RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 RAB37Q96AX2 223 aa10.78□□□□□ -0.68
UPK3B-203ENST00000394849 LAMTOR3Q9UHA4 124 aa10.78□□□□□ -0.68
UPK3B-203ENST00000394849 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
UPK3B-203ENST00000394849 TEX49A0A1B0GTD5 131 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 H7C2G1 150 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 CFC1P0CG37 223 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 CEND1Q8N111 149 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 TMEM238LA0A1B0GVL6 79 aa10.74□□□□□ -0.69
UPK3B-203ENST00000394849 A6NJY4 79 aa10.74□□□□□ -0.69
UPK3B-203ENST00000394849 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
UPK3B-203ENST00000394849 Q1RN00 199 aa10.73□□□□□ -0.69
UPK3B-203ENST00000394849 BVES-AS1Q5T3Y7 98 aa10.73□□□□□ -0.69
UPK3B-203ENST00000394849 LINC00575Q6W349 94 aa10.72□□□□□ -0.69
UPK3B-203ENST00000394849 M0R2T5 61 aa10.71□□□□□ -0.69
UPK3B-203ENST00000394849 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 hADV29S1A0JD25 119 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 LIMD2Q9BT23 127 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 UQCR10Q9UDW1 63 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 FXYD2P54710 66 aa10.69□□□□□ -0.7
UPK3B-203ENST00000394849 HSD52Q0P140 79 aa10.69□□□□□ -0.7
UPK3B-203ENST00000394849 Q6ZQY7 126 aa10.66□□□□□ -0.7
UPK3B-203ENST00000394849 PRO1854Q9UHT4 67 aa10.66□□□□□ -0.7
UPK3B-203ENST00000394849 SMIM29Q86T20 159 aa10.65□□□□□ -0.7
UPK3B-203ENST00000394849 PRO1933Q9H354 126 aa10.65□□□□□ -0.7
UPK3B-203ENST00000394849 SNCGO76070 127 aa10.63□□□□□ -0.71
UPK3B-203ENST00000394849 HRCT1Q6UXD1 115 aa10.63□□□□□ -0.71
UPK3B-203ENST00000394849 C9orf92A6NGG3 77 aa10.62□□□□□ -0.71
UPK3B-203ENST00000394849 F8WEM9 126 aa10.62□□□□□ -0.71
UPK3B-203ENST00000394849 H0YGX0 51 aa10.62□□□□□ -0.71
UPK3B-203ENST00000394849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.62□□□□□ -0.71
UPK3B-203ENST00000394849 COX6B2Q6YFQ2 88 aa10.61□□□□□ -0.71
UPK3B-203ENST00000394849 KRTAP9-7A8MTY7 169 aa10.6□□□□□ -0.71
UPK3B-203ENST00000394849 K7ERJ3 54 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 SMIM6P0DI80 62 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 CD164Q04900 197 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 PPDPFLQ8WWR9 84 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.55□□□□□ -0.72
UPK3B-203ENST00000394849 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
UPK3B-203ENST00000394849 TRIAP1O43715 76 aa10.54□□□□□ -0.72
UPK3B-203ENST00000394849 PSMB2P49721 201 aa10.54□□□□□ -0.72
UPK3B-203ENST00000394849 FAM218AQ96MZ4 157 aa10.54□□□□□ -0.72
UPK3B-203ENST00000394849 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
UPK3B-203ENST00000394849 OCIAD2Q56VL3 154 aa10.53□□□□□ -0.72
UPK3B-203ENST00000394849 A0A1B0GX51 115 aa10.52□□□□□ -0.73
UPK3B-203ENST00000394849 FLGP20930 4061 aaPredicted RBP10.52□□□□□ -0.73
UPK3B-203ENST00000394849 COX6CP09669 75 aa10.5□□□□□ -0.73
UPK3B-203ENST00000394849 Q6JHZ5 121 aa10.5□□□□□ -0.73
UPK3B-203ENST00000394849 GHRHP01286 108 aa10.49□□□□□ -0.73
UPK3B-203ENST00000394849 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
UPK3B-203ENST00000394849 CLEC2BQ92478 149 aa10.48□□□□□ -0.73
UPK3B-203ENST00000394849 DNAL4O96015 105 aa10.46□□□□□ -0.73
UPK3B-203ENST00000394849 Q5XG85 94 aa10.46□□□□□ -0.73
UPK3B-203ENST00000394849 M0R143 59 aa10.45□□□□□ -0.74
UPK3B-203ENST00000394849 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
UPK3B-203ENST00000394849 FABP2P12104 132 aa10.44□□□□□ -0.74
UPK3B-203ENST00000394849 LOC105371267A0A1B0GV96 52 aa10.43□□□□□ -0.74
UPK3B-203ENST00000394849 TSTD3H0UI37 97 aa10.43□□□□□ -0.74
UPK3B-203ENST00000394849 H3BUT2 72 aa10.43□□□□□ -0.74
UPK3B-203ENST00000394849 NDUFV3P56181 108 aaKnown RBP10.43□□□□□ -0.74
UPK3B-203ENST00000394849 TCL1BO95988 128 aa10.42□□□□□ -0.74
UPK3B-203ENST00000394849 SCGB1C2P0DMR2 95 aa10.42□□□□□ -0.74
UPK3B-203ENST00000394849 ORMDL1Q9P0S3 153 aa10.4□□□□□ -0.74
UPK3B-203ENST00000394849 C1orf195Q5TG92 126 aa10.39□□□□□ -0.75
UPK3B-203ENST00000394849 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
UPK3B-203ENST00000394849 H3BMG7 143 aa10.37□□□□□ -0.75
UPK3B-203ENST00000394849 H3BQ85 93 aa10.37□□□□□ -0.75
UPK3B-203ENST00000394849 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
UPK3B-203ENST00000394849 TRACP01848 142 aa10.33□□□□□ -0.76
UPK3B-203ENST00000394849 LST1O00453 97 aa10.32□□□□□ -0.76
UPK3B-203ENST00000394849 BATFQ16520 125 aa10.31□□□□□ -0.76
UPK3B-203ENST00000394849 A0A1B0GV72 72 aa10.3□□□□□ -0.76
UPK3B-203ENST00000394849 Q6Q795 121 aa10.3□□□□□ -0.76
UPK3B-203ENST00000394849 TEN1Q86WV5 123 aa10.3□□□□□ -0.76
UPK3B-203ENST00000394849 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
UPK3B-203ENST00000394849 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
UPK3B-203ENST00000394849 SSPOA2VEC9 5147 aa10.27□□□□□ -0.77
UPK3B-203ENST00000394849 USH2AO75445 5202 aa10.26□□□□□ -0.77
UPK3B-203ENST00000394849 UBE2V1Q13404 147 aa10.26□□□□□ -0.77
UPK3B-203ENST00000394849 ANKRD29Q8N6D5 301 aa10.26□□□□□ -0.77
UPK3B-203ENST00000394849 A0A087WSZ3 146 aa10.24□□□□□ -0.77
UPK3B-203ENST00000394849 ATXN8Q156A1 80 aa10.24□□□□□ -0.77
UPK3B-203ENST00000394849 ATP11AUNQ6ZP68 121 aa10.24□□□□□ -0.77
UPK3B-203ENST00000394849 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
UPK3B-203ENST00000394849 KRTAP9-8Q9BYQ0 159 aa10.23□□□□□ -0.77
UPK3B-203ENST00000394849 A0A1W2PNM2 257 aa10.21□□□□□ -0.77
UPK3B-203ENST00000394849 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.77
UPK3B-203ENST00000394849 Q75L30 129 aa10.19□□□□□ -0.78
UPK3B-203ENST00000394849 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
UPK3B-203ENST00000394849 TRBV7-4A0A0J9YYF1 115 aa10.17□□□□□ -0.78
UPK3B-203ENST00000394849 RBM3P98179 157 aaKnown RBP10.17□□□□□ -0.78
UPK3B-203ENST00000394849 CCKP06307 115 aa10.16□□□□□ -0.78
UPK3B-203ENST00000394849 DSCR8Q96T75 97 aa10.16□□□□□ -0.78
UPK3B-203ENST00000394849 TRBV20-1A0A075B6N2 111 aa10.14□□□□□ -0.79
UPK3B-203ENST00000394849 VPS25Q9BRG1 176 aa10.14□□□□□ -0.79
UPK3B-203ENST00000394849 C9orf118A6NHY6 69 aa10.12□□□□□ -0.79
UPK3B-203ENST00000394849 TAX1BP3O14907 124 aa10.1□□□□□ -0.79
UPK3B-203ENST00000394849 OBSCN-AS1Q96MR7 158 aa10.1□□□□□ -0.79
UPK3B-203ENST00000394849 C9JAW5 83 aa10.09□□□□□ -0.79
UPK3B-203ENST00000394849 Q96NJ1 140 aa10.09□□□□□ -0.79
UPK3B-203ENST00000394849 SIGMAR1Q99720 223 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms