RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
VLDLR-202ENST00000382099 IGKV2D-24A0A075B6R9 120 aa9.7□□□□□ -0.86
VLDLR-202ENST00000382099 GVQW2A0A096LPI5 108 aaPredicted RBP9.7□□□□□ -0.86
VLDLR-202ENST00000382099 A0A087WSZ3 146 aa9.68□□□□□ -0.86
VLDLR-202ENST00000382099 A0A1B0GW54 56 aa9.68□□□□□ -0.86
VLDLR-202ENST00000382099 COL6A5A8TX70 2615 aa9.67□□□□□ -0.86
VLDLR-202ENST00000382099 IGLV1-51P01701 117 aa9.67□□□□□ -0.86
VLDLR-202ENST00000382099 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
VLDLR-202ENST00000382099 SPRR4Q96PI1 79 aa9.66□□□□□ -0.86
VLDLR-202ENST00000382099 NSD1Q96L73 2696 aaPredicted RBP9.66□□□□□ -0.86
VLDLR-202ENST00000382099 BAHCC1Q9P281 2608 aa9.65□□□□□ -0.86
VLDLR-202ENST00000382099 EGFEM1PQ0D2K5 195 aa9.65□□□□□ -0.86
VLDLR-202ENST00000382099 DHRS4-AS1Q9P1J3 65 aa9.65□□□□□ -0.87
VLDLR-202ENST00000382099 LINC01558Q9Y6Z2 57 aa9.65□□□□□ -0.87
VLDLR-202ENST00000382099 Q8NAQ8 132 aa9.64□□□□□ -0.87
VLDLR-202ENST00000382099 LINC00476Q8WZB0 136 aa9.63□□□□□ -0.87
VLDLR-202ENST00000382099 CMC4P56277 68 aaPredicted RBP9.62□□□□□ -0.87
VLDLR-202ENST00000382099 H3BPC8 53 aa9.62□□□□□ -0.87
VLDLR-202ENST00000382099 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
VLDLR-202ENST00000382099 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
VLDLR-202ENST00000382099 Q6ZRX8 168 aa9.61□□□□□ -0.87
VLDLR-202ENST00000382099 C9orf163Q8N9P6 203 aa9.61□□□□□ -0.87
VLDLR-202ENST00000382099 ANK3Q12955 4377 aaKnown RBP9.61□□□□□ -0.87
VLDLR-202ENST00000382099 TNP2Q05952 138 aa9.6□□□□□ -0.87
VLDLR-202ENST00000382099 IGLV7-46A0A075B6I9 117 aa9.59□□□□□ -0.87
VLDLR-202ENST00000382099 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
VLDLR-202ENST00000382099 H0Y9J4 135 aa9.58□□□□□ -0.88
VLDLR-202ENST00000382099 LELP1Q5T871 98 aa9.57□□□□□ -0.88
VLDLR-202ENST00000382099 C19orf73Q9NVV2 129 aa9.57□□□□□ -0.88
VLDLR-202ENST00000382099 IGFL1Q6UW32 110 aa9.55□□□□□ -0.88
VLDLR-202ENST00000382099 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
VLDLR-202ENST00000382099 KRTAP29-1A8MX34 341 aaPredicted RBP9.54□□□□□ -0.88
VLDLR-202ENST00000382099 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
VLDLR-202ENST00000382099 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
VLDLR-202ENST00000382099 RETNLBQ9BQ08 111 aa9.54□□□□□ -0.88
VLDLR-202ENST00000382099 FAM168BA1KXE4 195 aa9.53□□□□□ -0.88
VLDLR-202ENST00000382099 X6R8D5 127 aa9.53□□□□□ -0.88
VLDLR-202ENST00000382099 CNBPP62633 177 aaKnown RBP9.52□□□□□ -0.89
VLDLR-202ENST00000382099 CSMD3Q7Z407 3707 aa9.5□□□□□ -0.89
VLDLR-202ENST00000382099 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
VLDLR-202ENST00000382099 A0A096LNI7 61 aa9.48□□□□□ -0.89
VLDLR-202ENST00000382099 HRES1P13985 223 aa9.48□□□□□ -0.89
VLDLR-202ENST00000382099 C15orf56Q8N910 161 aa9.48□□□□□ -0.89
VLDLR-202ENST00000382099 INAFM1C9JVW0 142 aa9.47□□□□□ -0.89
VLDLR-202ENST00000382099 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
VLDLR-202ENST00000382099 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
VLDLR-202ENST00000382099 KRTAP1-1Q07627 177 aa9.45□□□□□ -0.9
VLDLR-202ENST00000382099 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
VLDLR-202ENST00000382099 IGLV5-37A0A075B6J1 123 aa9.44□□□□□ -0.9
VLDLR-202ENST00000382099 A8MWP4 228 aa9.43□□□□□ -0.9
VLDLR-202ENST00000382099 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
VLDLR-202ENST00000382099 ZNF706Q9Y5V0 76 aaPredicted RBP9.42□□□□□ -0.9
VLDLR-202ENST00000382099 PRLHP81277 87 aa9.41□□□□□ -0.9
VLDLR-202ENST00000382099 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
VLDLR-202ENST00000382099 KRTAP4-16G5E9R7 235 aaPredicted RBP9.4□□□□□ -0.91
VLDLR-202ENST00000382099 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
VLDLR-202ENST00000382099 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
VLDLR-202ENST00000382099 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
VLDLR-202ENST00000382099 MMP24-AS1A0A0U1RRL7 71 aa9.35□□□□□ -0.91
VLDLR-202ENST00000382099 SPRR1AP35321 89 aa9.34□□□□□ -0.91
VLDLR-202ENST00000382099 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
VLDLR-202ENST00000382099 J3QKU1 62 aa9.33□□□□□ -0.92
VLDLR-202ENST00000382099 KRTAP26-1Q6PEX3 210 aa9.33□□□□□ -0.92
VLDLR-202ENST00000382099 Q6ZR54 194 aa9.33□□□□□ -0.92
VLDLR-202ENST00000382099 A0A1B0GU69 56 aa9.32□□□□□ -0.92
VLDLR-202ENST00000382099 RTL8CO15255 209 aa9.31□□□□□ -0.92
VLDLR-202ENST00000382099 C1orf134Q5TEV5 83 aa9.3□□□□□ -0.92
VLDLR-202ENST00000382099 ANK2Q01484 3957 aa9.3□□□□□ -0.92
VLDLR-202ENST00000382099 STAB2Q8WWQ8 2551 aa9.3□□□□□ -0.92
VLDLR-202ENST00000382099 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
VLDLR-202ENST00000382099 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
VLDLR-202ENST00000382099 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.92
VLDLR-202ENST00000382099 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
VLDLR-202ENST00000382099 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
VLDLR-202ENST00000382099 SRRM2Q9UQ35 2752 aaKnown RBP9.22□□□□□ -0.93
VLDLR-202ENST00000382099 DEFB131BA0A096LNP1 70 aa9.22□□□□□ -0.93
VLDLR-202ENST00000382099 IGLV8-61A0A075B6I0 122 aa9.22□□□□□ -0.93
VLDLR-202ENST00000382099 K7EIL1 84 aa9.21□□□□□ -0.93
VLDLR-202ENST00000382099 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.93
VLDLR-202ENST00000382099 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.93
VLDLR-202ENST00000382099 CDK2AP2O75956 126 aa9.21□□□□□ -0.94
VLDLR-202ENST00000382099 ACYP2P14621 99 aa9.21□□□□□ -0.94
VLDLR-202ENST00000382099 UQCR11O14957 56 aa9.2□□□□□ -0.94
VLDLR-202ENST00000382099 C8orf17Q9NRJ1 99 aa9.2□□□□□ -0.94
VLDLR-202ENST00000382099 SPATA8Q6RVD6 105 aa9.19□□□□□ -0.94
VLDLR-202ENST00000382099 CASC10Q5T4H9 136 aa9.18□□□□□ -0.94
VLDLR-202ENST00000382099 COL7A1Q02388 2944 aa9.17□□□□□ -0.94
VLDLR-202ENST00000382099 TLX1NBP0CAT3 122 aa9.17□□□□□ -0.94
VLDLR-202ENST00000382099 IGLV9-49A0A0B4J1Y8 123 aa9.14□□□□□ -0.95
VLDLR-202ENST00000382099 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
VLDLR-202ENST00000382099 LYSTQ99698 3801 aa9.09□□□□□ -0.95
VLDLR-202ENST00000382099 LINC01556Q5JQF7 62 aa9.09□□□□□ -0.95
VLDLR-202ENST00000382099 KRTAP10-11P60412 298 aa9.08□□□□□ -0.96
VLDLR-202ENST00000382099 ROMO1P60602 79 aa9.07□□□□□ -0.96
VLDLR-202ENST00000382099 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
VLDLR-202ENST00000382099 A0A087X002 238 aa9.06□□□□□ -0.96
VLDLR-202ENST00000382099 NOTCH2NLQ7Z3S9 236 aa9.06□□□□□ -0.96
VLDLR-202ENST00000382099 A0A1B0GVX0 72 aa9.06□□□□□ -0.96
VLDLR-202ENST00000382099 SPINK6Q6UWN8 80 aa9.05□□□□□ -0.96
VLDLR-202ENST00000382099 Q5W150 140 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms