RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 RPS28P62857 69 aaKnown RBP11.35□□□□□ -0.59
UBL3-201ENST00000380680 IGLV5-37A0A075B6J1 123 aa11.35□□□□□ -0.59
UBL3-201ENST00000380680 IGLV5-48A0A075B6I7 105 aa11.34□□□□□ -0.59
UBL3-201ENST00000380680 A6NED7 52 aa11.34□□□□□ -0.59
UBL3-201ENST00000380680 PSPHP1O15172 72 aa11.33□□□□□ -0.6
UBL3-201ENST00000380680 CELSR1Q9NYQ6 3014 aa11.33□□□□□ -0.6
UBL3-201ENST00000380680 A8MWP4 228 aa11.32□□□□□ -0.6
UBL3-201ENST00000380680 LIMD2Q9BT23 127 aa11.31□□□□□ -0.6
UBL3-201ENST00000380680 TP53AIP1Q9HCN2 124 aa11.3□□□□□ -0.6
UBL3-201ENST00000380680 ANAPC11Q9NYG5 84 aa11.3□□□□□ -0.6
UBL3-201ENST00000380680 TRAV22A0A0B4J277 110 aa11.3□□□□□ -0.6
UBL3-201ENST00000380680 KRTAP26-1Q6PEX3 210 aa11.3□□□□□ -0.6
UBL3-201ENST00000380680 ZNF861PO60384 105 aa11.29□□□□□ -0.6
UBL3-201ENST00000380680 PRR15LQ9BU68 103 aa11.27□□□□□ -0.6
UBL3-201ENST00000380680 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.6
UBL3-201ENST00000380680 KLKP1Q107X0 134 aa11.27□□□□□ -0.61
UBL3-201ENST00000380680 TENM4Q6N022 2769 aa11.26□□□□□ -0.61
UBL3-201ENST00000380680 PRR15Q8IV56 129 aa11.26□□□□□ -0.61
UBL3-201ENST00000380680 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
UBL3-201ENST00000380680 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
UBL3-201ENST00000380680 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
UBL3-201ENST00000380680 C4orf26Q17RF5 130 aa11.23□□□□□ -0.61
UBL3-201ENST00000380680 KRTAP1-5Q9BYS1 174 aa11.23□□□□□ -0.61
UBL3-201ENST00000380680 TYMSOSQ8TAI1 123 aa11.21□□□□□ -0.61
UBL3-201ENST00000380680 H3BPC8 53 aa11.21□□□□□ -0.62
UBL3-201ENST00000380680 H7BZZ5 65 aa11.21□□□□□ -0.62
UBL3-201ENST00000380680 SPRR4Q96PI1 79 aa11.2□□□□□ -0.62
UBL3-201ENST00000380680 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.19□□□□□ -0.62
UBL3-201ENST00000380680 LINC00313P59037 77 aa11.18□□□□□ -0.62
UBL3-201ENST00000380680 PLA2G1BP04054 148 aaKnown RBP11.18□□□□□ -0.62
UBL3-201ENST00000380680 SPRR1AP35321 89 aa11.18□□□□□ -0.62
UBL3-201ENST00000380680 SPINK1P00995 79 aa11.16□□□□□ -0.62
UBL3-201ENST00000380680 MRPL34Q9BQ48 92 aaKnown RBP11.15□□□□□ -0.62
UBL3-201ENST00000380680 IGLV7-43P04211 117 aa11.14□□□□□ -0.63
UBL3-201ENST00000380680 C8orf17Q9NRJ1 99 aa11.14□□□□□ -0.63
UBL3-201ENST00000380680 TNP2Q05952 138 aa11.14□□□□□ -0.63
UBL3-201ENST00000380680 SSBP3-AS1Q7Z2R9 100 aa11.13□□□□□ -0.63
UBL3-201ENST00000380680 SVEP1Q4LDE5 3571 aa11.12□□□□□ -0.63
UBL3-201ENST00000380680 DSCR10P59022 87 aa11.11□□□□□ -0.63
UBL3-201ENST00000380680 A0A1B0GVX0 72 aa11.1□□□□□ -0.63
UBL3-201ENST00000380680 SVIPQ8NHG7 77 aa11.09□□□□□ -0.63
UBL3-201ENST00000380680 TENM1Q9UKZ4 2725 aa11.08□□□□□ -0.64
UBL3-201ENST00000380680 OCR1Q9BZK8 76 aa11.07□□□□□ -0.64
UBL3-201ENST00000380680 SPAG11AQ6PDA7 123 aa11.06□□□□□ -0.64
UBL3-201ENST00000380680 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
UBL3-201ENST00000380680 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
UBL3-201ENST00000380680 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
UBL3-201ENST00000380680 C8orf87E5RJ46 101 aa11.04□□□□□ -0.64
UBL3-201ENST00000380680 ACYP2P14621 99 aa11.03□□□□□ -0.64
UBL3-201ENST00000380680 Q96NJ1 140 aa11.03□□□□□ -0.64
UBL3-201ENST00000380680 LOC101927531A0A1B0GV80 90 aa11.02□□□□□ -0.64
UBL3-201ENST00000380680 FAM229AH3BQW9 127 aa11.02□□□□□ -0.65
UBL3-201ENST00000380680 TENM3Q9P273 2699 aa11.01□□□□□ -0.65
UBL3-201ENST00000380680 C7orf65Q6ZTY9 151 aa11□□□□□ -0.65
UBL3-201ENST00000380680 CYSTM1Q9H1C7 97 aa10.99□□□□□ -0.65
UBL3-201ENST00000380680 PRO0628Q9UI54 55 aa10.99□□□□□ -0.65
UBL3-201ENST00000380680 VWFP04275 2813 aa10.99□□□□□ -0.65
UBL3-201ENST00000380680 PDZD2O15018 2839 aa10.97□□□□□ -0.65
UBL3-201ENST00000380680 OTOGQ6ZRI0 2925 aa10.96□□□□□ -0.66
UBL3-201ENST00000380680 SPENQ96T58 3664 aaKnown RBP10.95□□□□□ -0.66
UBL3-201ENST00000380680 COA5Q86WW8 74 aa10.95□□□□□ -0.66
UBL3-201ENST00000380680 KRTAP4-16G5E9R7 235 aaPredicted RBP10.94□□□□□ -0.66
UBL3-201ENST00000380680 CUBNO60494 3623 aa10.94□□□□□ -0.66
UBL3-201ENST00000380680 K7ERS5 55 aa10.93□□□□□ -0.66
UBL3-201ENST00000380680 LINC00304Q8N9R0 145 aa10.93□□□□□ -0.66
UBL3-201ENST00000380680 A8MUN3 132 aa10.92□□□□□ -0.66
UBL3-201ENST00000380680 PLAC8Q9NZF1 115 aa10.92□□□□□ -0.66
UBL3-201ENST00000380680 FBN1P35555 2871 aaKnown RBP10.92□□□□□ -0.66
UBL3-201ENST00000380680 SPRR1BP22528 89 aa10.91□□□□□ -0.66
UBL3-201ENST00000380680 A0A1B0GU69 56 aa10.9□□□□□ -0.67
UBL3-201ENST00000380680 PANO1I0J062 215 aa10.89□□□□□ -0.67
UBL3-201ENST00000380680 IGLV8-61A0A075B6I0 122 aa10.88□□□□□ -0.67
UBL3-201ENST00000380680 LINC00336Q6ZUF6 198 aa10.83□□□□□ -0.68
UBL3-201ENST00000380680 LINC00472Q9H8W2 130 aa10.83□□□□□ -0.68
UBL3-201ENST00000380680 NBPF19A0A087WUL8 3843 aa10.81□□□□□ -0.68
UBL3-201ENST00000380680 C9orf92A6NGG3 77 aa10.81□□□□□ -0.68
UBL3-201ENST00000380680 KRTAP7-1Q8IUC3 87 aa10.8□□□□□ -0.68
UBL3-201ENST00000380680 MMP24-AS1A0A0U1RRL7 71 aa10.8□□□□□ -0.68
UBL3-201ENST00000380680 SPANXA2-OT1Q8N9U9 137 aa10.79□□□□□ -0.68
UBL3-201ENST00000380680 CD164Q04900 197 aa10.78□□□□□ -0.68
UBL3-201ENST00000380680 CSMD2Q7Z408 3487 aa10.77□□□□□ -0.68
UBL3-201ENST00000380680 BSNQ9UPA5 3926 aa10.75□□□□□ -0.69
UBL3-201ENST00000380680 KRTAP11-1Q8IUC1 163 aa10.75□□□□□ -0.69
UBL3-201ENST00000380680 KRTAP10-2P60368 255 aa10.74□□□□□ -0.69
UBL3-201ENST00000380680 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
UBL3-201ENST00000380680 PRR26Q8N8Z3 221 aa10.73□□□□□ -0.69
UBL3-201ENST00000380680 ATP11AUNQ6ZP68 121 aa10.72□□□□□ -0.69
UBL3-201ENST00000380680 Q6ZR54 194 aa10.72□□□□□ -0.69
UBL3-201ENST00000380680 ZFHX3Q15911 3703 aa10.72□□□□□ -0.69
UBL3-201ENST00000380680 Q6ZRN7 208 aaPredicted RBP10.69□□□□□ -0.7
UBL3-201ENST00000380680 FAM229BQ4G0N7 80 aa10.68□□□□□ -0.7
UBL3-201ENST00000380680 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
UBL3-201ENST00000380680 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
UBL3-201ENST00000380680 PKD1L1Q8TDX9 2849 aa10.66□□□□□ -0.7
UBL3-201ENST00000380680 IGLV7-46A0A075B6I9 117 aa10.63□□□□□ -0.71
UBL3-201ENST00000380680 LINC00483Q53H64 154 aa10.61□□□□□ -0.71
UBL3-201ENST00000380680 Q8N1X5 172 aa10.61□□□□□ -0.71
UBL3-201ENST00000380680 FP248Q71RG6 208 aaPredicted RBP10.6□□□□□ -0.71
UBL3-201ENST00000380680 OXTP01178 125 aa10.59□□□□□ -0.71
UBL3-201ENST00000380680 Q8N9P0 234 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms