RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PRLHP81277 87 aa10.41□□□□□ -0.74
TRIM39-201ENST00000376656 A8MUN3 132 aa10.4□□□□□ -0.74
TRIM39-201ENST00000376656 LINC00588Q9Y4M8 146 aa10.4□□□□□ -0.74
TRIM39-201ENST00000376656 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
TRIM39-201ENST00000376656 B9D2Q9BPU9 175 aa10.38□□□□□ -0.75
TRIM39-201ENST00000376656 HECTD1Q9ULT8 2610 aa10.36□□□□□ -0.75
TRIM39-201ENST00000376656 A8MU10 97 aa10.35□□□□□ -0.75
TRIM39-201ENST00000376656 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
TRIM39-201ENST00000376656 H0Y9P7 68 aa10.35□□□□□ -0.75
TRIM39-201ENST00000376656 FLNBO75369 2602 aaKnown RBP10.34□□□□□ -0.75
TRIM39-201ENST00000376656 PMAIP1Q13794 54 aa10.34□□□□□ -0.75
TRIM39-201ENST00000376656 CASC2Q6XLA1 102 aa10.33□□□□□ -0.76
TRIM39-201ENST00000376656 IGKV2-24A0A0C4DH68 120 aa10.32□□□□□ -0.76
TRIM39-201ENST00000376656 Q5VV11 94 aa10.32□□□□□ -0.76
TRIM39-201ENST00000376656 CNBPP62633 177 aaKnown RBP10.32□□□□□ -0.76
TRIM39-201ENST00000376656 A0A096LNI7 61 aa10.31□□□□□ -0.76
TRIM39-201ENST00000376656 J3QKU1 62 aa10.31□□□□□ -0.76
TRIM39-201ENST00000376656 UBE2AP49459 152 aa10.31□□□□□ -0.76
TRIM39-201ENST00000376656 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
TRIM39-201ENST00000376656 SRRM2Q9UQ35 2752 aaKnown RBP10.3□□□□□ -0.76
TRIM39-201ENST00000376656 SPANXA2-OT1Q8N9U9 137 aa10.29□□□□□ -0.76
TRIM39-201ENST00000376656 Q8N9P0 234 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-201ENST00000376656 DNAH10Q8IVF4 4471 aa10.27□□□□□ -0.77
TRIM39-201ENST00000376656 H3BPC8 53 aa10.25□□□□□ -0.77
TRIM39-201ENST00000376656 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
TRIM39-201ENST00000376656 CMYA5Q8N3K9 4069 aa10.25□□□□□ -0.77
TRIM39-201ENST00000376656 A8MWP4 228 aa10.25□□□□□ -0.77
TRIM39-201ENST00000376656 LINC00472Q9H8W2 130 aa10.25□□□□□ -0.77
TRIM39-201ENST00000376656 C9orf163Q8N9P6 203 aa10.24□□□□□ -0.77
TRIM39-201ENST00000376656 C16orf90A8MZG2 172 aa10.24□□□□□ -0.77
TRIM39-201ENST00000376656 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
TRIM39-201ENST00000376656 MAST4O15021 2626 aa10.23□□□□□ -0.77
TRIM39-201ENST00000376656 PRR15LQ9BU68 103 aa10.22□□□□□ -0.77
TRIM39-201ENST00000376656 PHF5AQ7RTV0 110 aaKnown RBP10.21□□□□□ -0.78
TRIM39-201ENST00000376656 LIMD2Q9BT23 127 aa10.21□□□□□ -0.78
TRIM39-201ENST00000376656 H0Y9J4 135 aa10.19□□□□□ -0.78
TRIM39-201ENST00000376656 CHTF8P0CG12 524 aa10.19□□□□□ -0.78
TRIM39-201ENST00000376656 NOTCH1P46531 2555 aa10.19□□□□□ -0.78
TRIM39-201ENST00000376656 KMT2BQ9UMN6 2715 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-201ENST00000376656 MMP24-AS1A0A0U1RRL7 71 aa10.18□□□□□ -0.78
TRIM39-201ENST00000376656 SPRR1BP22528 89 aa10.18□□□□□ -0.78
TRIM39-201ENST00000376656 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
TRIM39-201ENST00000376656 COA5Q86WW8 74 aa10.17□□□□□ -0.78
TRIM39-201ENST00000376656 STAB1Q9NY15 2570 aa10.16□□□□□ -0.78
TRIM39-201ENST00000376656 DNAH3Q8TD57 4116 aa10.16□□□□□ -0.78
TRIM39-201ENST00000376656 FBN1P35555 2871 aaKnown RBP10.14□□□□□ -0.79
TRIM39-201ENST00000376656 LYSTQ99698 3801 aa10.14□□□□□ -0.79
TRIM39-201ENST00000376656 PCOTHQ58A44 107 aa10.13□□□□□ -0.79
TRIM39-201ENST00000376656 IGLV7-46A0A075B6I9 117 aa10.13□□□□□ -0.79
TRIM39-201ENST00000376656 CD164Q04900 197 aa10.12□□□□□ -0.79
TRIM39-201ENST00000376656 DNAH9Q9NYC9 4486 aa10.12□□□□□ -0.79
TRIM39-201ENST00000376656 LCA10Q71F78 164 aa10.12□□□□□ -0.79
TRIM39-201ENST00000376656 TENM2Q9NT68 2774 aa10.12□□□□□ -0.79
TRIM39-201ENST00000376656 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
TRIM39-201ENST00000376656 SPTSSBQ8NFR3 76 aa10.11□□□□□ -0.79
TRIM39-201ENST00000376656 Q75L30 129 aa10.1□□□□□ -0.79
TRIM39-201ENST00000376656 CSMD3Q7Z407 3707 aa10.1□□□□□ -0.79
TRIM39-201ENST00000376656 COL6A5A8TX70 2615 aa10.09□□□□□ -0.79
TRIM39-201ENST00000376656 NBEAL1Q6ZS30 2694 aa10.09□□□□□ -0.79
TRIM39-201ENST00000376656 LOC101927531A0A1B0GV80 90 aa10.09□□□□□ -0.79
TRIM39-201ENST00000376656 A6NED7 52 aa10.09□□□□□ -0.79
TRIM39-201ENST00000376656 Q96NJ1 140 aa10.06□□□□□ -0.8
TRIM39-201ENST00000376656 KRTAP24-1Q3LI83 254 aa10.05□□□□□ -0.8
TRIM39-201ENST00000376656 ASB16-AS1Q495Z4 193 aa10.04□□□□□ -0.8
TRIM39-201ENST00000376656 H3BS24 57 aa10.03□□□□□ -0.8
TRIM39-201ENST00000376656 SPAG11AQ6PDA7 123 aa10.03□□□□□ -0.8
TRIM39-201ENST00000376656 IGLV9-49A0A0B4J1Y8 123 aa10.02□□□□□ -0.8
TRIM39-201ENST00000376656 ATP11AUNQ6ZP68 121 aa10.02□□□□□ -0.81
TRIM39-201ENST00000376656 KTN1-AS1Q86SY8 53 aa10.01□□□□□ -0.81
TRIM39-201ENST00000376656 TP53AIP1Q9HCN2 124 aa10.01□□□□□ -0.81
TRIM39-201ENST00000376656 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
TRIM39-201ENST00000376656 COL7A1Q02388 2944 aa10□□□□□ -0.81
TRIM39-201ENST00000376656 PANO1I0J062 215 aa10□□□□□ -0.81
TRIM39-201ENST00000376656 MOBPQ13875 183 aa10□□□□□ -0.81
TRIM39-201ENST00000376656 KRTAP13-1Q8IUC0 172 aa10□□□□□ -0.81
TRIM39-201ENST00000376656 Q6ZR54 194 aa9.99□□□□□ -0.81
TRIM39-201ENST00000376656 NDUFS5O43920 106 aa9.99□□□□□ -0.81
TRIM39-201ENST00000376656 LINC01558Q9Y6Z2 57 aa9.99□□□□□ -0.81
TRIM39-201ENST00000376656 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
TRIM39-201ENST00000376656 CDC42SE1Q9NRR8 79 aa9.97□□□□□ -0.81
TRIM39-201ENST00000376656 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
TRIM39-201ENST00000376656 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
TRIM39-201ENST00000376656 C14orf177Q52M58 125 aa9.97□□□□□ -0.81
TRIM39-201ENST00000376656 A6NN06 94 aa9.96□□□□□ -0.81
TRIM39-201ENST00000376656 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.82
TRIM39-201ENST00000376656 HRES1P13985 223 aa9.95□□□□□ -0.82
TRIM39-201ENST00000376656 K7EIL1 84 aa9.95□□□□□ -0.82
TRIM39-201ENST00000376656 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
TRIM39-201ENST00000376656 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
TRIM39-201ENST00000376656 A0A087X002 238 aa9.91□□□□□ -0.82
TRIM39-201ENST00000376656 SPINK7P58062 85 aa9.91□□□□□ -0.82
TRIM39-201ENST00000376656 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
TRIM39-201ENST00000376656 DNAH7Q8WXX0 4024 aa9.9□□□□□ -0.82
TRIM39-201ENST00000376656 MRPL34Q9BQ48 92 aaKnown RBP9.9□□□□□ -0.83
TRIM39-201ENST00000376656 APLNQ9ULZ1 77 aa9.87□□□□□ -0.83
TRIM39-201ENST00000376656 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
TRIM39-201ENST00000376656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-201ENST00000376656 LINC00483Q53H64 154 aa9.86□□□□□ -0.83
TRIM39-201ENST00000376656 ANAPC11Q9NYG5 84 aa9.85□□□□□ -0.83
TRIM39-201ENST00000376656 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms