RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
MSH5-201ENST00000375703 DEFB116Q30KQ4 102 aa9.13□□□□□ -0.95
MSH5-201ENST00000375703 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
MSH5-201ENST00000375703 HCG22E2RYF7 251 aa9.11□□□□□ -0.95
MSH5-201ENST00000375703 UBE2AP49459 152 aa9.11□□□□□ -0.95
MSH5-201ENST00000375703 BAHCC1Q9P281 2608 aa9.11□□□□□ -0.95
MSH5-201ENST00000375703 A0A087WSZ3 146 aa9.11□□□□□ -0.95
MSH5-201ENST00000375703 PHF5AQ7RTV0 110 aaKnown RBP9.11□□□□□ -0.95
MSH5-201ENST00000375703 NBEAL1Q6ZS30 2694 aa9.1□□□□□ -0.95
MSH5-201ENST00000375703 CHTF8P0CG12 524 aa9.1□□□□□ -0.95
MSH5-201ENST00000375703 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
MSH5-201ENST00000375703 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
MSH5-201ENST00000375703 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
MSH5-201ENST00000375703 APLNQ9ULZ1 77 aa9.08□□□□□ -0.96
MSH5-201ENST00000375703 COL6A5A8TX70 2615 aa9.07□□□□□ -0.96
MSH5-201ENST00000375703 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
MSH5-201ENST00000375703 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
MSH5-201ENST00000375703 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
MSH5-201ENST00000375703 LYSTQ99698 3801 aa9.05□□□□□ -0.96
MSH5-201ENST00000375703 H0Y9J4 135 aa9.04□□□□□ -0.96
MSH5-201ENST00000375703 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
MSH5-201ENST00000375703 C9orf163Q8N9P6 203 aa9.03□□□□□ -0.96
MSH5-201ENST00000375703 DNAH9Q9NYC9 4486 aa9.03□□□□□ -0.96
MSH5-201ENST00000375703 SPRR1BP22528 89 aa9.03□□□□□ -0.96
MSH5-201ENST00000375703 PMAIP1Q13794 54 aa9□□□□□ -0.97
MSH5-201ENST00000375703 LRCOL1A6NCL2 159 aa9□□□□□ -0.97
MSH5-201ENST00000375703 B9D2Q9BPU9 175 aa9□□□□□ -0.97
MSH5-201ENST00000375703 hDV103S1A0JD37 113 aa8.98□□□□□ -0.97
MSH5-201ENST00000375703 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
MSH5-201ENST00000375703 MP68P56378 58 aa8.97□□□□□ -0.97
MSH5-201ENST00000375703 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
MSH5-201ENST00000375703 C1orf64Q8NEQ6 169 aa8.97□□□□□ -0.97
MSH5-201ENST00000375703 LINC00472Q9H8W2 130 aa8.96□□□□□ -0.97
MSH5-201ENST00000375703 NBDYA0A0U1RRE5 68 aa8.96□□□□□ -0.98
MSH5-201ENST00000375703 CASC2Q6XLA1 102 aa8.96□□□□□ -0.98
MSH5-201ENST00000375703 COL7A1Q02388 2944 aa8.96□□□□□ -0.98
MSH5-201ENST00000375703 MGAM2Q2M2H8 2515 aa8.96□□□□□ -0.98
MSH5-201ENST00000375703 PANO1I0J062 215 aa8.96□□□□□ -0.98
MSH5-201ENST00000375703 STAB2Q8WWQ8 2551 aa8.95□□□□□ -0.98
MSH5-201ENST00000375703 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
MSH5-201ENST00000375703 A8MWP4 228 aa8.95□□□□□ -0.98
MSH5-201ENST00000375703 NDUFB1O75438 58 aa8.95□□□□□ -0.98
MSH5-201ENST00000375703 LINC00208Q96KT6 92 aa8.94□□□□□ -0.98
MSH5-201ENST00000375703 PRR4Q16378 134 aa8.93□□□□□ -0.98
MSH5-201ENST00000375703 MDFIQ99750 246 aa8.92□□□□□ -0.98
MSH5-201ENST00000375703 Q6ZRN7 208 aaPredicted RBP8.92□□□□□ -0.98
MSH5-201ENST00000375703 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
MSH5-201ENST00000375703 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
MSH5-201ENST00000375703 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
MSH5-201ENST00000375703 CSMD3Q7Z407 3707 aa8.91□□□□□ -0.98
MSH5-201ENST00000375703 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.98
MSH5-201ENST00000375703 H0Y9P7 68 aa8.9□□□□□ -0.98
MSH5-201ENST00000375703 DYNC2H1Q8NCM8 4307 aaKnown RBP8.89□□□□□ -0.99
MSH5-201ENST00000375703 NUPR2A6NF83 97 aa8.88□□□□□ -0.99
MSH5-201ENST00000375703 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.88□□□□□ -0.99
MSH5-201ENST00000375703 TENM2Q9NT68 2774 aa8.87□□□□□ -0.99
MSH5-201ENST00000375703 IGLV9-49A0A0B4J1Y8 123 aa8.87□□□□□ -0.99
MSH5-201ENST00000375703 H3BPC8 53 aa8.87□□□□□ -0.99
MSH5-201ENST00000375703 SPACA4Q8TDM5 124 aa8.87□□□□□ -0.99
MSH5-201ENST00000375703 Q1T7F1 81 aa8.85□□□□□ -0.99
MSH5-201ENST00000375703 MMP24-AS1A0A0U1RRL7 71 aa8.84□□□□□ -0.99
MSH5-201ENST00000375703 PSPHP1O15172 72 aa8.83□□□□□ -1
MSH5-201ENST00000375703 PLECQ15149 4684 aaKnown RBP8.83□□□□□ -1
MSH5-201ENST00000375703 CD164Q04900 197 aa8.81□□□□□ -1
MSH5-201ENST00000375703 SPANXA2-OT1Q8N9U9 137 aa8.81□□□□□ -1
MSH5-201ENST00000375703 Q96NJ1 140 aa8.81□□□□□ -1
MSH5-201ENST00000375703 A0A087WTM6 91 aa8.81□□□□□ -1
MSH5-201ENST00000375703 LINC00483Q53H64 154 aa8.8□□□□□ -1
MSH5-201ENST00000375703 A8MU10 97 aa8.78□□□□□ -1
MSH5-201ENST00000375703 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
MSH5-201ENST00000375703 MOBPQ13875 183 aa8.77□□□□□ -1.01
MSH5-201ENST00000375703 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
MSH5-201ENST00000375703 RTL8CO15255 209 aa8.76□□□□□ -1.01
MSH5-201ENST00000375703 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
MSH5-201ENST00000375703 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
MSH5-201ENST00000375703 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
MSH5-201ENST00000375703 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
MSH5-201ENST00000375703 TP53AIP1Q9HCN2 124 aa8.74□□□□□ -1.01
MSH5-201ENST00000375703 ANAPC11Q9NYG5 84 aa8.74□□□□□ -1.01
MSH5-201ENST00000375703 IGHV6-1A0A0B4J1U7 121 aa8.72□□□□□ -1.01
MSH5-201ENST00000375703 ZNF861PO60384 105 aa8.72□□□□□ -1.01
MSH5-201ENST00000375703 A0A1B0GVX0 72 aa8.71□□□□□ -1.01
MSH5-201ENST00000375703 CDK2AP2O75956 126 aa8.71□□□□□ -1.01
MSH5-201ENST00000375703 PLAC8Q9NZF1 115 aa8.71□□□□□ -1.01
MSH5-201ENST00000375703 NDUFS5O43920 106 aa8.7□□□□□ -1.02
MSH5-201ENST00000375703 VPS13DQ5THJ4 4388 aa8.7□□□□□ -1.02
MSH5-201ENST00000375703 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
MSH5-201ENST00000375703 A8MUN3 132 aa8.68□□□□□ -1.02
MSH5-201ENST00000375703 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
MSH5-201ENST00000375703 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
MSH5-201ENST00000375703 Q6ZR54 194 aa8.67□□□□□ -1.02
MSH5-201ENST00000375703 STARD9Q9P2P6 4700 aa8.66□□□□□ -1.02
MSH5-201ENST00000375703 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
MSH5-201ENST00000375703 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
MSH5-201ENST00000375703 HECTD4Q9Y4D8 3996 aa8.65□□□□□ -1.03
MSH5-201ENST00000375703 COA5Q86WW8 74 aa8.64□□□□□ -1.03
MSH5-201ENST00000375703 A0A087X002 238 aa8.64□□□□□ -1.03
MSH5-201ENST00000375703 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
MSH5-201ENST00000375703 SPTSSBQ8NFR3 76 aa8.63□□□□□ -1.03
MSH5-201ENST00000375703 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms