RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 PANO1I0J062 215 aa5.39□□□□□ -1.55
ABCA1-202ENST00000374736 LINC00612Q8N6U2 182 aa5.39□□□□□ -1.55
ABCA1-202ENST00000374736 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
ABCA1-202ENST00000374736 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
ABCA1-202ENST00000374736 Q96NJ1 140 aa5.38□□□□□ -1.55
ABCA1-202ENST00000374736 A0A1W2PPR1 153 aa5.37□□□□□ -1.55
ABCA1-202ENST00000374736 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
ABCA1-202ENST00000374736 PLAC8Q9NZF1 115 aa5.35□□□□□ -1.55
ABCA1-202ENST00000374736 A8MU10 97 aa5.34□□□□□ -1.55
ABCA1-202ENST00000374736 MAP1AP78559 2803 aaPredicted RBP5.34□□□□□ -1.55
ABCA1-202ENST00000374736 NSD1Q96L73 2696 aaPredicted RBP5.34□□□□□ -1.56
ABCA1-202ENST00000374736 LINC00304Q8N9R0 145 aa5.33□□□□□ -1.56
ABCA1-202ENST00000374736 MAPK1IP1LQ8NDC0 245 aa5.33□□□□□ -1.56
ABCA1-202ENST00000374736 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
ABCA1-202ENST00000374736 C10orf142B7Z368 130 aa5.32□□□□□ -1.56
ABCA1-202ENST00000374736 FAM168BA1KXE4 195 aa5.3□□□□□ -1.56
ABCA1-202ENST00000374736 SPRR1BP22528 89 aa5.3□□□□□ -1.56
ABCA1-202ENST00000374736 SPRR1AP35321 89 aa5.3□□□□□ -1.56
ABCA1-202ENST00000374736 Q8N1X5 172 aa5.3□□□□□ -1.56
ABCA1-202ENST00000374736 C10orf99Q6UWK7 81 aa5.29□□□□□ -1.56
ABCA1-202ENST00000374736 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
ABCA1-202ENST00000374736 STAB1Q9NY15 2570 aa5.27□□□□□ -1.57
ABCA1-202ENST00000374736 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
ABCA1-202ENST00000374736 NBDYA0A0U1RRE5 68 aa5.26□□□□□ -1.57
ABCA1-202ENST00000374736 KRTAP26-1Q6PEX3 210 aa5.26□□□□□ -1.57
ABCA1-202ENST00000374736 SETXQ7Z333 2677 aaKnown RBP5.24□□□□□ -1.57
ABCA1-202ENST00000374736 MAST4O15021 2626 aa5.23□□□□□ -1.57
ABCA1-202ENST00000374736 APCP25054 2843 aa5.23□□□□□ -1.57
ABCA1-202ENST00000374736 R4GN34 69 aa5.22□□□□□ -1.57
ABCA1-202ENST00000374736 KRTAP4-16G5E9R7 235 aaPredicted RBP5.22□□□□□ -1.57
ABCA1-202ENST00000374736 M0QZ58 72 aa5.2□□□□□ -1.58
ABCA1-202ENST00000374736 SRRM2Q9UQ35 2752 aaKnown RBP5.2□□□□□ -1.58
ABCA1-202ENST00000374736 P0C880 135 aa5.19□□□□□ -1.58
ABCA1-202ENST00000374736 LRBAP50851 2863 aa5.19□□□□□ -1.58
ABCA1-202ENST00000374736 ZFHX3Q15911 3703 aa5.19□□□□□ -1.58
ABCA1-202ENST00000374736 GIG44P09565 113 aaPredicted RBP5.19□□□□□ -1.58
ABCA1-202ENST00000374736 FLNAP21333 2647 aaKnown RBP5.18□□□□□ -1.58
ABCA1-202ENST00000374736 IGSF10Q6WRI0 2623 aa5.16□□□□□ -1.58
ABCA1-202ENST00000374736 A0A087WTM6 91 aa5.15□□□□□ -1.59
ABCA1-202ENST00000374736 ITPR3Q14573 2671 aa5.15□□□□□ -1.59
ABCA1-202ENST00000374736 S4R3F8 94 aa5.14□□□□□ -1.59
ABCA1-202ENST00000374736 INE1O15225 51 aa5.13□□□□□ -1.59
ABCA1-202ENST00000374736 TEX15Q9BXT5 2789 aa5.12□□□□□ -1.59
ABCA1-202ENST00000374736 HIVEP1P15822 2718 aa5.08□□□□□ -1.6
ABCA1-202ENST00000374736 KRTAP24-1Q3LI83 254 aa5.06□□□□□ -1.6
ABCA1-202ENST00000374736 ITPR2Q14571 2701 aa5.05□□□□□ -1.6
ABCA1-202ENST00000374736 ZNF292O60281 2723 aa5.04□□□□□ -1.6
ABCA1-202ENST00000374736 CHD9Q3L8U1 2897 aa5.03□□□□□ -1.6
ABCA1-202ENST00000374736 NBEAL2Q6ZNJ1 2754 aa5.03□□□□□ -1.6
ABCA1-202ENST00000374736 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
ABCA1-202ENST00000374736 A0A0C4DFX4 3053 aa5□□□□□ -1.61
ABCA1-202ENST00000374736 H0YAA0 97 aa4.99□□□□□ -1.61
ABCA1-202ENST00000374736 FLNBO75369 2602 aaKnown RBP4.98□□□□□ -1.61
ABCA1-202ENST00000374736 DSPP15924 2871 aaKnown RBP4.98□□□□□ -1.61
ABCA1-202ENST00000374736 Q6ZSA8 131 aa4.97□□□□□ -1.61
ABCA1-202ENST00000374736 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
ABCA1-202ENST00000374736 CENPFP49454 3210 aa4.97□□□□□ -1.61
ABCA1-202ENST00000374736 MGAQ8IWI9 3026 aa4.97□□□□□ -1.61
ABCA1-202ENST00000374736 TGP01266 2768 aa4.95□□□□□ -1.62
ABCA1-202ENST00000374736 WWC2-AS2Q96NR7 200 aa4.92□□□□□ -1.62
ABCA1-202ENST00000374736 TNP1P09430 55 aa4.92□□□□□ -1.62
ABCA1-202ENST00000374736 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.63
ABCA1-202ENST00000374736 FLNCQ14315 2725 aa4.9□□□□□ -1.63
ABCA1-202ENST00000374736 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
ABCA1-202ENST00000374736 K7EIL1 84 aa4.89□□□□□ -1.63
ABCA1-202ENST00000374736 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
ABCA1-202ENST00000374736 TENM3Q9P273 2699 aa4.81□□□□□ -1.64
ABCA1-202ENST00000374736 PDZD2O15018 2839 aa4.8□□□□□ -1.64
ABCA1-202ENST00000374736 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
ABCA1-202ENST00000374736 Q5VSD8 79 aa4.75□□□□□ -1.65
ABCA1-202ENST00000374736 TRANK1O15050 2925 aa4.75□□□□□ -1.65
ABCA1-202ENST00000374736 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
ABCA1-202ENST00000374736 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
ABCA1-202ENST00000374736 DNAH12Q6ZR08 3092 aa4.72□□□□□ -1.65
ABCA1-202ENST00000374736 CHD7Q9P2D1 2997 aa4.71□□□□□ -1.65
ABCA1-202ENST00000374736 KALRNO60229 2985 aa4.69□□□□□ -1.66
ABCA1-202ENST00000374736 SMR3AQ99954 134 aa4.69□□□□□ -1.66
ABCA1-202ENST00000374736 NBEAQ8NFP9 2946 aa4.66□□□□□ -1.66
ABCA1-202ENST00000374736 NF1P21359 2839 aa4.64□□□□□ -1.67
ABCA1-202ENST00000374736 SRCAPQ6ZRS2 3230 aa4.64□□□□□ -1.67
ABCA1-202ENST00000374736 FRYLO94915 3013 aa4.64□□□□□ -1.67
ABCA1-202ENST00000374736 PCNTO95613 3336 aa4.62□□□□□ -1.67
ABCA1-202ENST00000374736 TPRXLQ17RH7 258 aa4.62□□□□□ -1.67
ABCA1-202ENST00000374736 TENM1Q9UKZ4 2725 aa4.62□□□□□ -1.67
ABCA1-202ENST00000374736 KRTAP13-1Q8IUC0 172 aa4.6□□□□□ -1.67
ABCA1-202ENST00000374736 TACC2O95359 2948 aa4.6□□□□□ -1.67
ABCA1-202ENST00000374736 CELSR2Q9HCU4 2923 aa4.6□□□□□ -1.67
ABCA1-202ENST00000374736 KRTAP13-3Q3SY46 172 aa4.59□□□□□ -1.67
ABCA1-202ENST00000374736 CFAP54Q96N23 3096 aa4.59□□□□□ -1.67
ABCA1-202ENST00000374736 ASH1LQ9NR48 2969 aaKnown RBP4.59□□□□□ -1.68
ABCA1-202ENST00000374736 C5orf42Q9H799 3197 aa4.57□□□□□ -1.68
ABCA1-202ENST00000374736 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
ABCA1-202ENST00000374736 EP400Q96L91 3159 aa4.53□□□□□ -1.68
ABCA1-202ENST00000374736 KRTAP10-8P60410 259 aa4.53□□□□□ -1.68
ABCA1-202ENST00000374736 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
ABCA1-202ENST00000374736 FRYQ5TBA9 3013 aa4.53□□□□□ -1.68
ABCA1-202ENST00000374736 TNRC18O15417 2968 aaPredicted RBP4.52□□□□□ -1.69
ABCA1-202ENST00000374736 DCHS2Q6V1P9 2916 aa4.51□□□□□ -1.69
ABCA1-202ENST00000374736 ZANQ9Y493 2812 aa4.51□□□□□ -1.69
ABCA1-202ENST00000374736 CRYBG3Q68DQ2 2970 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms