RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ITPR3Q14573 2671 aa3.3□□□□□ -1.88
SMAD4-202ENST00000398417 Q6ZQT0 140 aa3.29□□□□□ -1.88
SMAD4-202ENST00000398417 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
SMAD4-202ENST00000398417 LINC01556Q5JQF7 62 aa3.29□□□□□ -1.88
SMAD4-202ENST00000398417 MUC7Q8TAX7 377 aa3.29□□□□□ -1.88
SMAD4-202ENST00000398417 C1orf137Q5JT78 98 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 STAB2Q8WWQ8 2551 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 PDZD2O15018 2839 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 CASC10Q5T4H9 136 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 UQCR11O14957 56 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 PCOTHQ58A44 107 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 ST20-AS1Q8NBB2 130 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 C1orf64Q8NEQ6 169 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 RBM12B-AS1Q9P1G2 102 aa3.28□□□□□ -1.88
SMAD4-202ENST00000398417 ELOF1P60002 83 aaKnown RBP3.27□□□□□ -1.89
SMAD4-202ENST00000398417 LINC00474Q9P2X8 69 aa3.27□□□□□ -1.89
SMAD4-202ENST00000398417 OBSCN-AS1Q96MR7 158 aa3.27□□□□□ -1.89
SMAD4-202ENST00000398417 USP9YO00507 2555 aaPredicted RBP3.26□□□□□ -1.89
SMAD4-202ENST00000398417 PRR34Q9NV39 138 aa3.26□□□□□ -1.89
SMAD4-202ENST00000398417 APLNQ9ULZ1 77 aa3.26□□□□□ -1.89
SMAD4-202ENST00000398417 Q6ZRP5 223 aa3.26□□□□□ -1.89
SMAD4-202ENST00000398417 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
SMAD4-202ENST00000398417 STAB1Q9NY15 2570 aa3.26□□□□□ -1.89
SMAD4-202ENST00000398417 C1orf134Q5TEV5 83 aa3.26□□□□□ -1.89
SMAD4-202ENST00000398417 LINC00476Q8WZB0 136 aa3.26□□□□□ -1.89
SMAD4-202ENST00000398417 GVQW2A0A096LPI5 108 aaPredicted RBP3.25□□□□□ -1.89
SMAD4-202ENST00000398417 TYMSOSQ8TAI1 123 aa3.25□□□□□ -1.89
SMAD4-202ENST00000398417 CYSTM1Q9H1C7 97 aa3.25□□□□□ -1.89
SMAD4-202ENST00000398417 A0A0G2JQZ4 141 aa3.25□□□□□ -1.89
SMAD4-202ENST00000398417 A0A1W2PNN7 141 aa3.25□□□□□ -1.89
SMAD4-202ENST00000398417 FAM168BA1KXE4 195 aa3.25□□□□□ -1.89
SMAD4-202ENST00000398417 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
SMAD4-202ENST00000398417 LYSTQ99698 3801 aa3.24□□□□□ -1.89
SMAD4-202ENST00000398417 COA5Q86WW8 74 aa3.24□□□□□ -1.89
SMAD4-202ENST00000398417 LINC00588Q9Y4M8 146 aa3.24□□□□□ -1.89
SMAD4-202ENST00000398417 H0Y9P7 68 aa3.24□□□□□ -1.89
SMAD4-202ENST00000398417 DMAC1Q96GE9 116 aa3.24□□□□□ -1.89
SMAD4-202ENST00000398417 LINC00336Q6ZUF6 198 aa3.23□□□□□ -1.89
SMAD4-202ENST00000398417 LINC00208Q96KT6 92 aa3.23□□□□□ -1.89
SMAD4-202ENST00000398417 APCP25054 2843 aa3.23□□□□□ -1.89
SMAD4-202ENST00000398417 IGLV1-50A0A075B6I6 118 aa3.23□□□□□ -1.89
SMAD4-202ENST00000398417 NF1P21359 2839 aa3.23□□□□□ -1.89
SMAD4-202ENST00000398417 SPACA4Q8TDM5 124 aa3.23□□□□□ -1.89
SMAD4-202ENST00000398417 HRNRQ86YZ3 2850 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-202ENST00000398417 H3BNG1 76 aa3.22□□□□□ -1.89
SMAD4-202ENST00000398417 SMIM29Q86T20 159 aa3.22□□□□□ -1.89
SMAD4-202ENST00000398417 TLX1NBP0CAT3 122 aa3.22□□□□□ -1.89
SMAD4-202ENST00000398417 CYP4F30PQ9H0H9 118 aa3.22□□□□□ -1.89
SMAD4-202ENST00000398417 ZANQ9Y493 2812 aa3.22□□□□□ -1.89
SMAD4-202ENST00000398417 Q5XG85 94 aa3.22□□□□□ -1.89
SMAD4-202ENST00000398417 KRTAP26-1Q6PEX3 210 aa3.22□□□□□ -1.89
SMAD4-202ENST00000398417 FBN2P35556 2912 aa3.21□□□□□ -1.9
SMAD4-202ENST00000398417 OTOGQ6ZRI0 2925 aa3.21□□□□□ -1.9
SMAD4-202ENST00000398417 TRBV7-4A0A0J9YYF1 115 aa3.21□□□□□ -1.9
SMAD4-202ENST00000398417 BCE1O60756 84 aa3.2□□□□□ -1.9
SMAD4-202ENST00000398417 MIR22HGQ0VDD5 57 aa3.2□□□□□ -1.9
SMAD4-202ENST00000398417 PHF5AQ7RTV0 110 aaKnown RBP3.2□□□□□ -1.9
SMAD4-202ENST00000398417 PRR15Q8IV56 129 aa3.2□□□□□ -1.9
SMAD4-202ENST00000398417 OXTP01178 125 aa3.2□□□□□ -1.9
SMAD4-202ENST00000398417 A0A087WSZ3 146 aa3.2□□□□□ -1.9
SMAD4-202ENST00000398417 A0A1W2PNM2 257 aa3.2□□□□□ -1.9
SMAD4-202ENST00000398417 Q8N377 158 aa3.2□□□□□ -1.9
SMAD4-202ENST00000398417 Q6ZRX8 168 aa3.19□□□□□ -1.9
SMAD4-202ENST00000398417 KCNQ1DNQ9H478 68 aa3.19□□□□□ -1.9
SMAD4-202ENST00000398417 A8MUN3 132 aa3.18□□□□□ -1.9
SMAD4-202ENST00000398417 ROMO1P60602 79 aa3.18□□□□□ -1.9
SMAD4-202ENST00000398417 K7EIL1 84 aa3.18□□□□□ -1.9
SMAD4-202ENST00000398417 H7BZZ5 65 aa3.17□□□□□ -1.9
SMAD4-202ENST00000398417 KLKP1Q107X0 134 aa3.17□□□□□ -1.9
SMAD4-202ENST00000398417 EPM2AB3EWF7 344 aa3.17□□□□□ -1.9
SMAD4-202ENST00000398417 COX6B2Q6YFQ2 88 aa3.17□□□□□ -1.9
SMAD4-202ENST00000398417 DNAH10OSP0CZ25 163 aa3.16□□□□□ -1.9
SMAD4-202ENST00000398417 FP248Q71RG6 208 aaPredicted RBP3.16□□□□□ -1.9
SMAD4-202ENST00000398417 LOC101927531A0A1B0GV80 90 aa3.16□□□□□ -1.9
SMAD4-202ENST00000398417 SPINK7P58062 85 aa3.16□□□□□ -1.9
SMAD4-202ENST00000398417 MAST4O15021 2626 aa3.16□□□□□ -1.9
SMAD4-202ENST00000398417 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
SMAD4-202ENST00000398417 Q96NJ1 140 aa3.15□□□□□ -1.9
SMAD4-202ENST00000398417 K7EQZ3 153 aa3.15□□□□□ -1.91
SMAD4-202ENST00000398417 C16orf90A8MZG2 172 aa3.15□□□□□ -1.91
SMAD4-202ENST00000398417 Q1T7F1 81 aa3.15□□□□□ -1.91
SMAD4-202ENST00000398417 IGFL1Q6UW32 110 aa3.15□□□□□ -1.91
SMAD4-202ENST00000398417 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.91
SMAD4-202ENST00000398417 NOTCH1P46531 2555 aa3.15□□□□□ -1.91
SMAD4-202ENST00000398417 LINC00313P59037 77 aa3.15□□□□□ -1.91
SMAD4-202ENST00000398417 FBN1P35555 2871 aaKnown RBP3.14□□□□□ -1.91
SMAD4-202ENST00000398417 C9orf92A6NGG3 77 aa3.14□□□□□ -1.91
SMAD4-202ENST00000398417 ATRQ13535 2644 aa3.14□□□□□ -1.91
SMAD4-202ENST00000398417 KRTAP7-1Q8IUC3 87 aa3.14□□□□□ -1.91
SMAD4-202ENST00000398417 Q6ZR54 194 aa3.13□□□□□ -1.91
SMAD4-202ENST00000398417 NBEAL1Q6ZS30 2694 aa3.13□□□□□ -1.91
SMAD4-202ENST00000398417 RTL8CO15255 209 aa3.13□□□□□ -1.91
SMAD4-202ENST00000398417 FRAS1Q86XX4 4008 aa3.13□□□□□ -1.91
SMAD4-202ENST00000398417 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
SMAD4-202ENST00000398417 FLNAP21333 2647 aaKnown RBP3.11□□□□□ -1.91
SMAD4-202ENST00000398417 DSCR10P59022 87 aa3.11□□□□□ -1.91
SMAD4-202ENST00000398417 A8MWP4 228 aa3.11□□□□□ -1.91
SMAD4-202ENST00000398417 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
SMAD4-202ENST00000398417 NBDYA0A0U1RRE5 68 aa3.1□□□□□ -1.91
SMAD4-202ENST00000398417 H1FX-AS1Q4G0G2 97 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms