RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 C1orf64Q8NEQ6 169 aa6.33□□□□□ -1.4
UBE2D3-208ENST00000394803 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
UBE2D3-208ENST00000394803 PRLHP81277 87 aa6.31□□□□□ -1.4
UBE2D3-208ENST00000394803 MDFIQ99750 246 aa6.31□□□□□ -1.4
UBE2D3-208ENST00000394803 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
UBE2D3-208ENST00000394803 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
UBE2D3-208ENST00000394803 PKD1L1Q8TDX9 2849 aa6.31□□□□□ -1.4
UBE2D3-208ENST00000394803 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
UBE2D3-208ENST00000394803 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
UBE2D3-208ENST00000394803 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
UBE2D3-208ENST00000394803 A8MWP4 228 aa6.3□□□□□ -1.4
UBE2D3-208ENST00000394803 PRR15Q8IV56 129 aa6.3□□□□□ -1.4
UBE2D3-208ENST00000394803 UBE2DNLQ8IWF7 75 aa6.3□□□□□ -1.4
UBE2D3-208ENST00000394803 DNHD1Q96M86 4753 aa6.3□□□□□ -1.4
UBE2D3-208ENST00000394803 ANK2Q01484 3957 aa6.29□□□□□ -1.4
UBE2D3-208ENST00000394803 A0A1W2PNN7 141 aa6.29□□□□□ -1.4
UBE2D3-208ENST00000394803 KRTAP29-1A8MX34 341 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-208ENST00000394803 H0Y9P7 68 aa6.27□□□□□ -1.4
UBE2D3-208ENST00000394803 CMYA5Q8N3K9 4069 aa6.27□□□□□ -1.41
UBE2D3-208ENST00000394803 LINC00208Q96KT6 92 aa6.27□□□□□ -1.41
UBE2D3-208ENST00000394803 RPL37AP61513 92 aaKnown RBP6.25□□□□□ -1.41
UBE2D3-208ENST00000394803 DEFB116Q30KQ4 102 aa6.25□□□□□ -1.41
UBE2D3-208ENST00000394803 LINC00472Q9H8W2 130 aa6.25□□□□□ -1.41
UBE2D3-208ENST00000394803 K7EIL1 84 aa6.25□□□□□ -1.41
UBE2D3-208ENST00000394803 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-208ENST00000394803 PHF5AQ7RTV0 110 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-208ENST00000394803 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
UBE2D3-208ENST00000394803 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
UBE2D3-208ENST00000394803 TP53AIP1Q9HCN2 124 aa6.23□□□□□ -1.41
UBE2D3-208ENST00000394803 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
UBE2D3-208ENST00000394803 DNAH1Q9P2D7 4330 aa6.22□□□□□ -1.41
UBE2D3-208ENST00000394803 MOBPQ13875 183 aa6.22□□□□□ -1.41
UBE2D3-208ENST00000394803 LIMD2Q9BT23 127 aa6.22□□□□□ -1.41
UBE2D3-208ENST00000394803 KRTAP1-5Q9BYS1 174 aa6.22□□□□□ -1.41
UBE2D3-208ENST00000394803 APLNQ9ULZ1 77 aa6.21□□□□□ -1.42
UBE2D3-208ENST00000394803 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
UBE2D3-208ENST00000394803 TENM3Q9P273 2699 aa6.21□□□□□ -1.42
UBE2D3-208ENST00000394803 LRCOL1A6NCL2 159 aa6.2□□□□□ -1.42
UBE2D3-208ENST00000394803 PRR4Q16378 134 aa6.2□□□□□ -1.42
UBE2D3-208ENST00000394803 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
UBE2D3-208ENST00000394803 PRB2P02812 416 aaPredicted RBP6.19□□□□□ -1.42
UBE2D3-208ENST00000394803 NOTCH1P46531 2555 aa6.19□□□□□ -1.42
UBE2D3-208ENST00000394803 MMP24-AS1A0A0U1RRL7 71 aa6.18□□□□□ -1.42
UBE2D3-208ENST00000394803 CHTF8P0CG12 524 aa6.18□□□□□ -1.42
UBE2D3-208ENST00000394803 KRTAP13-1Q8IUC0 172 aa6.18□□□□□ -1.42
UBE2D3-208ENST00000394803 MGAM2Q2M2H8 2515 aa6.17□□□□□ -1.42
UBE2D3-208ENST00000394803 PSPHP1O15172 72 aa6.17□□□□□ -1.42
UBE2D3-208ENST00000394803 NBEAL1Q6ZS30 2694 aa6.16□□□□□ -1.42
UBE2D3-208ENST00000394803 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
UBE2D3-208ENST00000394803 NBDYA0A0U1RRE5 68 aa6.16□□□□□ -1.42
UBE2D3-208ENST00000394803 CDK2AP2O75956 126 aa6.16□□□□□ -1.42
UBE2D3-208ENST00000394803 NUPR2A6NF83 97 aa6.15□□□□□ -1.42
UBE2D3-208ENST00000394803 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.42
UBE2D3-208ENST00000394803 LINC00483Q53H64 154 aa6.15□□□□□ -1.43
UBE2D3-208ENST00000394803 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
UBE2D3-208ENST00000394803 A8MUN3 132 aa6.13□□□□□ -1.43
UBE2D3-208ENST00000394803 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
UBE2D3-208ENST00000394803 SPACA4Q8TDM5 124 aa6.13□□□□□ -1.43
UBE2D3-208ENST00000394803 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
UBE2D3-208ENST00000394803 Q6ZR54 194 aa6.12□□□□□ -1.43
UBE2D3-208ENST00000394803 IGLV9-49A0A0B4J1Y8 123 aa6.11□□□□□ -1.43
UBE2D3-208ENST00000394803 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
UBE2D3-208ENST00000394803 Q5VV11 94 aa6.11□□□□□ -1.43
UBE2D3-208ENST00000394803 COA5Q86WW8 74 aa6.11□□□□□ -1.43
UBE2D3-208ENST00000394803 Q96NJ1 140 aa6.11□□□□□ -1.43
UBE2D3-208ENST00000394803 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
UBE2D3-208ENST00000394803 CHKB-CPT1BH3BT56 60 aa6.09□□□□□ -1.43
UBE2D3-208ENST00000394803 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
UBE2D3-208ENST00000394803 PRR15LQ9BU68 103 aa6.09□□□□□ -1.43
UBE2D3-208ENST00000394803 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
UBE2D3-208ENST00000394803 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.44
UBE2D3-208ENST00000394803 Q75L30 129 aa6.09□□□□□ -1.44
UBE2D3-208ENST00000394803 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.44
UBE2D3-208ENST00000394803 NDUFS5O43920 106 aa6.07□□□□□ -1.44
UBE2D3-208ENST00000394803 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
UBE2D3-208ENST00000394803 MEGF8Q7Z7M0 2845 aa6.06□□□□□ -1.44
UBE2D3-208ENST00000394803 IGLV5-52A0A0A0MRZ9 124 aa6.06□□□□□ -1.44
UBE2D3-208ENST00000394803 WWC2-AS2Q96NR7 200 aa6.06□□□□□ -1.44
UBE2D3-208ENST00000394803 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
UBE2D3-208ENST00000394803 A0A087WTM6 91 aa6.05□□□□□ -1.44
UBE2D3-208ENST00000394803 PANO1I0J062 215 aa6.05□□□□□ -1.44
UBE2D3-208ENST00000394803 ZNF861PO60384 105 aa6.05□□□□□ -1.44
UBE2D3-208ENST00000394803 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
UBE2D3-208ENST00000394803 KRTAP21-3Q3LHN1 58 aa6.04□□□□□ -1.44
UBE2D3-208ENST00000394803 CD164Q04900 197 aa6.03□□□□□ -1.44
UBE2D3-208ENST00000394803 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
UBE2D3-208ENST00000394803 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
UBE2D3-208ENST00000394803 A6NED7 52 aa6.02□□□□□ -1.45
UBE2D3-208ENST00000394803 RTL8CO15255 209 aa6.02□□□□□ -1.45
UBE2D3-208ENST00000394803 ATP11AUNQ6ZP68 121 aa6.02□□□□□ -1.45
UBE2D3-208ENST00000394803 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
UBE2D3-208ENST00000394803 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
UBE2D3-208ENST00000394803 COL7A1Q02388 2944 aa6.01□□□□□ -1.45
UBE2D3-208ENST00000394803 PRKDCP78527 4128 aaKnown RBP6□□□□□ -1.45
UBE2D3-208ENST00000394803 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
UBE2D3-208ENST00000394803 DYNC2H1Q8NCM8 4307 aaKnown RBP5.99□□□□□ -1.45
UBE2D3-208ENST00000394803 SEC61GP60059 68 aa5.98□□□□□ -1.45
UBE2D3-208ENST00000394803 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
UBE2D3-208ENST00000394803 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
UBE2D3-208ENST00000394803 SSBP3-AS1Q7Z2R9 100 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms