RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ZNF575Q86XF7 245 aa5.6□□□□□ -1.51
VPS36-201ENST00000378060 GIG44P09565 113 aaPredicted RBP5.59□□□□□ -1.51
VPS36-201ENST00000378060 C19orf73Q9NVV2 129 aa5.59□□□□□ -1.52
VPS36-201ENST00000378060 EPM2AB3EWF7 344 aa5.58□□□□□ -1.52
VPS36-201ENST00000378060 MOBPQ13875 183 aa5.58□□□□□ -1.52
VPS36-201ENST00000378060 LINC00588Q9Y4M8 146 aa5.58□□□□□ -1.52
VPS36-201ENST00000378060 IGLV1-50A0A075B6I6 118 aa5.57□□□□□ -1.52
VPS36-201ENST00000378060 A0A1B0GU69 56 aa5.57□□□□□ -1.52
VPS36-201ENST00000378060 A8MWP4 228 aa5.57□□□□□ -1.52
VPS36-201ENST00000378060 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
VPS36-201ENST00000378060 H7BZZ5 65 aa5.56□□□□□ -1.52
VPS36-201ENST00000378060 NBEAL2Q6ZNJ1 2754 aa5.56□□□□□ -1.52
VPS36-201ENST00000378060 K7EQZ3 153 aa5.56□□□□□ -1.52
VPS36-201ENST00000378060 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
VPS36-201ENST00000378060 SPINK1P00995 79 aa5.56□□□□□ -1.52
VPS36-201ENST00000378060 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
VPS36-201ENST00000378060 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
VPS36-201ENST00000378060 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
VPS36-201ENST00000378060 CYP4F30PQ9H0H9 118 aa5.55□□□□□ -1.52
VPS36-201ENST00000378060 SERTAD4-AS1Q5TG53 156 aa5.55□□□□□ -1.52
VPS36-201ENST00000378060 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
VPS36-201ENST00000378060 OBSCN-AS1Q96MR7 158 aa5.54□□□□□ -1.52
VPS36-201ENST00000378060 Q8N377 158 aa5.54□□□□□ -1.52
VPS36-201ENST00000378060 DNAH3Q8TD57 4116 aa5.54□□□□□ -1.52
VPS36-201ENST00000378060 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
VPS36-201ENST00000378060 RPL37AP61513 92 aaKnown RBP5.53□□□□□ -1.52
VPS36-201ENST00000378060 NBDYA0A0U1RRE5 68 aa5.53□□□□□ -1.52
VPS36-201ENST00000378060 TLX1NBP0CAT3 122 aa5.53□□□□□ -1.52
VPS36-201ENST00000378060 C15orf56Q8N910 161 aa5.53□□□□□ -1.52
VPS36-201ENST00000378060 C9orf129Q5T035 196 aaKnown RBP5.52□□□□□ -1.53
VPS36-201ENST00000378060 PRR15Q8IV56 129 aa5.52□□□□□ -1.53
VPS36-201ENST00000378060 MEGF8Q7Z7M0 2845 aa5.52□□□□□ -1.53
VPS36-201ENST00000378060 C8orf87E5RJ46 101 aa5.51□□□□□ -1.53
VPS36-201ENST00000378060 FAM168BA1KXE4 195 aa5.51□□□□□ -1.53
VPS36-201ENST00000378060 IGFL1Q6UW32 110 aa5.51□□□□□ -1.53
VPS36-201ENST00000378060 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
VPS36-201ENST00000378060 LINC00313P59037 77 aa5.51□□□□□ -1.53
VPS36-201ENST00000378060 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
VPS36-201ENST00000378060 A8MUN3 132 aa5.5□□□□□ -1.53
VPS36-201ENST00000378060 FAM229AH3BQW9 127 aa5.5□□□□□ -1.53
VPS36-201ENST00000378060 SPACA4Q8TDM5 124 aa5.49□□□□□ -1.53
VPS36-201ENST00000378060 CHTF8P0CG12 524 aa5.49□□□□□ -1.53
VPS36-201ENST00000378060 COA5Q86WW8 74 aa5.49□□□□□ -1.53
VPS36-201ENST00000378060 COL7A1Q02388 2944 aa5.49□□□□□ -1.53
VPS36-201ENST00000378060 LINC00336Q6ZUF6 198 aa5.48□□□□□ -1.53
VPS36-201ENST00000378060 RTL8CO15255 209 aa5.48□□□□□ -1.53
VPS36-201ENST00000378060 ATP11AUNQ6ZP68 121 aa5.47□□□□□ -1.53
VPS36-201ENST00000378060 FAM104AQ969W3 186 aa5.47□□□□□ -1.53
VPS36-201ENST00000378060 IGLV5-48A0A075B6I7 105 aa5.47□□□□□ -1.53
VPS36-201ENST00000378060 PRKDCP78527 4128 aaKnown RBP5.47□□□□□ -1.53
VPS36-201ENST00000378060 A0A1W2PNM2 257 aa5.46□□□□□ -1.54
VPS36-201ENST00000378060 C8orf17Q9NRJ1 99 aa5.46□□□□□ -1.54
VPS36-201ENST00000378060 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
VPS36-201ENST00000378060 TENM3Q9P273 2699 aa5.44□□□□□ -1.54
VPS36-201ENST00000378060 KRTAP10-11P60412 298 aa5.44□□□□□ -1.54
VPS36-201ENST00000378060 SSBP3-AS1Q7Z2R9 100 aa5.44□□□□□ -1.54
VPS36-201ENST00000378060 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
VPS36-201ENST00000378060 A0A1B0GVX0 72 aa5.44□□□□□ -1.54
VPS36-201ENST00000378060 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
VPS36-201ENST00000378060 UQCR11O14957 56 aa5.42□□□□□ -1.54
VPS36-201ENST00000378060 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
VPS36-201ENST00000378060 OCR1Q9BZK8 76 aa5.42□□□□□ -1.54
VPS36-201ENST00000378060 TGP01266 2768 aa5.41□□□□□ -1.54
VPS36-201ENST00000378060 ZNF861PO60384 105 aa5.41□□□□□ -1.54
VPS36-201ENST00000378060 CNBPP62633 177 aaKnown RBP5.4□□□□□ -1.54
VPS36-201ENST00000378060 WIPF1O43516 503 aa5.39□□□□□ -1.55
VPS36-201ENST00000378060 SPRR4Q96PI1 79 aa5.39□□□□□ -1.55
VPS36-201ENST00000378060 HUWE1Q7Z6Z7 4374 aaKnown RBP5.39□□□□□ -1.55
VPS36-201ENST00000378060 K7EIL1 84 aa5.39□□□□□ -1.55
VPS36-201ENST00000378060 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
VPS36-201ENST00000378060 CD164Q04900 197 aa5.38□□□□□ -1.55
VPS36-201ENST00000378060 Q96NJ1 140 aa5.38□□□□□ -1.55
VPS36-201ENST00000378060 FBN3Q75N90 2809 aa5.37□□□□□ -1.55
VPS36-201ENST00000378060 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
VPS36-201ENST00000378060 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
VPS36-201ENST00000378060 CSMD3Q7Z407 3707 aa5.37□□□□□ -1.55
VPS36-201ENST00000378060 LYSTQ99698 3801 aa5.37□□□□□ -1.55
VPS36-201ENST00000378060 Q1T7F1 81 aa5.36□□□□□ -1.55
VPS36-201ENST00000378060 IGLV8-61A0A075B6I0 122 aa5.35□□□□□ -1.55
VPS36-201ENST00000378060 PLA2G1BP04054 148 aaKnown RBP5.35□□□□□ -1.55
VPS36-201ENST00000378060 A0A087WTM6 91 aa5.34□□□□□ -1.55
VPS36-201ENST00000378060 DSCR10P59022 87 aa5.34□□□□□ -1.55
VPS36-201ENST00000378060 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
VPS36-201ENST00000378060 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
VPS36-201ENST00000378060 CASC10Q5T4H9 136 aa5.34□□□□□ -1.55
VPS36-201ENST00000378060 STAB2Q8WWQ8 2551 aa5.33□□□□□ -1.56
VPS36-201ENST00000378060 KRTAP21-3Q3LHN1 58 aa5.32□□□□□ -1.56
VPS36-201ENST00000378060 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
VPS36-201ENST00000378060 PSORS1C2Q9UIG4 136 aa5.31□□□□□ -1.56
VPS36-201ENST00000378060 WWC2-AS2Q96NR7 200 aa5.31□□□□□ -1.56
VPS36-201ENST00000378060 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
VPS36-201ENST00000378060 TENM2Q9NT68 2774 aa5.3□□□□□ -1.56
VPS36-201ENST00000378060 APLNQ9ULZ1 77 aa5.3□□□□□ -1.56
VPS36-201ENST00000378060 LCA10Q71F78 164 aa5.3□□□□□ -1.56
VPS36-201ENST00000378060 SPRR1AP35321 89 aa5.3□□□□□ -1.56
VPS36-201ENST00000378060 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
VPS36-201ENST00000378060 Q8NDZ9 215 aa5.28□□□□□ -1.56
VPS36-201ENST00000378060 DNAH7Q8WXX0 4024 aa5.28□□□□□ -1.56
VPS36-201ENST00000378060 LINC00304Q8N9R0 145 aa5.28□□□□□ -1.56
VPS36-201ENST00000378060 Q5XG85 94 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms