RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 CHD9Q3L8U1 2897 aa0.39□□□□□ -2.35
HMGN2P39-201ENST00000398005 H3BUA1 57 aa0.39□□□□□ -2.35
HMGN2P39-201ENST00000398005 PRLHP81277 87 aa0.39□□□□□ -2.35
HMGN2P39-201ENST00000398005 POLQO75417 2590 aa0.39□□□□□ -2.35
HMGN2P39-201ENST00000398005 ZNF292O60281 2723 aa0.38□□□□□ -2.35
HMGN2P39-201ENST00000398005 ABCA12Q86UK0 2595 aa0.38□□□□□ -2.35
HMGN2P39-201ENST00000398005 CNOT1A5YKK6 2376 aaKnown RBP0.38□□□□□ -2.35
HMGN2P39-201ENST00000398005 A0A1B0GUL6 1792 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 LMO7Q8WWI1 1683 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 IQGAP2Q13576 1575 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 ZNF469Q96JG9 3925 aaPredicted RBP0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 LINC01546A6NGU7 62 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 PRM1P04553 51 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 TFF3Q07654 80 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 ANK2Q01484 3957 aa0.37□□□□□ -2.35
HMGN2P39-201ENST00000398005 TENM4Q6N022 2769 aa0.36□□□□□ -2.35
HMGN2P39-201ENST00000398005 WFDC10BQ8IUB3 73 aa0.36□□□□□ -2.35
HMGN2P39-201ENST00000398005 KAAG1Q9UBP8 84 aa0.36□□□□□ -2.35
HMGN2P39-201ENST00000398005 BPTFQ12830 3046 aa0.36□□□□□ -2.35
HMGN2P39-201ENST00000398005 PKDREJQ9NTG1 2253 aa0.35□□□□□ -2.35
HMGN2P39-201ENST00000398005 TENM3Q9P273 2699 aa0.35□□□□□ -2.35
HMGN2P39-201ENST00000398005 APCP25054 2843 aa0.35□□□□□ -2.35
HMGN2P39-201ENST00000398005 IQGAP1P46940 1657 aa0.35□□□□□ -2.35
HMGN2P39-201ENST00000398005 SMIM2Q9BVW6 85 aa0.35□□□□□ -2.35
HMGN2P39-201ENST00000398005 DDX60Q8IY21 1712 aaKnown RBP0.35□□□□□ -2.35
HMGN2P39-201ENST00000398005 NOTCH1P46531 2555 aa0.35□□□□□ -2.35
HMGN2P39-201ENST00000398005 TPRP12270 2363 aaKnown RBP0.34□□□□□ -2.35
HMGN2P39-201ENST00000398005 SPTBN1Q01082 2364 aaKnown RBP0.34□□□□□ -2.35
HMGN2P39-201ENST00000398005 NOP10Q9NPE3 64 aaKnown RBP0.34□□□□□ -2.36
HMGN2P39-201ENST00000398005 BDP1A6H8Y1 2624 aa0.34□□□□□ -2.36
HMGN2P39-201ENST00000398005 FAM208AQ9UK61 1670 aaKnown RBP0.33□□□□□ -2.36
HMGN2P39-201ENST00000398005 F8P00451 2351 aa0.33□□□□□ -2.36
HMGN2P39-201ENST00000398005 KIF21BO75037 1637 aa0.32□□□□□ -2.36
HMGN2P39-201ENST00000398005 VWFP04275 2813 aa0.32□□□□□ -2.36
HMGN2P39-201ENST00000398005 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
HMGN2P39-201ENST00000398005 MUC16Q8WXI7 14507 aa0.31□□□□□ -2.36
HMGN2P39-201ENST00000398005 AKAP6Q13023 2319 aa0.31□□□□□ -2.36
HMGN2P39-201ENST00000398005 REV3LO60673 3130 aa0.31□□□□□ -2.36
HMGN2P39-201ENST00000398005 IGLV5-48A0A075B6I7 105 aa0.31□□□□□ -2.36
HMGN2P39-201ENST00000398005 H3BNG1 76 aa0.31□□□□□ -2.36
HMGN2P39-201ENST00000398005 WNK2Q9Y3S1 2297 aa0.31□□□□□ -2.36
HMGN2P39-201ENST00000398005 ALMS1Q8TCU4 4167 aa0.31□□□□□ -2.36
HMGN2P39-201ENST00000398005 NFAT5O94916 1531 aa0.3□□□□□ -2.36
HMGN2P39-201ENST00000398005 OTOGQ6ZRI0 2925 aa0.3□□□□□ -2.36
HMGN2P39-201ENST00000398005 C9orf92A6NGG3 77 aa0.3□□□□□ -2.36
HMGN2P39-201ENST00000398005 PIEZO1Q92508 2521 aa0.3□□□□□ -2.36
HMGN2P39-201ENST00000398005 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
HMGN2P39-201ENST00000398005 AHNAKQ09666 5890 aaKnown RBP0.3□□□□□ -2.36
HMGN2P39-201ENST00000398005 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
HMGN2P39-201ENST00000398005 BSNQ9UPA5 3926 aa0.29□□□□□ -2.36
HMGN2P39-201ENST00000398005 NDUFA1O15239 70 aa0.29□□□□□ -2.36
HMGN2P39-201ENST00000398005 SPRR2DP22532 72 aa0.29□□□□□ -2.36
HMGN2P39-201ENST00000398005 KRTAP5-10Q6L8G5 202 aa0.29□□□□□ -2.36
HMGN2P39-201ENST00000398005 MUC5BQ9HC84 5762 aaPredicted RBP0.29□□□□□ -2.36
HMGN2P39-201ENST00000398005 TNXBP22105 4242 aa0.29□□□□□ -2.36
HMGN2P39-201ENST00000398005 TOP2AP11388 1531 aaKnown RBP0.28□□□□□ -2.36
HMGN2P39-201ENST00000398005 GVINP1Q7Z2Y8 2422 aa0.28□□□□□ -2.36
HMGN2P39-201ENST00000398005 KNL1Q8NG31 2342 aa0.28□□□□□ -2.36
HMGN2P39-201ENST00000398005 CELSR1Q9NYQ6 3014 aa0.27□□□□□ -2.37
HMGN2P39-201ENST00000398005 TRANK1O15050 2925 aa0.27□□□□□ -2.37
HMGN2P39-201ENST00000398005 M0QY20 66 aa0.27□□□□□ -2.37
HMGN2P39-201ENST00000398005 DEFB131AP59861 70 aa0.27□□□□□ -2.37
HMGN2P39-201ENST00000398005 CSPG4Q6UVK1 2322 aa0.27□□□□□ -2.37
HMGN2P39-201ENST00000398005 ABCA2Q9BZC7 2435 aa0.27□□□□□ -2.37
HMGN2P39-201ENST00000398005 TRPM2O94759 1503 aa0.27□□□□□ -2.37
HMGN2P39-201ENST00000398005 PDE4DIPQ5VU43 2346 aa0.26□□□□□ -2.37
HMGN2P39-201ENST00000398005 NCOR1O75376 2440 aa0.26□□□□□ -2.37
HMGN2P39-201ENST00000398005 MMP24-AS1A0A0U1RRL7 71 aa0.26□□□□□ -2.37
HMGN2P39-201ENST00000398005 ATP7AQ04656 1500 aa0.26□□□□□ -2.37
HMGN2P39-201ENST00000398005 CLTCL1P53675 1640 aa0.26□□□□□ -2.37
HMGN2P39-201ENST00000398005 SPRR2BP35325 72 aa0.25□□□□□ -2.37
HMGN2P39-201ENST00000398005 CHD6Q8TD26 2715 aa0.25□□□□□ -2.37
HMGN2P39-201ENST00000398005 FAT2Q9NYQ8 4349 aa0.25□□□□□ -2.37
HMGN2P39-201ENST00000398005 DSPP15924 2871 aaKnown RBP0.24□□□□□ -2.37
HMGN2P39-201ENST00000398005 SAMD9LQ8IVG5 1584 aa0.24□□□□□ -2.37
HMGN2P39-201ENST00000398005 UNC79Q9P2D8 2635 aa0.24□□□□□ -2.37
HMGN2P39-201ENST00000398005 A8MTW9 85 aa0.24□□□□□ -2.37
HMGN2P39-201ENST00000398005 EP300Q09472 2414 aaPredicted RBP0.24□□□□□ -2.37
HMGN2P39-201ENST00000398005 AKAP13Q12802 2813 aa0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 PKD1L1Q8TDX9 2849 aa0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 ATRQ13535 2644 aa0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 PCNX1Q96RV3 2341 aa0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 DEFB110Q30KQ9 67 aa0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 UBR5O95071 2799 aaPredicted RBP0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 ZFYVE26Q68DK2 2539 aa0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 IGF2RP11717 2491 aa0.23□□□□□ -2.37
HMGN2P39-201ENST00000398005 PHGR1C9JFL3 82 aa0.22□□□□□ -2.37
HMGN2P39-201ENST00000398005 M0QZ58 72 aa0.22□□□□□ -2.37
HMGN2P39-201ENST00000398005 TNP1P09430 55 aa0.22□□□□□ -2.37
HMGN2P39-201ENST00000398005 KMT2DO14686 5537 aa0.22□□□□□ -2.37
HMGN2P39-201ENST00000398005 LYSTQ99698 3801 aa0.22□□□□□ -2.37
HMGN2P39-201ENST00000398005 PRKDCP78527 4128 aaKnown RBP0.22□□□□□ -2.37
HMGN2P39-201ENST00000398005 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
HMGN2P39-201ENST00000398005 TNRC18O15417 2968 aaPredicted RBP0.21□□□□□ -2.38
HMGN2P39-201ENST00000398005 PTPN13Q12923 2485 aa0.2□□□□□ -2.38
HMGN2P39-201ENST00000398005 POLR2KP53803 58 aaKnown RBP0.2□□□□□ -2.38
HMGN2P39-201ENST00000398005 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
HMGN2P39-201ENST00000398005 MUC5ACP98088 5654 aa0.2□□□□□ -2.38
HMGN2P39-201ENST00000398005 SYNE1Q8NF91 8797 aaKnown RBP0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 371.4 ms