ENST00000399084 NDUFB1O75438 58 aa10.7□□□□□ -0.7
HLA-DQB1-204ENST00000399084 IGLV7-43P04211 117 aa10.7□□□□□ -0.7
HLA-DQB1-204ENST00000399084 RYR3Q15413 4870 aa10.7□□□□□ -0.7
HLA-DQB1-204ENST00000399084 IGLV9-49A0A0B4J1Y8 123 aa10.69□□□□□ -0.7
HLA-DQB1-204ENST00000399084 FAM30AQ9NZY2 134 aa10.69□□□□□ -0.7
HLA-DQB1-204ENST00000399084 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
HLA-DQB1-204ENST00000399084 DEFB116Q30KQ4 102 aa10.67□□□□□ -0.7
HLA-DQB1-204ENST00000399084 SERP1Q9Y6X1 66 aa10.67□□□□□ -0.7
HLA-DQB1-204ENST00000399084 CASC2Q6XLA1 102 aa10.64□□□□□ -0.71
HLA-DQB1-204ENST00000399084 H3BPC8 53 aa10.63□□□□□ -0.71
HLA-DQB1-204ENST00000399084 CD164Q04900 197 aa10.63□□□□□ -0.71
HLA-DQB1-204ENST00000399084 Q6ZSA8 131 aa10.63□□□□□ -0.71
HLA-DQB1-204ENST00000399084 MOBPQ13875 183 aa10.61□□□□□ -0.71
HLA-DQB1-204ENST00000399084 SSBP3-AS1Q7Z2R9 100 aa10.61□□□□□ -0.71
HLA-DQB1-204ENST00000399084 MP68P56378 58 aa10.61□□□□□ -0.71
HLA-DQB1-204ENST00000399084 WFDC13Q8IUB5 93 aa10.61□□□□□ -0.71
HLA-DQB1-204ENST00000399084 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
HLA-DQB1-204ENST00000399084 ZCCHC13Q8WW36 166 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB1-204ENST00000399084 DNAH6Q9C0G6 4158 aa10.6□□□□□ -0.71
HLA-DQB1-204ENST00000399084 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
HLA-DQB1-204ENST00000399084 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
HLA-DQB1-204ENST00000399084 Q96NJ1 140 aa10.59□□□□□ -0.71
HLA-DQB1-204ENST00000399084 SRRM2Q9UQ35 2752 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-204ENST00000399084 HECTD4Q9Y4D8 3996 aa10.57□□□□□ -0.72
HLA-DQB1-204ENST00000399084 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
HLA-DQB1-204ENST00000399084 ASB16-AS1Q495Z4 193 aa10.55□□□□□ -0.72
HLA-DQB1-204ENST00000399084 KMT2AQ03164 3969 aa10.54□□□□□ -0.72
HLA-DQB1-204ENST00000399084 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
HLA-DQB1-204ENST00000399084 TP53AIP1Q9HCN2 124 aa10.54□□□□□ -0.72
HLA-DQB1-204ENST00000399084 DNAH2Q9P225 4427 aa10.54□□□□□ -0.72
HLA-DQB1-204ENST00000399084 hDV103S1A0JD37 113 aa10.53□□□□□ -0.72
HLA-DQB1-204ENST00000399084 FAM229BQ4G0N7 80 aa10.52□□□□□ -0.73
HLA-DQB1-204ENST00000399084 A0A1B0GVX0 72 aa10.51□□□□□ -0.73
HLA-DQB1-204ENST00000399084 OXTP01178 125 aa10.5□□□□□ -0.73
HLA-DQB1-204ENST00000399084 KRTAP10-1P60331 282 aa10.5□□□□□ -0.73
HLA-DQB1-204ENST00000399084 HRCT1Q6UXD1 115 aa10.5□□□□□ -0.73
HLA-DQB1-204ENST00000399084 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
HLA-DQB1-204ENST00000399084 C8orf17Q9NRJ1 99 aa10.49□□□□□ -0.73
HLA-DQB1-204ENST00000399084 SMIM26A0A096LP01 95 aa10.48□□□□□ -0.73
HLA-DQB1-204ENST00000399084 ALMS1Q8TCU4 4167 aa10.47□□□□□ -0.73
HLA-DQB1-204ENST00000399084 H0Y9P7 68 aa10.46□□□□□ -0.74
HLA-DQB1-204ENST00000399084 Q5XG85 94 aa10.45□□□□□ -0.74
HLA-DQB1-204ENST00000399084 TRAV22A0A0B4J277 110 aa10.44□□□□□ -0.74
HLA-DQB1-204ENST00000399084 LINC00208Q96KT6 92 aa10.44□□□□□ -0.74
HLA-DQB1-204ENST00000399084 CYP4F30PQ9H0H9 118 aa10.44□□□□□ -0.74
HLA-DQB1-204ENST00000399084 LINC00336Q6ZUF6 198 aa10.43□□□□□ -0.74
HLA-DQB1-204ENST00000399084 SPANXA2-OT1Q8N9U9 137 aa10.42□□□□□ -0.74
HLA-DQB1-204ENST00000399084 IGHV6-1A0A0B4J1U7 121 aa10.4□□□□□ -0.74
HLA-DQB1-204ENST00000399084 MRPL34Q9BQ48 92 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB1-204ENST00000399084 BIRC6Q9NR09 4857 aa10.39□□□□□ -0.75
HLA-DQB1-204ENST00000399084 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
HLA-DQB1-204ENST00000399084 C1orf64Q8NEQ6 169 aa10.38□□□□□ -0.75
HLA-DQB1-204ENST00000399084 DNAH8Q96JB1 4490 aa10.38□□□□□ -0.75
HLA-DQB1-204ENST00000399084 EPPK1P58107 5090 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms