RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 C19orf73Q9NVV2 129 aa7.85□□□□□ -1.15
SLC28A1-203ENST00000394573 FLNCQ14315 2725 aa7.85□□□□□ -1.15
SLC28A1-203ENST00000394573 PKD1L1Q8TDX9 2849 aa7.85□□□□□ -1.15
SLC28A1-203ENST00000394573 C1orf134Q5TEV5 83 aa7.84□□□□□ -1.15
SLC28A1-203ENST00000394573 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
SLC28A1-203ENST00000394573 C15orf56Q8N910 161 aa7.82□□□□□ -1.16
SLC28A1-203ENST00000394573 FBN1P35555 2871 aaKnown RBP7.82□□□□□ -1.16
SLC28A1-203ENST00000394573 TENM2Q9NT68 2774 aa7.82□□□□□ -1.16
SLC28A1-203ENST00000394573 Q6YL49 198 aa7.82□□□□□ -1.16
SLC28A1-203ENST00000394573 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
SLC28A1-203ENST00000394573 ABCA12Q86UK0 2595 aa7.81□□□□□ -1.16
SLC28A1-203ENST00000394573 KRTAP4-16G5E9R7 235 aaPredicted RBP7.8□□□□□ -1.16
SLC28A1-203ENST00000394573 X6R8D5 127 aa7.8□□□□□ -1.16
SLC28A1-203ENST00000394573 CACNA1AO00555 2505 aa7.8□□□□□ -1.16
SLC28A1-203ENST00000394573 PDZD2O15018 2839 aa7.79□□□□□ -1.16
SLC28A1-203ENST00000394573 A0A096LNI7 61 aa7.79□□□□□ -1.16
SLC28A1-203ENST00000394573 A8MWP4 228 aa7.78□□□□□ -1.16
SLC28A1-203ENST00000394573 LELP1Q5T871 98 aa7.78□□□□□ -1.16
SLC28A1-203ENST00000394573 DOPEY1Q5JWR5 2465 aa7.78□□□□□ -1.16
SLC28A1-203ENST00000394573 IGKV2-24A0A0C4DH68 120 aa7.77□□□□□ -1.16
SLC28A1-203ENST00000394573 VWFP04275 2813 aa7.77□□□□□ -1.17
SLC28A1-203ENST00000394573 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
SLC28A1-203ENST00000394573 DEFB135Q30KP9 77 aa7.76□□□□□ -1.17
SLC28A1-203ENST00000394573 PRLHP81277 87 aa7.75□□□□□ -1.17
SLC28A1-203ENST00000394573 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
SLC28A1-203ENST00000394573 HIVEP1P15822 2718 aa7.72□□□□□ -1.17
SLC28A1-203ENST00000394573 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
SLC28A1-203ENST00000394573 KRTAP7-1Q8IUC3 87 aa7.72□□□□□ -1.17
SLC28A1-203ENST00000394573 A0A1B0GU69 56 aa7.71□□□□□ -1.18
SLC28A1-203ENST00000394573 K7EIL1 84 aa7.71□□□□□ -1.18
SLC28A1-203ENST00000394573 SPRR1AP35321 89 aa7.71□□□□□ -1.18
SLC28A1-203ENST00000394573 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.18
SLC28A1-203ENST00000394573 FAM208BQ5VWN6 2430 aa7.71□□□□□ -1.18
SLC28A1-203ENST00000394573 LINC00472Q9H8W2 130 aa7.71□□□□□ -1.18
SLC28A1-203ENST00000394573 COL7A1Q02388 2944 aa7.7□□□□□ -1.18
SLC28A1-203ENST00000394573 CMC4P56277 68 aaPredicted RBP7.7□□□□□ -1.18
SLC28A1-203ENST00000394573 MYO18BQ8IUG5 2567 aa7.69□□□□□ -1.18
SLC28A1-203ENST00000394573 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
SLC28A1-203ENST00000394573 IGSF10Q6WRI0 2623 aa7.69□□□□□ -1.18
SLC28A1-203ENST00000394573 USP24Q9UPU5 2620 aa7.69□□□□□ -1.18
SLC28A1-203ENST00000394573 ASB16-AS1Q495Z4 193 aa7.68□□□□□ -1.18
SLC28A1-203ENST00000394573 ITPR3Q14573 2671 aa7.68□□□□□ -1.18
SLC28A1-203ENST00000394573 IGLV8-61A0A075B6I0 122 aa7.68□□□□□ -1.18
SLC28A1-203ENST00000394573 HELZ2Q9BYK8 2649 aaKnown RBP7.67□□□□□ -1.18
SLC28A1-203ENST00000394573 HECTD1Q9ULT8 2610 aa7.67□□□□□ -1.18
SLC28A1-203ENST00000394573 ROMO1P60602 79 aa7.67□□□□□ -1.18
SLC28A1-203ENST00000394573 REG3GQ6UW15 175 aa7.67□□□□□ -1.18
SLC28A1-203ENST00000394573 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
SLC28A1-203ENST00000394573 DEFB131BA0A096LNP1 70 aa7.63□□□□□ -1.19
SLC28A1-203ENST00000394573 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
SLC28A1-203ENST00000394573 IGHV6-1A0A0B4J1U7 121 aa7.62□□□□□ -1.19
SLC28A1-203ENST00000394573 ZNF861PO60384 105 aa7.61□□□□□ -1.19
SLC28A1-203ENST00000394573 ACANP16112 2415 aa7.61□□□□□ -1.19
SLC28A1-203ENST00000394573 UQCR11O14957 56 aa7.61□□□□□ -1.19
SLC28A1-203ENST00000394573 TP53AIP1Q9HCN2 124 aa7.61□□□□□ -1.19
SLC28A1-203ENST00000394573 TEP1Q99973 2627 aaKnown RBP7.6□□□□□ -1.19
SLC28A1-203ENST00000394573 ANK3Q12955 4377 aaKnown RBP7.6□□□□□ -1.19
SLC28A1-203ENST00000394573 CASC10Q5T4H9 136 aa7.59□□□□□ -1.19
SLC28A1-203ENST00000394573 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
SLC28A1-203ENST00000394573 ACYP2P14621 99 aa7.57□□□□□ -1.2
SLC28A1-203ENST00000394573 A0A087X002 238 aa7.57□□□□□ -1.2
SLC28A1-203ENST00000394573 NOTCH2NLQ7Z3S9 236 aa7.57□□□□□ -1.2
SLC28A1-203ENST00000394573 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
SLC28A1-203ENST00000394573 P0C880 135 aa7.55□□□□□ -1.2
SLC28A1-203ENST00000394573 SPART-AS1P0CW21 52 aa7.55□□□□□ -1.2
SLC28A1-203ENST00000394573 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
SLC28A1-203ENST00000394573 FLNAP21333 2647 aaKnown RBP7.55□□□□□ -1.2
SLC28A1-203ENST00000394573 Q5W150 140 aa7.54□□□□□ -1.2
SLC28A1-203ENST00000394573 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
SLC28A1-203ENST00000394573 INAFM1C9JVW0 142 aa7.52□□□□□ -1.21
SLC28A1-203ENST00000394573 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
SLC28A1-203ENST00000394573 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.21
SLC28A1-203ENST00000394573 NOTCH2Q04721 2471 aa7.51□□□□□ -1.21
SLC28A1-203ENST00000394573 Q96NJ1 140 aa7.5□□□□□ -1.21
SLC28A1-203ENST00000394573 A0A0A0MQY5 61 aa7.5□□□□□ -1.21
SLC28A1-203ENST00000394573 TLX1NBP0CAT3 122 aa7.5□□□□□ -1.21
SLC28A1-203ENST00000394573 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
SLC28A1-203ENST00000394573 DNAH10OSP0CZ25 163 aa7.49□□□□□ -1.21
SLC28A1-203ENST00000394573 IGLV9-49A0A0B4J1Y8 123 aa7.48□□□□□ -1.21
SLC28A1-203ENST00000394573 KRTAP11-1Q8IUC1 163 aa7.47□□□□□ -1.21
SLC28A1-203ENST00000394573 DMAC1Q96GE9 116 aa7.46□□□□□ -1.21
SLC28A1-203ENST00000394573 TENM3Q9P273 2699 aa7.46□□□□□ -1.22
SLC28A1-203ENST00000394573 A8MUU9 505 aa7.46□□□□□ -1.22
SLC28A1-203ENST00000394573 A0A1B0GVX0 72 aa7.45□□□□□ -1.22
SLC28A1-203ENST00000394573 IGLV5-52A0A0A0MRZ9 124 aa7.45□□□□□ -1.22
SLC28A1-203ENST00000394573 CDK2AP2O75956 126 aa7.44□□□□□ -1.22
SLC28A1-203ENST00000394573 TENM1Q9UKZ4 2725 aa7.43□□□□□ -1.22
SLC28A1-203ENST00000394573 SPINK6Q6UWN8 80 aa7.4□□□□□ -1.22
SLC28A1-203ENST00000394573 DNAH10Q8IVF4 4471 aa7.4□□□□□ -1.22
SLC28A1-203ENST00000394573 TENM4Q6N022 2769 aa7.4□□□□□ -1.22
SLC28A1-203ENST00000394573 NOTCH1P46531 2555 aa7.39□□□□□ -1.23
SLC28A1-203ENST00000394573 KRTAP10-9P60411 292 aa7.39□□□□□ -1.23
SLC28A1-203ENST00000394573 LINC01556Q5JQF7 62 aa7.39□□□□□ -1.23
SLC28A1-203ENST00000394573 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
SLC28A1-203ENST00000394573 SPINK1P00995 79 aa7.37□□□□□ -1.23
SLC28A1-203ENST00000394573 CHTF8P0CG12 524 aa7.37□□□□□ -1.23
SLC28A1-203ENST00000394573 KMT2BQ9UMN6 2715 aaPredicted RBP7.36□□□□□ -1.23
SLC28A1-203ENST00000394573 ATRQ13535 2644 aa7.36□□□□□ -1.23
SLC28A1-203ENST00000394573 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
SLC28A1-203ENST00000394573 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms