RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 M0R378 163 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 Q6ZRU5 148 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 LECT2O14960 151 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 RPL37AP61513 92 aaKnown RBP2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 C1orf137Q5JT78 98 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 A0A096LNI7 61 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 IGLV9-49A0A0B4J1Y8 123 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 GAS8-AS1O95177 125 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 TRAV7A0A075B6U4 112 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 LITAFQ99732 161 aa2.42□□□□□ -2.02
FNDC3A-202ENST00000398316 TRBV30A0A0K0K1B3 111 aa2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 OXTP01178 125 aa2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 COX7BP24311 80 aa2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 PRO0461Q9UI25 63 aa2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 LINC01554Q52M75 96 aa2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 CHCHD10Q8WYQ3 142 aaPredicted RBP2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 LINC00242Q5T6M2 205 aa2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 RPL39LQ96EH5 51 aaKnown RBP2.41□□□□□ -2.02
FNDC3A-202ENST00000398316 SLPIP03973 132 aa2.4□□□□□ -2.02
FNDC3A-202ENST00000398316 SPAG11AQ6PDA7 123 aa2.4□□□□□ -2.02
FNDC3A-202ENST00000398316 SPINT4Q6UDR6 99 aa2.4□□□□□ -2.02
FNDC3A-202ENST00000398316 RTL8CO15255 209 aa2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 C10orf25Q5T742 122 aa2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 OPRPNQ99935 248 aaPredicted RBP2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 PRAC1Q96KF2 57 aa2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 Q6JHZ5 121 aa2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 C15orf56Q8N910 161 aa2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 Q8N9L7 120 aa2.4□□□□□ -2.03
FNDC3A-202ENST00000398316 LINC00959A0A1B0GUT2 108 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 SMIM1B2RUZ4 78 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 SPRR1AP35321 89 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 Q6ZRP5 223 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 IGKV2-29A2NJV5 120 aaPredicted RBP2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 RYR1P21817 5038 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 COX7B2Q8TF08 81 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 LINC00167Q96N53 147 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 DHRS4-AS1Q9P1J3 65 aa2.39□□□□□ -2.03
FNDC3A-202ENST00000398316 TENM3Q9P273 2699 aa2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 KRTAP1-5Q9BYS1 174 aa2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 HERC2O95714 4834 aa2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 KRTAP13-1Q8IUC0 172 aa2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 TMEM254Q8TBM7 123 aa2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 KMT2CQ8NEZ4 4911 aaKnown RBP2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 hDV103S1A0JD37 113 aa2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 MUC17Q685J3 4493 aa2.38□□□□□ -2.03
FNDC3A-202ENST00000398316 KRTAP4-16G5E9R7 235 aaPredicted RBP2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 ATP5EP2Q5VTU8 51 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 TYMSOSQ8TAI1 123 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 BPY2O14599 106 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 LINC00313P59037 77 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 C9orf116Q5BN46 136 aaPredicted RBP2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 PLAC8Q9NZF1 115 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 WFDC10BQ8IUB3 73 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 H0YGX0 51 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 TENM2Q9NT68 2774 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
FNDC3A-202ENST00000398316 A0A087WTM6 91 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 PRR3P79522 188 aaKnown RBP2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 BIRC6Q9NR09 4857 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 IGLV4-60A0A075B6I1 120 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 TRAV22A0A0B4J277 110 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 A0A0J9YXV3 536 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 TRBV10-3A0A0K0K1G6 114 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 FP248Q71RG6 208 aaPredicted RBP2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 C9orf163Q8N9P6 203 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 Q8N814 137 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 COX6A2Q02221 97 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 SMCR5Q8TEV8 140 aa2.36□□□□□ -2.03
FNDC3A-202ENST00000398316 LINC00528Q8N1L1 170 aa2.35□□□□□ -2.03
FNDC3A-202ENST00000398316 Q8N3U1 123 aa2.35□□□□□ -2.03
FNDC3A-202ENST00000398316 SPRR1BP22528 89 aa2.35□□□□□ -2.03
FNDC3A-202ENST00000398316 SPACA4Q8TDM5 124 aa2.35□□□□□ -2.03
FNDC3A-202ENST00000398316 PSORS1C2Q9UIG4 136 aa2.35□□□□□ -2.03
FNDC3A-202ENST00000398316 SMR3BP02814 79 aaPredicted RBP2.35□□□□□ -2.03
FNDC3A-202ENST00000398316 ADAMTSL4-AS1Q5T5F5 129 aa2.35□□□□□ -2.03
FNDC3A-202ENST00000398316 KRTAP16-1A8MUX0 517 aa2.34□□□□□ -2.03
FNDC3A-202ENST00000398316 H7BZZ5 65 aa2.34□□□□□ -2.03
FNDC3A-202ENST00000398316 IGLV6-57P01721 117 aa2.34□□□□□ -2.04
FNDC3A-202ENST00000398316 KRTAP7-1Q8IUC3 87 aa2.34□□□□□ -2.04
FNDC3A-202ENST00000398316 FAM229BQ4G0N7 80 aa2.34□□□□□ -2.04
FNDC3A-202ENST00000398316 LINC00483Q53H64 154 aa2.34□□□□□ -2.04
FNDC3A-202ENST00000398316 SPINK1P00995 79 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 RPS29P62273 56 aaKnown RBP2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 SND1-IT1Q9HBX3 110 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 TNP2Q05952 138 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 Q5VSD8 79 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 HRES1P13985 223 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 IGLV8-61A0A075B6I0 122 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 RPL39P62891 51 aaKnown RBP2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 PLAC4Q8WY50 150 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 KCNQ1DNQ9H478 68 aa2.33□□□□□ -2.04
FNDC3A-202ENST00000398316 IGHV6-1A0A0B4J1U7 121 aa2.32□□□□□ -2.04
FNDC3A-202ENST00000398316 MIR7-3HGQ8N6C7 128 aa2.32□□□□□ -2.04
FNDC3A-202ENST00000398316 LINC00208Q96KT6 92 aa2.32□□□□□ -2.04
FNDC3A-202ENST00000398316 TSPEAR-AS2P59090 65 aa2.32□□□□□ -2.04
FNDC3A-202ENST00000398316 PRLHP81277 87 aa2.32□□□□□ -2.04
FNDC3A-202ENST00000398316 OBSCN-AS1Q96MR7 158 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms