RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 GNG4P50150 75 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ATP5EP56381 51 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 TCTAP57738 103 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 DEFB131AP59861 70 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ARPC4P59998 168 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CKS1BP61024 79 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 MAGOHP61326 146 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 COPZ1P61923 177 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 GNG11P61952 73 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 NCS1P62166 190 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PPP3R1P63098 170 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 GNGT1P63211 74 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 MRPS10P82664 201 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SARNPP82979 210 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 TFF3Q07654 80 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ESPL1Q14674 2120 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SMCO1Q147U7 214 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PLGLAQ15195 96 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SPA17Q15506 151 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 HMGN3Q15651 99 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PMCHL1Q16048 86 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 WHAMMP3Q1A5X7 153 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SMIM21Q3B7S5 101 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SCGB2B2Q4G0G5 96 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PYY3Q5JQD4 70 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC122Q5T0U0 273 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 NCMAPQ5T1S8 102 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 BVES-AS1Q5T3Y7 98 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 MINOS1Q5TGZ0 78 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 LYRM7Q5U5X0 104 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ATP5EP2Q5VTU8 51 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 RPL13AP3Q6NVV1 102 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ENHOQ6UWT2 76 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 HEPN1Q6WQI6 88 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 LINC00643Q86TS7 51 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 MUSTN1Q8IVN3 82 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CTAGE3PQ8IX95 158 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 FAM9CQ8IZT9 166 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 C8orf59Q8N0T1 100 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 FAM24BQ8N5W8 94 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SERP2Q8N6R1 65 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 TMEM35BQ8NCS4 154 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 DEFB124Q8NES8 71 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 TSTD1Q8NFU3 115 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CDC26Q8NHZ8 85 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 LINC00308Q8TCZ7 52 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SKA2Q8WVK7 121 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 DYDC1Q8WWB3 177 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 C1orf54Q8WWF1 131 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 LZICQ8WZA0 190 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ANP32BQ92688 251 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SPTSSAQ969W0 71 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CHMP6Q96FZ7 201 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PPP3R2Q96LZ3 170 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PFDN5Q99471 154 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 C12orf57Q99622 126 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PMCHL2Q9BQD1 86 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PSMG3Q9BT73 122 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PDCD10Q9BUL8 212 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC32Q9BV29 185 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CENPHQ9H3R5 247 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SPANXA1Q9NS26 97 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 FAIMQ9NVQ4 179 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 GID8Q9NWU2 228 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CHMP5Q9NZZ3 219 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC167Q9P0B6 97 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 GSKIPQ9P0R6 139 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 UQCR10Q9UDW1 63 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ATPIF1Q9UII2 106 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PAIP2BQ9ULR5 123 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ARL2BPQ9Y2Y0 163 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 HILPDAQ9Y5L2 63 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 IER3IP1Q9Y5U9 82 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ABCC3O15438 1527 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 TRPM2O94759 1503 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 TOP2AP11388 1531 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CPS1P31327 1500 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ABCC1P33527 1531 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ERICH3Q5RHP9 1530 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 EFCAB6Q5THR3 1501 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 BCORQ6W2J9 1755 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 KDM3BQ7LBC6 1761 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 CITO14578 2027 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 DSCAMO60469 2012 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 MROH2AA6NES4 1674 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ALS2Q96Q42 1657 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 RAI1Q7Z5J4 1906 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 BAZ2AQ9UIF9 1905 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 DICER1Q9UPY3 1922 aaKnown RBP-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 PLXND1Q9Y4D7 1925 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 RP1P56715 2156 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ALPK2Q86TB3 2170 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ARHGAP32A7KAX9 2087 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ANKRD12Q6UB98 2062 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 DSCAML1Q8TD84 2053 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 ATG2BQ96BY7 2078 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 MYOFQ9NZM1 2061 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 KIF1BO60333 1816 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SIP14410 1827 aa-0.15□□□□□ -2.43
TRAJ54-201ENST00000390484 SCN4AP35499 1836 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms