RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 CD164Q04900 197 aa13.95□□□□□ -0.18
SYNDIG1-201ENST00000376862 LINC01556Q5JQF7 62 aa13.95□□□□□ -0.18
SYNDIG1-201ENST00000376862 KRTAP29-1A8MX34 341 aaPredicted RBP13.94□□□□□ -0.18
SYNDIG1-201ENST00000376862 MRPL55Q7Z7F7 128 aaKnown RBP13.94□□□□□ -0.18
SYNDIG1-201ENST00000376862 F8P00451 2351 aa13.93□□□□□ -0.18
SYNDIG1-201ENST00000376862 SPANXA2-OT1Q8N9U9 137 aa13.93□□□□□ -0.18
SYNDIG1-201ENST00000376862 LIMD2Q9BT23 127 aa13.92□□□□□ -0.18
SYNDIG1-201ENST00000376862 LINC00588Q9Y4M8 146 aa13.9□□□□□ -0.18
SYNDIG1-201ENST00000376862 CASC10Q5T4H9 136 aa13.9□□□□□ -0.18
SYNDIG1-201ENST00000376862 REG3GQ6UW15 175 aa13.89□□□□□ -0.19
SYNDIG1-201ENST00000376862 CASC2Q6XLA1 102 aa13.88□□□□□ -0.19
SYNDIG1-201ENST00000376862 SPTSSBQ8NFR3 76 aa13.88□□□□□ -0.19
SYNDIG1-201ENST00000376862 LCA10Q71F78 164 aa13.85□□□□□ -0.19
SYNDIG1-201ENST00000376862 CNBPP62633 177 aaKnown RBP13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 FLNBO75369 2602 aaKnown RBP13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 H3BPC8 53 aa13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 KTN1-AS1Q86SY8 53 aa13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 C9orf163Q8N9P6 203 aa13.83□□□□□ -0.2
SYNDIG1-201ENST00000376862 PRLHP81277 87 aa13.82□□□□□ -0.2
SYNDIG1-201ENST00000376862 Q75L30 129 aa13.8□□□□□ -0.2
SYNDIG1-201ENST00000376862 COA5Q86WW8 74 aa13.79□□□□□ -0.2
SYNDIG1-201ENST00000376862 IGLV8-61A0A075B6I0 122 aa13.79□□□□□ -0.2
SYNDIG1-201ENST00000376862 A6NED7 52 aa13.79□□□□□ -0.2
SYNDIG1-201ENST00000376862 BAHCC1Q9P281 2608 aa13.78□□□□□ -0.2
SYNDIG1-201ENST00000376862 DNAH10OSP0CZ25 163 aa13.78□□□□□ -0.2
SYNDIG1-201ENST00000376862 DEFB131BA0A096LNP1 70 aa13.75□□□□□ -0.21
SYNDIG1-201ENST00000376862 ATP11AUNQ6ZP68 121 aa13.75□□□□□ -0.21
SYNDIG1-201ENST00000376862 RBM12B-AS1Q9P1G2 102 aa13.75□□□□□ -0.21
SYNDIG1-201ENST00000376862 TENM3Q9P273 2699 aa13.74□□□□□ -0.21
SYNDIG1-201ENST00000376862 LOC101927531A0A1B0GV80 90 aa13.74□□□□□ -0.21
SYNDIG1-201ENST00000376862 A8MWP4 228 aa13.73□□□□□ -0.21
SYNDIG1-201ENST00000376862 ANK2Q01484 3957 aa13.72□□□□□ -0.21
SYNDIG1-201ENST00000376862 DNAH1Q9P2D7 4330 aa13.72□□□□□ -0.21
SYNDIG1-201ENST00000376862 OXLD1Q5BKU9 147 aa13.7□□□□□ -0.22
SYNDIG1-201ENST00000376862 A6NN06 94 aa13.7□□□□□ -0.22
SYNDIG1-201ENST00000376862 LINC00472Q9H8W2 130 aa13.69□□□□□ -0.22
SYNDIG1-201ENST00000376862 IGLV7-46A0A075B6I9 117 aa13.69□□□□□ -0.22
SYNDIG1-201ENST00000376862 FBN1P35555 2871 aaKnown RBP13.69□□□□□ -0.22
SYNDIG1-201ENST00000376862 SRRM2Q9UQ35 2752 aaKnown RBP13.67□□□□□ -0.22
SYNDIG1-201ENST00000376862 PCOTHQ58A44 107 aa13.66□□□□□ -0.22
SYNDIG1-201ENST00000376862 STAB1Q9NY15 2570 aa13.66□□□□□ -0.22
SYNDIG1-201ENST00000376862 H0Y9J4 135 aa13.64□□□□□ -0.23
SYNDIG1-201ENST00000376862 CDC42SE1Q9NRR8 79 aa13.64□□□□□ -0.23
SYNDIG1-201ENST00000376862 MMP24-AS1A0A0U1RRL7 71 aa13.64□□□□□ -0.23
SYNDIG1-201ENST00000376862 IGKV2-24A0A0C4DH68 120 aa13.63□□□□□ -0.23
SYNDIG1-201ENST00000376862 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
SYNDIG1-201ENST00000376862 NDUFS5O43920 106 aa13.63□□□□□ -0.23
SYNDIG1-201ENST00000376862 SPAG11AQ6PDA7 123 aa13.62□□□□□ -0.23
SYNDIG1-201ENST00000376862 KRTAP10-11P60412 298 aa13.61□□□□□ -0.23
SYNDIG1-201ENST00000376862 A0A096LNI7 61 aa13.61□□□□□ -0.23
SYNDIG1-201ENST00000376862 PHF5AQ7RTV0 110 aaKnown RBP13.61□□□□□ -0.23
SYNDIG1-201ENST00000376862 KRTAP24-1Q3LI83 254 aa13.58□□□□□ -0.24
SYNDIG1-201ENST00000376862 LINC01558Q9Y6Z2 57 aa13.57□□□□□ -0.24
SYNDIG1-201ENST00000376862 TENM2Q9NT68 2774 aa13.57□□□□□ -0.24
SYNDIG1-201ENST00000376862 MAST4O15021 2626 aa13.56□□□□□ -0.24
SYNDIG1-201ENST00000376862 MOBPQ13875 183 aa13.56□□□□□ -0.24
SYNDIG1-201ENST00000376862 KRTAP11-1Q8IUC1 163 aa13.56□□□□□ -0.24
SYNDIG1-201ENST00000376862 PLAC8Q9NZF1 115 aa13.55□□□□□ -0.24
SYNDIG1-201ENST00000376862 CMYA5Q8N3K9 4069 aa13.53□□□□□ -0.24
SYNDIG1-201ENST00000376862 SPRR1BP22528 89 aa13.52□□□□□ -0.25
SYNDIG1-201ENST00000376862 SPINK7P58062 85 aa13.51□□□□□ -0.25
SYNDIG1-201ENST00000376862 NOTCH1P46531 2555 aa13.5□□□□□ -0.25
SYNDIG1-201ENST00000376862 C7orf65Q6ZTY9 151 aa13.5□□□□□ -0.25
SYNDIG1-201ENST00000376862 DNAH10Q8IVF4 4471 aa13.5□□□□□ -0.25
SYNDIG1-201ENST00000376862 CSMD3Q7Z407 3707 aa13.46□□□□□ -0.25
SYNDIG1-201ENST00000376862 HRES1P13985 223 aa13.46□□□□□ -0.26
SYNDIG1-201ENST00000376862 TP53AIP1Q9HCN2 124 aa13.44□□□□□ -0.26
SYNDIG1-201ENST00000376862 CHTF8P0CG12 524 aa13.43□□□□□ -0.26
SYNDIG1-201ENST00000376862 ASB16-AS1Q495Z4 193 aa13.43□□□□□ -0.26
SYNDIG1-201ENST00000376862 Q6ZR54 194 aa13.43□□□□□ -0.26
SYNDIG1-201ENST00000376862 Q96NJ1 140 aa13.42□□□□□ -0.26
SYNDIG1-201ENST00000376862 COL6A5A8TX70 2615 aa13.41□□□□□ -0.26
SYNDIG1-201ENST00000376862 C8orf17Q9NRJ1 99 aa13.39□□□□□ -0.27
SYNDIG1-201ENST00000376862 NBEAL1Q6ZS30 2694 aa13.36□□□□□ -0.27
SYNDIG1-201ENST00000376862 DNAH3Q8TD57 4116 aa13.33□□□□□ -0.28
SYNDIG1-201ENST00000376862 IGHV6-1A0A0B4J1U7 121 aa13.33□□□□□ -0.28
SYNDIG1-201ENST00000376862 KRTAP1-5Q9BYS1 174 aa13.32□□□□□ -0.28
SYNDIG1-201ENST00000376862 IGLV9-49A0A0B4J1Y8 123 aa13.31□□□□□ -0.28
SYNDIG1-201ENST00000376862 LYSTQ99698 3801 aa13.3□□□□□ -0.28
SYNDIG1-201ENST00000376862 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
SYNDIG1-201ENST00000376862 DNAH9Q9NYC9 4486 aa13.27□□□□□ -0.28
SYNDIG1-201ENST00000376862 A0A1B0GVX0 72 aa13.26□□□□□ -0.29
SYNDIG1-201ENST00000376862 MRPL34Q9BQ48 92 aaKnown RBP13.24□□□□□ -0.29
SYNDIG1-201ENST00000376862 K7EIL1 84 aa13.24□□□□□ -0.29
SYNDIG1-201ENST00000376862 A0A087X002 238 aa13.23□□□□□ -0.29
SYNDIG1-201ENST00000376862 NOTCH2NLQ7Z3S9 236 aa13.23□□□□□ -0.29
SYNDIG1-201ENST00000376862 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
SYNDIG1-201ENST00000376862 LINC00313P59037 77 aa13.22□□□□□ -0.29
SYNDIG1-201ENST00000376862 KRTAP13-1Q8IUC0 172 aa13.22□□□□□ -0.29
SYNDIG1-201ENST00000376862 PRAC1Q96KF2 57 aa13.21□□□□□ -0.29
SYNDIG1-201ENST00000376862 MGAM2Q2M2H8 2515 aa13.18□□□□□ -0.3
SYNDIG1-201ENST00000376862 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
SYNDIG1-201ENST00000376862 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
SYNDIG1-201ENST00000376862 C8orf87E5RJ46 101 aa13.16□□□□□ -0.3
SYNDIG1-201ENST00000376862 PANO1I0J062 215 aa13.16□□□□□ -0.3
SYNDIG1-201ENST00000376862 HUWE1Q7Z6Z7 4374 aaKnown RBP13.15□□□□□ -0.3
SYNDIG1-201ENST00000376862 MDFIQ99750 246 aa13.15□□□□□ -0.3
SYNDIG1-201ENST00000376862 Q5W150 140 aa13.13□□□□□ -0.31
SYNDIG1-201ENST00000376862 ADM2Q7Z4H4 148 aa13.13□□□□□ -0.31
SYNDIG1-201ENST00000376862 C14orf177Q52M58 125 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms