RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CNBPP62633 177 aaKnown RBP12.02□□□□□ -0.48
SMARCD1-201ENST00000381513 LINC01558Q9Y6Z2 57 aa12.02□□□□□ -0.49
SMARCD1-201ENST00000381513 ITPR3Q14573 2671 aa12.01□□□□□ -0.49
SMARCD1-201ENST00000381513 LINC00313P59037 77 aa12.01□□□□□ -0.49
SMARCD1-201ENST00000381513 SPRR1AP35321 89 aa11.99□□□□□ -0.49
SMARCD1-201ENST00000381513 BAHCC1Q9P281 2608 aa11.99□□□□□ -0.49
SMARCD1-201ENST00000381513 H3BS24 57 aa11.99□□□□□ -0.49
SMARCD1-201ENST00000381513 DEFB113Q30KQ7 82 aa11.98□□□□□ -0.49
SMARCD1-201ENST00000381513 PRLHP81277 87 aa11.98□□□□□ -0.49
SMARCD1-201ENST00000381513 A0A096LNI7 61 aa11.97□□□□□ -0.49
SMARCD1-201ENST00000381513 REG3GQ6UW15 175 aa11.96□□□□□ -0.49
SMARCD1-201ENST00000381513 A8MWP4 228 aa11.95□□□□□ -0.5
SMARCD1-201ENST00000381513 ADM2Q7Z4H4 148 aa11.93□□□□□ -0.5
SMARCD1-201ENST00000381513 ZNF469Q96JG9 3925 aaPredicted RBP11.92□□□□□ -0.5
SMARCD1-201ENST00000381513 VWFP04275 2813 aa11.91□□□□□ -0.5
SMARCD1-201ENST00000381513 MDFIQ99750 246 aa11.9□□□□□ -0.5
SMARCD1-201ENST00000381513 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
SMARCD1-201ENST00000381513 PLA2G2DQ9UNK4 145 aa11.88□□□□□ -0.51
SMARCD1-201ENST00000381513 IGLV5-37A0A075B6J1 123 aa11.87□□□□□ -0.51
SMARCD1-201ENST00000381513 OTOGQ6ZRI0 2925 aa11.87□□□□□ -0.51
SMARCD1-201ENST00000381513 HRES1P13985 223 aa11.86□□□□□ -0.51
SMARCD1-201ENST00000381513 LINC01554Q52M75 96 aa11.85□□□□□ -0.51
SMARCD1-201ENST00000381513 PLAC8Q9NZF1 115 aa11.85□□□□□ -0.51
SMARCD1-201ENST00000381513 PKD1L1Q8TDX9 2849 aa11.85□□□□□ -0.51
SMARCD1-201ENST00000381513 TLX1NBP0CAT3 122 aa11.84□□□□□ -0.51
SMARCD1-201ENST00000381513 HIVEP1P15822 2718 aa11.84□□□□□ -0.51
SMARCD1-201ENST00000381513 PRR26Q8N8Z3 221 aa11.84□□□□□ -0.51
SMARCD1-201ENST00000381513 NOTCH2Q04721 2471 aa11.83□□□□□ -0.52
SMARCD1-201ENST00000381513 MMP24-AS1A0A0U1RRL7 71 aa11.83□□□□□ -0.52
SMARCD1-201ENST00000381513 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
SMARCD1-201ENST00000381513 CASC10Q5T4H9 136 aa11.82□□□□□ -0.52
SMARCD1-201ENST00000381513 LINC00472Q9H8W2 130 aa11.82□□□□□ -0.52
SMARCD1-201ENST00000381513 KRTAP10-3P60369 221 aa11.81□□□□□ -0.52
SMARCD1-201ENST00000381513 LINC01556Q5JQF7 62 aa11.79□□□□□ -0.52
SMARCD1-201ENST00000381513 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
SMARCD1-201ENST00000381513 IGLV8-61A0A075B6I0 122 aa11.77□□□□□ -0.53
SMARCD1-201ENST00000381513 UBR5O95071 2799 aaPredicted RBP11.77□□□□□ -0.53
SMARCD1-201ENST00000381513 SRRM2Q9UQ35 2752 aaKnown RBP11.76□□□□□ -0.53
SMARCD1-201ENST00000381513 HELZ2Q9BYK8 2649 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-201ENST00000381513 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
SMARCD1-201ENST00000381513 TP53AIP1Q9HCN2 124 aa11.74□□□□□ -0.53
SMARCD1-201ENST00000381513 TENM4Q6N022 2769 aa11.7□□□□□ -0.54
SMARCD1-201ENST00000381513 IGHV6-1A0A0B4J1U7 121 aa11.7□□□□□ -0.54
SMARCD1-201ENST00000381513 FASNP49327 2511 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-201ENST00000381513 HECTD1Q9ULT8 2610 aa11.69□□□□□ -0.54
SMARCD1-201ENST00000381513 H3BNG1 76 aa11.68□□□□□ -0.54
SMARCD1-201ENST00000381513 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-201ENST00000381513 DEFB131BA0A096LNP1 70 aa11.67□□□□□ -0.54
SMARCD1-201ENST00000381513 PDZD2O15018 2839 aa11.66□□□□□ -0.54
SMARCD1-201ENST00000381513 C8orf17Q9NRJ1 99 aa11.65□□□□□ -0.54
SMARCD1-201ENST00000381513 ITPR2Q14571 2701 aa11.64□□□□□ -0.55
SMARCD1-201ENST00000381513 ATRQ13535 2644 aa11.64□□□□□ -0.55
SMARCD1-201ENST00000381513 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
SMARCD1-201ENST00000381513 Q6ZR54 194 aa11.63□□□□□ -0.55
SMARCD1-201ENST00000381513 IGLV9-49A0A0B4J1Y8 123 aa11.6□□□□□ -0.55
SMARCD1-201ENST00000381513 DNAH10OSP0CZ25 163 aa11.6□□□□□ -0.55
SMARCD1-201ENST00000381513 RETNLBQ9BQ08 111 aa11.6□□□□□ -0.55
SMARCD1-201ENST00000381513 A0A1B0GU69 56 aa11.59□□□□□ -0.55
SMARCD1-201ENST00000381513 K7EIL1 84 aa11.59□□□□□ -0.55
SMARCD1-201ENST00000381513 CSAG1Q6PB30 78 aa11.56□□□□□ -0.56
SMARCD1-201ENST00000381513 ACYP2P14621 99 aa11.55□□□□□ -0.56
SMARCD1-201ENST00000381513 MRPL34Q9BQ48 92 aaKnown RBP11.55□□□□□ -0.56
SMARCD1-201ENST00000381513 KRTAP1-1Q07627 177 aa11.54□□□□□ -0.56
SMARCD1-201ENST00000381513 ANK3Q12955 4377 aaKnown RBP11.53□□□□□ -0.56
SMARCD1-201ENST00000381513 TENM3Q9P273 2699 aa11.53□□□□□ -0.56
SMARCD1-201ENST00000381513 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.57
SMARCD1-201ENST00000381513 SMR3AQ99954 134 aa11.52□□□□□ -0.57
SMARCD1-201ENST00000381513 TENM1Q9UKZ4 2725 aa11.52□□□□□ -0.57
SMARCD1-201ENST00000381513 CHTF8P0CG12 524 aa11.52□□□□□ -0.57
SMARCD1-201ENST00000381513 RTL8CO15255 209 aa11.51□□□□□ -0.57
SMARCD1-201ENST00000381513 MIR22HGQ0VDD5 57 aa11.5□□□□□ -0.57
SMARCD1-201ENST00000381513 A0A1B0GVX0 72 aa11.5□□□□□ -0.57
SMARCD1-201ENST00000381513 SPRR1BP22528 89 aa11.49□□□□□ -0.57
SMARCD1-201ENST00000381513 ASB16-AS1Q495Z4 193 aa11.48□□□□□ -0.57
SMARCD1-201ENST00000381513 TENM2Q9NT68 2774 aa11.48□□□□□ -0.57
SMARCD1-201ENST00000381513 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
SMARCD1-201ENST00000381513 Q96NJ1 140 aa11.48□□□□□ -0.57
SMARCD1-201ENST00000381513 TRRAPQ9Y4A5 3859 aa11.48□□□□□ -0.57
SMARCD1-201ENST00000381513 A0A087X002 238 aa11.47□□□□□ -0.57
SMARCD1-201ENST00000381513 NOTCH2NLQ7Z3S9 236 aa11.47□□□□□ -0.57
SMARCD1-201ENST00000381513 SPATA8Q6RVD6 105 aa11.45□□□□□ -0.58
SMARCD1-201ENST00000381513 UQCR11O14957 56 aa11.44□□□□□ -0.58
SMARCD1-201ENST00000381513 SPINK6Q6UWN8 80 aa11.44□□□□□ -0.58
SMARCD1-201ENST00000381513 FLNBO75369 2602 aaKnown RBP11.43□□□□□ -0.58
SMARCD1-201ENST00000381513 CSMD3Q7Z407 3707 aa11.43□□□□□ -0.58
SMARCD1-201ENST00000381513 OXLD1Q5BKU9 147 aa11.43□□□□□ -0.58
SMARCD1-201ENST00000381513 Q5W150 140 aa11.42□□□□□ -0.58
SMARCD1-201ENST00000381513 COL7A1Q02388 2944 aa11.37□□□□□ -0.59
SMARCD1-201ENST00000381513 KMT2BQ9UMN6 2715 aaPredicted RBP11.35□□□□□ -0.59
SMARCD1-201ENST00000381513 C1orf134Q5TEV5 83 aa11.31□□□□□ -0.6
SMARCD1-201ENST00000381513 MAST4O15021 2626 aa11.31□□□□□ -0.6
SMARCD1-201ENST00000381513 DMAC1Q96GE9 116 aa11.29□□□□□ -0.6
SMARCD1-201ENST00000381513 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
SMARCD1-201ENST00000381513 COL6A5A8TX70 2615 aa11.28□□□□□ -0.6
SMARCD1-201ENST00000381513 J3QKU1 62 aa11.28□□□□□ -0.6
SMARCD1-201ENST00000381513 ANAPC11Q9NYG5 84 aa11.27□□□□□ -0.61
SMARCD1-201ENST00000381513 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
SMARCD1-201ENST00000381513 KRTAP10-11P60412 298 aa11.26□□□□□ -0.61
SMARCD1-201ENST00000381513 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-201ENST00000381513 INAFM1C9JVW0 142 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms