RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 C5orf47Q569G3 176 aa8.64□□□□□ -1.03
CLIC4-201ENST00000374379 NDUFC1O43677 76 aa8.63□□□□□ -1.03
CLIC4-201ENST00000374379 TENM2Q9NT68 2774 aa8.62□□□□□ -1.03
CLIC4-201ENST00000374379 BCE1O60756 84 aa8.61□□□□□ -1.03
CLIC4-201ENST00000374379 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
CLIC4-201ENST00000374379 A0A087WTM6 91 aa8.6□□□□□ -1.03
CLIC4-201ENST00000374379 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
CLIC4-201ENST00000374379 RETNLBQ9BQ08 111 aa8.6□□□□□ -1.03
CLIC4-201ENST00000374379 BRK1Q8WUW1 75 aa8.58□□□□□ -1.04
CLIC4-201ENST00000374379 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
CLIC4-201ENST00000374379 H0Y9P7 68 aa8.56□□□□□ -1.04
CLIC4-201ENST00000374379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.56□□□□□ -1.04
CLIC4-201ENST00000374379 CYSTM1Q9H1C7 97 aa8.55□□□□□ -1.04
CLIC4-201ENST00000374379 ANK3Q12955 4377 aaKnown RBP8.55□□□□□ -1.04
CLIC4-201ENST00000374379 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
CLIC4-201ENST00000374379 SERP1Q9Y6X1 66 aa8.54□□□□□ -1.04
CLIC4-201ENST00000374379 IGLV5-37A0A075B6J1 123 aa8.53□□□□□ -1.04
CLIC4-201ENST00000374379 PSORS1C2Q9UIG4 136 aa8.52□□□□□ -1.05
CLIC4-201ENST00000374379 CHKB-CPT1BH3BT56 60 aa8.5□□□□□ -1.05
CLIC4-201ENST00000374379 SMIM26A0A096LP01 95 aa8.5□□□□□ -1.05
CLIC4-201ENST00000374379 A0A1B0GW54 56 aa8.49□□□□□ -1.05
CLIC4-201ENST00000374379 hDV103S1A0JD37 113 aa8.49□□□□□ -1.05
CLIC4-201ENST00000374379 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
CLIC4-201ENST00000374379 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
CLIC4-201ENST00000374379 C1orf64Q8NEQ6 169 aa8.49□□□□□ -1.05
CLIC4-201ENST00000374379 C4orf26Q17RF5 130 aa8.48□□□□□ -1.05
CLIC4-201ENST00000374379 SPRR1AP35321 89 aa8.48□□□□□ -1.05
CLIC4-201ENST00000374379 TNP2Q05952 138 aa8.48□□□□□ -1.05
CLIC4-201ENST00000374379 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
CLIC4-201ENST00000374379 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
CLIC4-201ENST00000374379 H7BZZ5 65 aa8.47□□□□□ -1.05
CLIC4-201ENST00000374379 PANO1I0J062 215 aa8.47□□□□□ -1.05
CLIC4-201ENST00000374379 PSPHP1O15172 72 aa8.45□□□□□ -1.06
CLIC4-201ENST00000374379 TGP01266 2768 aa8.45□□□□□ -1.06
CLIC4-201ENST00000374379 ZNF861PO60384 105 aa8.44□□□□□ -1.06
CLIC4-201ENST00000374379 DSCR10P59022 87 aa8.44□□□□□ -1.06
CLIC4-201ENST00000374379 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
CLIC4-201ENST00000374379 A8MWP4 228 aa8.43□□□□□ -1.06
CLIC4-201ENST00000374379 KRTAP7-1Q8IUC3 87 aa8.43□□□□□ -1.06
CLIC4-201ENST00000374379 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
CLIC4-201ENST00000374379 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
CLIC4-201ENST00000374379 KRTAP4-16G5E9R7 235 aaPredicted RBP8.39□□□□□ -1.07
CLIC4-201ENST00000374379 RPS28P62857 69 aaKnown RBP8.39□□□□□ -1.07
CLIC4-201ENST00000374379 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
CLIC4-201ENST00000374379 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
CLIC4-201ENST00000374379 TRAV22A0A0B4J277 110 aa8.38□□□□□ -1.07
CLIC4-201ENST00000374379 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
CLIC4-201ENST00000374379 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
CLIC4-201ENST00000374379 IGLV7-43P04211 117 aa8.35□□□□□ -1.07
CLIC4-201ENST00000374379 IGKV2D-30A0A075B6S6 120 aa8.33□□□□□ -1.08
CLIC4-201ENST00000374379 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
CLIC4-201ENST00000374379 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
CLIC4-201ENST00000374379 PRR15LQ9BU68 103 aa8.32□□□□□ -1.08
CLIC4-201ENST00000374379 C8orf17Q9NRJ1 99 aa8.32□□□□□ -1.08
CLIC4-201ENST00000374379 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
CLIC4-201ENST00000374379 A6NED7 52 aa8.3□□□□□ -1.08
CLIC4-201ENST00000374379 AKAP9Q99996 3911 aa8.3□□□□□ -1.08
CLIC4-201ENST00000374379 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
CLIC4-201ENST00000374379 SPINK1P00995 79 aa8.28□□□□□ -1.08
CLIC4-201ENST00000374379 A0A1B0GVX0 72 aa8.27□□□□□ -1.08
CLIC4-201ENST00000374379 LINC00313P59037 77 aa8.27□□□□□ -1.09
CLIC4-201ENST00000374379 TP53AIP1Q9HCN2 124 aa8.27□□□□□ -1.09
CLIC4-201ENST00000374379 KRTAP10-2P60368 255 aa8.26□□□□□ -1.09
CLIC4-201ENST00000374379 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
CLIC4-201ENST00000374379 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
CLIC4-201ENST00000374379 V9GYY9 64 aa8.23□□□□□ -1.09
CLIC4-201ENST00000374379 Q6ZRN7 208 aaPredicted RBP8.23□□□□□ -1.09
CLIC4-201ENST00000374379 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
CLIC4-201ENST00000374379 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.09
CLIC4-201ENST00000374379 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
CLIC4-201ENST00000374379 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.1
CLIC4-201ENST00000374379 OXTP01178 125 aa8.2□□□□□ -1.1
CLIC4-201ENST00000374379 Q96NJ1 140 aa8.2□□□□□ -1.1
CLIC4-201ENST00000374379 SPRR1BP22528 89 aa8.2□□□□□ -1.1
CLIC4-201ENST00000374379 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
CLIC4-201ENST00000374379 IGLV8-61A0A075B6I0 122 aa8.18□□□□□ -1.1
CLIC4-201ENST00000374379 H3BPC8 53 aa8.18□□□□□ -1.1
CLIC4-201ENST00000374379 A8MUN3 132 aa8.18□□□□□ -1.1
CLIC4-201ENST00000374379 Q6ZR54 194 aa8.17□□□□□ -1.1
CLIC4-201ENST00000374379 MMP24-AS1A0A0U1RRL7 71 aa8.16□□□□□ -1.1
CLIC4-201ENST00000374379 LINC00336Q6ZUF6 198 aa8.16□□□□□ -1.1
CLIC4-201ENST00000374379 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
CLIC4-201ENST00000374379 FAM229BQ4G0N7 80 aa8.15□□□□□ -1.1
CLIC4-201ENST00000374379 COA5Q86WW8 74 aa8.15□□□□□ -1.1
CLIC4-201ENST00000374379 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
CLIC4-201ENST00000374379 CSMD3Q7Z407 3707 aa8.13□□□□□ -1.11
CLIC4-201ENST00000374379 SEC61GP60059 68 aa8.12□□□□□ -1.11
CLIC4-201ENST00000374379 PRR26Q8N8Z3 221 aa8.11□□□□□ -1.11
CLIC4-201ENST00000374379 C7orf65Q6ZTY9 151 aa8.11□□□□□ -1.11
CLIC4-201ENST00000374379 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
CLIC4-201ENST00000374379 LINC00304Q8N9R0 145 aa8.1□□□□□ -1.11
CLIC4-201ENST00000374379 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
CLIC4-201ENST00000374379 C8orf87E5RJ46 101 aa8.09□□□□□ -1.11
CLIC4-201ENST00000374379 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
CLIC4-201ENST00000374379 PMAIP1Q13794 54 aa8.09□□□□□ -1.11
CLIC4-201ENST00000374379 PRO0628Q9UI54 55 aa8.09□□□□□ -1.11
CLIC4-201ENST00000374379 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
CLIC4-201ENST00000374379 FP248Q71RG6 208 aaPredicted RBP8.07□□□□□ -1.12
CLIC4-201ENST00000374379 FBN3Q75N90 2809 aa8.07□□□□□ -1.12
CLIC4-201ENST00000374379 ACYP2P14621 99 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms