RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 OCR1Q9BZK8 76 aa8.44□□□□□ -1.06
A1CF-204ENST00000373997 TNP2Q05952 138 aa8.43□□□□□ -1.06
A1CF-204ENST00000373997 Q9BRP9 147 aa8.42□□□□□ -1.06
A1CF-204ENST00000373997 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
A1CF-204ENST00000373997 A0A096LNI7 61 aa8.41□□□□□ -1.06
A1CF-204ENST00000373997 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
A1CF-204ENST00000373997 RPL37AP8A6NKH3 93 aa8.41□□□□□ -1.06
A1CF-204ENST00000373997 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
A1CF-204ENST00000373997 Q8NBF4 154 aa8.41□□□□□ -1.06
A1CF-204ENST00000373997 SMIM26A0A096LP01 95 aa8.4□□□□□ -1.06
A1CF-204ENST00000373997 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.06
A1CF-204ENST00000373997 A0A0U1RQV1 116 aa8.39□□□□□ -1.07
A1CF-204ENST00000373997 SPRR4Q96PI1 79 aa8.39□□□□□ -1.07
A1CF-204ENST00000373997 PRO0628Q9UI54 55 aa8.39□□□□□ -1.07
A1CF-204ENST00000373997 A0A087WTM6 91 aa8.38□□□□□ -1.07
A1CF-204ENST00000373997 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
A1CF-204ENST00000373997 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
A1CF-204ENST00000373997 ALMS1Q8TCU4 4167 aa8.38□□□□□ -1.07
A1CF-204ENST00000373997 KRTAP7-1Q8IUC3 87 aa8.38□□□□□ -1.07
A1CF-204ENST00000373997 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
A1CF-204ENST00000373997 CHTF8P0CG12 524 aa8.36□□□□□ -1.07
A1CF-204ENST00000373997 C9orf163Q8N9P6 203 aa8.36□□□□□ -1.07
A1CF-204ENST00000373997 ST20-AS1Q8NBB2 130 aa8.36□□□□□ -1.07
A1CF-204ENST00000373997 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
A1CF-204ENST00000373997 UBE2BP63146 152 aa8.34□□□□□ -1.07
A1CF-204ENST00000373997 DNAH2Q9P225 4427 aa8.34□□□□□ -1.07
A1CF-204ENST00000373997 REG3GQ6UW15 175 aa8.33□□□□□ -1.08
A1CF-204ENST00000373997 LCE6AA0A183 80 aa8.33□□□□□ -1.08
A1CF-204ENST00000373997 A0A1W2PNN7 141 aa8.33□□□□□ -1.08
A1CF-204ENST00000373997 SMIM29Q86T20 159 aa8.33□□□□□ -1.08
A1CF-204ENST00000373997 FP248Q71RG6 208 aaPredicted RBP8.32□□□□□ -1.08
A1CF-204ENST00000373997 RTL8CO15255 209 aa8.31□□□□□ -1.08
A1CF-204ENST00000373997 PKIGQ9Y2B9 76 aa8.31□□□□□ -1.08
A1CF-204ENST00000373997 HECTD4Q9Y4D8 3996 aa8.31□□□□□ -1.08
A1CF-204ENST00000373997 DSCR10P59022 87 aa8.3□□□□□ -1.08
A1CF-204ENST00000373997 HIGD2AQ9BW72 106 aa8.3□□□□□ -1.08
A1CF-204ENST00000373997 PANO1I0J062 215 aa8.29□□□□□ -1.08
A1CF-204ENST00000373997 FAM30AQ9NZY2 134 aa8.29□□□□□ -1.08
A1CF-204ENST00000373997 FRAS1Q86XX4 4008 aa8.28□□□□□ -1.08
A1CF-204ENST00000373997 IGLV5-52A0A0A0MRZ9 124 aa8.27□□□□□ -1.09
A1CF-204ENST00000373997 PHF5AQ7RTV0 110 aaKnown RBP8.27□□□□□ -1.09
A1CF-204ENST00000373997 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
A1CF-204ENST00000373997 K7EQZ3 153 aa8.26□□□□□ -1.09
A1CF-204ENST00000373997 C1orf195Q5TG92 126 aa8.26□□□□□ -1.09
A1CF-204ENST00000373997 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
A1CF-204ENST00000373997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
A1CF-204ENST00000373997 DNAH17Q9UFH2 4485 aa8.26□□□□□ -1.09
A1CF-204ENST00000373997 H3BS24 57 aa8.26□□□□□ -1.09
A1CF-204ENST00000373997 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
A1CF-204ENST00000373997 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
A1CF-204ENST00000373997 IGFL1Q6UW32 110 aa8.24□□□□□ -1.09
A1CF-204ENST00000373997 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
A1CF-204ENST00000373997 CD164Q04900 197 aa8.24□□□□□ -1.09
A1CF-204ENST00000373997 ZCCHC13Q8WW36 166 aaKnown RBP8.24□□□□□ -1.09
A1CF-204ENST00000373997 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
A1CF-204ENST00000373997 KRTAP10-2P60368 255 aa8.2□□□□□ -1.1
A1CF-204ENST00000373997 PRLHP81277 87 aa8.2□□□□□ -1.1
A1CF-204ENST00000373997 FAM229BQ4G0N7 80 aa8.2□□□□□ -1.1
A1CF-204ENST00000373997 H0Y9J4 135 aa8.18□□□□□ -1.1
A1CF-204ENST00000373997 A0A087WSZ3 146 aa8.17□□□□□ -1.1
A1CF-204ENST00000373997 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
A1CF-204ENST00000373997 SPRR1BP22528 89 aa8.17□□□□□ -1.1
A1CF-204ENST00000373997 UBE2AP49459 152 aa8.17□□□□□ -1.1
A1CF-204ENST00000373997 A0A0G2JQZ4 141 aa8.15□□□□□ -1.1
A1CF-204ENST00000373997 NDUFB1O75438 58 aa8.15□□□□□ -1.1
A1CF-204ENST00000373997 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
A1CF-204ENST00000373997 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
A1CF-204ENST00000373997 DNAH11Q96DT5 4516 aa8.14□□□□□ -1.11
A1CF-204ENST00000373997 MPLKIPQ8TAP9 179 aa8.14□□□□□ -1.11
A1CF-204ENST00000373997 MP68P56378 58 aa8.13□□□□□ -1.11
A1CF-204ENST00000373997 PLAC8Q9NZF1 115 aa8.13□□□□□ -1.11
A1CF-204ENST00000373997 PKD1P98161 4303 aa8.12□□□□□ -1.11
A1CF-204ENST00000373997 DNAH5Q8TE73 4624 aa8.12□□□□□ -1.11
A1CF-204ENST00000373997 FAT2Q9NYQ8 4349 aa8.12□□□□□ -1.11
A1CF-204ENST00000373997 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
A1CF-204ENST00000373997 DEFB116Q30KQ4 102 aa8.12□□□□□ -1.11
A1CF-204ENST00000373997 WFDC13Q8IUB5 93 aa8.12□□□□□ -1.11
A1CF-204ENST00000373997 C1orf64Q8NEQ6 169 aa8.12□□□□□ -1.11
A1CF-204ENST00000373997 H3BPC8 53 aa8.1□□□□□ -1.11
A1CF-204ENST00000373997 PRR15Q8IV56 129 aa8.09□□□□□ -1.11
A1CF-204ENST00000373997 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
A1CF-204ENST00000373997 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
A1CF-204ENST00000373997 A8MWP4 228 aa8.08□□□□□ -1.12
A1CF-204ENST00000373997 Q1T7F1 81 aa8.08□□□□□ -1.12
A1CF-204ENST00000373997 LINC00472Q9H8W2 130 aa8.08□□□□□ -1.12
A1CF-204ENST00000373997 DNAH8Q96JB1 4490 aa8.08□□□□□ -1.12
A1CF-204ENST00000373997 TRAV22A0A0B4J277 110 aa8.08□□□□□ -1.12
A1CF-204ENST00000373997 RPL37AP61513 92 aaKnown RBP8.08□□□□□ -1.12
A1CF-204ENST00000373997 CASC2Q6XLA1 102 aa8.08□□□□□ -1.12
A1CF-204ENST00000373997 BRK1Q8WUW1 75 aa8.07□□□□□ -1.12
A1CF-204ENST00000373997 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
A1CF-204ENST00000373997 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
A1CF-204ENST00000373997 CIRBP-AS1Q8TBR5 109 aa8.06□□□□□ -1.12
A1CF-204ENST00000373997 A0A0A0MQY5 61 aa8.05□□□□□ -1.12
A1CF-204ENST00000373997 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
A1CF-204ENST00000373997 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
A1CF-204ENST00000373997 SPANXA2-OT1Q8N9U9 137 aa8.04□□□□□ -1.12
A1CF-204ENST00000373997 H0Y9P7 68 aa8.03□□□□□ -1.12
A1CF-204ENST00000373997 Q6ZSA8 131 aa8.03□□□□□ -1.12
A1CF-204ENST00000373997 PMAIP1Q13794 54 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms