RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 UBE2AP49459 152 aa7.72□□□□□ -1.17
UBR4-203ENST00000375225 HIGD2AQ9BW72 106 aa7.71□□□□□ -1.18
UBR4-203ENST00000375225 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.18
UBR4-203ENST00000375225 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
UBR4-203ENST00000375225 LY6G6CO95867 125 aa7.69□□□□□ -1.18
UBR4-203ENST00000375225 PRLHP81277 87 aa7.69□□□□□ -1.18
UBR4-203ENST00000375225 TENM2Q9NT68 2774 aa7.69□□□□□ -1.18
UBR4-203ENST00000375225 SPRR1BP22528 89 aa7.68□□□□□ -1.18
UBR4-203ENST00000375225 LRCOL1A6NCL2 159 aa7.68□□□□□ -1.18
UBR4-203ENST00000375225 H7BZZ5 65 aa7.68□□□□□ -1.18
UBR4-203ENST00000375225 Q8N9L7 120 aa7.68□□□□□ -1.18
UBR4-203ENST00000375225 TMEM254Q8TBM7 123 aa7.68□□□□□ -1.18
UBR4-203ENST00000375225 LYSTQ99698 3801 aa7.67□□□□□ -1.18
UBR4-203ENST00000375225 IGFL1Q6UW32 110 aa7.67□□□□□ -1.18
UBR4-203ENST00000375225 PHF5AQ7RTV0 110 aaKnown RBP7.67□□□□□ -1.18
UBR4-203ENST00000375225 TGP01266 2768 aa7.66□□□□□ -1.18
UBR4-203ENST00000375225 EPM2AB3EWF7 344 aa7.66□□□□□ -1.18
UBR4-203ENST00000375225 OCR1Q9BZK8 76 aa7.66□□□□□ -1.18
UBR4-203ENST00000375225 SERP1Q9Y6X1 66 aa7.66□□□□□ -1.18
UBR4-203ENST00000375225 DNAH1Q9P2D7 4330 aa7.66□□□□□ -1.18
UBR4-203ENST00000375225 Q6ZR54 194 aa7.65□□□□□ -1.18
UBR4-203ENST00000375225 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
UBR4-203ENST00000375225 SNURFQ9Y675 71 aa7.64□□□□□ -1.19
UBR4-203ENST00000375225 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
UBR4-203ENST00000375225 C1orf134Q5TEV5 83 aa7.62□□□□□ -1.19
UBR4-203ENST00000375225 VPS13DQ5THJ4 4388 aa7.62□□□□□ -1.19
UBR4-203ENST00000375225 HCG22E2RYF7 251 aa7.62□□□□□ -1.19
UBR4-203ENST00000375225 DSCR10P59022 87 aa7.62□□□□□ -1.19
UBR4-203ENST00000375225 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
UBR4-203ENST00000375225 A0A087WSZ3 146 aa7.6□□□□□ -1.19
UBR4-203ENST00000375225 A0A0U1RQV1 116 aa7.6□□□□□ -1.19
UBR4-203ENST00000375225 K7EQZ3 153 aa7.59□□□□□ -1.19
UBR4-203ENST00000375225 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
UBR4-203ENST00000375225 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
UBR4-203ENST00000375225 C5orf47Q569G3 176 aa7.58□□□□□ -1.2
UBR4-203ENST00000375225 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
UBR4-203ENST00000375225 A0A087WTM6 91 aa7.57□□□□□ -1.2
UBR4-203ENST00000375225 ALMS1Q8TCU4 4167 aa7.57□□□□□ -1.2
UBR4-203ENST00000375225 LCE6AA0A183 80 aa7.56□□□□□ -1.2
UBR4-203ENST00000375225 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
UBR4-203ENST00000375225 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
UBR4-203ENST00000375225 DNAH10Q8IVF4 4471 aa7.53□□□□□ -1.2
UBR4-203ENST00000375225 RTL8CO15255 209 aa7.53□□□□□ -1.2
UBR4-203ENST00000375225 NDUFB1O75438 58 aa7.53□□□□□ -1.2
UBR4-203ENST00000375225 MP68P56378 58 aa7.53□□□□□ -1.2
UBR4-203ENST00000375225 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.2
UBR4-203ENST00000375225 A8MWP4 228 aa7.52□□□□□ -1.2
UBR4-203ENST00000375225 DNAH6Q9C0G6 4158 aa7.52□□□□□ -1.21
UBR4-203ENST00000375225 H3BPC8 53 aa7.51□□□□□ -1.21
UBR4-203ENST00000375225 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
UBR4-203ENST00000375225 PRR15Q8IV56 129 aa7.51□□□□□ -1.21
UBR4-203ENST00000375225 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
UBR4-203ENST00000375225 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
UBR4-203ENST00000375225 OXTP01178 125 aa7.49□□□□□ -1.21
UBR4-203ENST00000375225 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
UBR4-203ENST00000375225 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
UBR4-203ENST00000375225 PLAC8Q9NZF1 115 aa7.49□□□□□ -1.21
UBR4-203ENST00000375225 IGLV5-52A0A0A0MRZ9 124 aa7.48□□□□□ -1.21
UBR4-203ENST00000375225 KMT2AQ03164 3969 aa7.48□□□□□ -1.21
UBR4-203ENST00000375225 PANO1I0J062 215 aa7.47□□□□□ -1.21
UBR4-203ENST00000375225 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
UBR4-203ENST00000375225 WFDC13Q8IUB5 93 aa7.47□□□□□ -1.21
UBR4-203ENST00000375225 IGLV9-49A0A0B4J1Y8 123 aa7.46□□□□□ -1.22
UBR4-203ENST00000375225 ZNF861PO60384 105 aa7.46□□□□□ -1.22
UBR4-203ENST00000375225 ZCCHC13Q8WW36 166 aaKnown RBP7.46□□□□□ -1.22
UBR4-203ENST00000375225 KRTAP29-1A8MX34 341 aaPredicted RBP7.45□□□□□ -1.22
UBR4-203ENST00000375225 DNAH2Q9P225 4427 aa7.44□□□□□ -1.22
UBR4-203ENST00000375225 CDK2AP2O75956 126 aa7.44□□□□□ -1.22
UBR4-203ENST00000375225 PSORS1C2Q9UIG4 136 aa7.44□□□□□ -1.22
UBR4-203ENST00000375225 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
UBR4-203ENST00000375225 Q5XG85 94 aa7.43□□□□□ -1.22
UBR4-203ENST00000375225 MOBPQ13875 183 aa7.42□□□□□ -1.22
UBR4-203ENST00000375225 TP53AIP1Q9HCN2 124 aa7.42□□□□□ -1.22
UBR4-203ENST00000375225 LINC00336Q6ZUF6 198 aa7.41□□□□□ -1.22
UBR4-203ENST00000375225 H0Y9P7 68 aa7.4□□□□□ -1.22
UBR4-203ENST00000375225 HYDINQ4G0P3 5121 aa7.39□□□□□ -1.23
UBR4-203ENST00000375225 CYP4F30PQ9H0H9 118 aa7.39□□□□□ -1.23
UBR4-203ENST00000375225 DNAH17Q9UFH2 4485 aa7.39□□□□□ -1.23
UBR4-203ENST00000375225 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
UBR4-203ENST00000375225 C4orf26Q17RF5 130 aa7.38□□□□□ -1.23
UBR4-203ENST00000375225 MMP24-AS1A0A0U1RRL7 71 aa7.37□□□□□ -1.23
UBR4-203ENST00000375225 LINC00208Q96KT6 92 aa7.37□□□□□ -1.23
UBR4-203ENST00000375225 IGLV7-43P04211 117 aa7.37□□□□□ -1.23
UBR4-203ENST00000375225 KRTAP10-2P60368 255 aa7.37□□□□□ -1.23
UBR4-203ENST00000375225 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
UBR4-203ENST00000375225 CD164Q04900 197 aa7.36□□□□□ -1.23
UBR4-203ENST00000375225 HRCT1Q6UXD1 115 aa7.36□□□□□ -1.23
UBR4-203ENST00000375225 FRAS1Q86XX4 4008 aa7.35□□□□□ -1.23
UBR4-203ENST00000375225 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.23
UBR4-203ENST00000375225 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
UBR4-203ENST00000375225 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
UBR4-203ENST00000375225 SACSQ9NZJ4 4579 aa7.33□□□□□ -1.24
UBR4-203ENST00000375225 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
UBR4-203ENST00000375225 Q96NJ1 140 aa7.33□□□□□ -1.24
UBR4-203ENST00000375225 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
UBR4-203ENST00000375225 C1orf64Q8NEQ6 169 aa7.32□□□□□ -1.24
UBR4-203ENST00000375225 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
UBR4-203ENST00000375225 V9GYY9 64 aa7.3□□□□□ -1.24
UBR4-203ENST00000375225 IGHV6-1A0A0B4J1U7 121 aa7.29□□□□□ -1.24
UBR4-203ENST00000375225 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms