RNA–Protein interactions for RNA: ENST00000373691.4

CXCR3-201, Transcript of C-X-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CXCR3, Length 1,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3-201ENST00000373691 NUPR2A6NF83 97 aa12.64□□□□□ -0.39
CXCR3-201ENST00000373691 NBEAL1Q6ZS30 2694 aa12.64□□□□□ -0.39
CXCR3-201ENST00000373691 A0A0G2JQZ4 141 aa12.63□□□□□ -0.39
CXCR3-201ENST00000373691 LINC00474Q9P2X8 69 aa12.63□□□□□ -0.39
CXCR3-201ENST00000373691 Q6ZRN7 208 aaPredicted RBP12.62□□□□□ -0.39
CXCR3-201ENST00000373691 FAM30AQ9NZY2 134 aa12.61□□□□□ -0.39
CXCR3-201ENST00000373691 Q5XG85 94 aa12.6□□□□□ -0.39
CXCR3-201ENST00000373691 A0A087WSZ3 146 aa12.58□□□□□ -0.4
CXCR3-201ENST00000373691 HCG22E2RYF7 251 aa12.58□□□□□ -0.4
CXCR3-201ENST00000373691 MDFIQ99750 246 aa12.58□□□□□ -0.4
CXCR3-201ENST00000373691 DYNC2H1Q8NCM8 4307 aaKnown RBP12.57□□□□□ -0.4
CXCR3-201ENST00000373691 KRTAP13-1Q8IUC0 172 aa12.54□□□□□ -0.4
CXCR3-201ENST00000373691 DNAH9Q9NYC9 4486 aa12.53□□□□□ -0.4
CXCR3-201ENST00000373691 PANO1I0J062 215 aa12.52□□□□□ -0.41
CXCR3-201ENST00000373691 C5orf47Q569G3 176 aa12.5□□□□□ -0.41
CXCR3-201ENST00000373691 SMIM26A0A096LP01 95 aa12.49□□□□□ -0.41
CXCR3-201ENST00000373691 SPACA4Q8TDM5 124 aa12.49□□□□□ -0.41
CXCR3-201ENST00000373691 ZCCHC13Q8WW36 166 aaKnown RBP12.49□□□□□ -0.41
CXCR3-201ENST00000373691 C4orf26Q17RF5 130 aa12.48□□□□□ -0.41
CXCR3-201ENST00000373691 DEFB116Q30KQ4 102 aa12.48□□□□□ -0.41
CXCR3-201ENST00000373691 DNAH10Q8IVF4 4471 aa12.48□□□□□ -0.41
CXCR3-201ENST00000373691 MGAM2Q2M2H8 2515 aa12.48□□□□□ -0.41
CXCR3-201ENST00000373691 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
CXCR3-201ENST00000373691 COL7A1Q02388 2944 aa12.45□□□□□ -0.42
CXCR3-201ENST00000373691 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.44□□□□□ -0.42
CXCR3-201ENST00000373691 KRTAP29-1A8MX34 341 aaPredicted RBP12.44□□□□□ -0.42
CXCR3-201ENST00000373691 LINC00472Q9H8W2 130 aa12.44□□□□□ -0.42
CXCR3-201ENST00000373691 A0A087WTM6 91 aa12.43□□□□□ -0.42
CXCR3-201ENST00000373691 RPL37AP61513 92 aaKnown RBP12.42□□□□□ -0.42
CXCR3-201ENST00000373691 WFDC13Q8IUB5 93 aa12.42□□□□□ -0.42
CXCR3-201ENST00000373691 HRCT1Q6UXD1 115 aa12.42□□□□□ -0.42
CXCR3-201ENST00000373691 A8MWP4 228 aa12.41□□□□□ -0.42
CXCR3-201ENST00000373691 PRR15Q8IV56 129 aa12.41□□□□□ -0.42
CXCR3-201ENST00000373691 FP248Q71RG6 208 aaPredicted RBP12.4□□□□□ -0.42
CXCR3-201ENST00000373691 DNHD1Q96M86 4753 aa12.4□□□□□ -0.43
CXCR3-201ENST00000373691 LINC00483Q53H64 154 aa12.37□□□□□ -0.43
CXCR3-201ENST00000373691 CASC2Q6XLA1 102 aa12.36□□□□□ -0.43
CXCR3-201ENST00000373691 LYSTQ99698 3801 aa12.36□□□□□ -0.43
CXCR3-201ENST00000373691 RTL8CO15255 209 aa12.34□□□□□ -0.43
CXCR3-201ENST00000373691 Q6ZR54 194 aa12.34□□□□□ -0.43
CXCR3-201ENST00000373691 MP68P56378 58 aa12.33□□□□□ -0.44
CXCR3-201ENST00000373691 ZNF706Q9Y5V0 76 aaPredicted RBP12.33□□□□□ -0.44
CXCR3-201ENST00000373691 FAM229BQ4G0N7 80 aa12.3□□□□□ -0.44
CXCR3-201ENST00000373691 NDUFB1O75438 58 aa12.29□□□□□ -0.44
CXCR3-201ENST00000373691 PLAC8Q9NZF1 115 aa12.29□□□□□ -0.44
CXCR3-201ENST00000373691 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
CXCR3-201ENST00000373691 IGLV9-49A0A0B4J1Y8 123 aa12.29□□□□□ -0.44
CXCR3-201ENST00000373691 H3BPC8 53 aa12.29□□□□□ -0.44
CXCR3-201ENST00000373691 hDV103S1A0JD37 113 aa12.27□□□□□ -0.44
CXCR3-201ENST00000373691 CYP4F30PQ9H0H9 118 aa12.27□□□□□ -0.44
CXCR3-201ENST00000373691 PLECQ15149 4684 aaKnown RBP12.27□□□□□ -0.45
CXCR3-201ENST00000373691 MMP24-AS1A0A0U1RRL7 71 aa12.27□□□□□ -0.45
CXCR3-201ENST00000373691 PSORS1C2Q9UIG4 136 aa12.27□□□□□ -0.45
CXCR3-201ENST00000373691 CSMD3Q7Z407 3707 aa12.26□□□□□ -0.45
CXCR3-201ENST00000373691 KRTAP21-3Q3LHN1 58 aa12.26□□□□□ -0.45
CXCR3-201ENST00000373691 Q96NJ1 140 aa12.26□□□□□ -0.45
CXCR3-201ENST00000373691 DNAH7Q8WXX0 4024 aa12.26□□□□□ -0.45
CXCR3-201ENST00000373691 TRAV22A0A0B4J277 110 aa12.25□□□□□ -0.45
CXCR3-201ENST00000373691 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
CXCR3-201ENST00000373691 H0Y9P7 68 aa12.24□□□□□ -0.45
CXCR3-201ENST00000373691 WWC2-AS2Q96NR7 200 aa12.24□□□□□ -0.45
CXCR3-201ENST00000373691 LINC00208Q96KT6 92 aa12.23□□□□□ -0.45
CXCR3-201ENST00000373691 ZNF861PO60384 105 aa12.21□□□□□ -0.45
CXCR3-201ENST00000373691 C1orf64Q8NEQ6 169 aa12.21□□□□□ -0.46
CXCR3-201ENST00000373691 ASB16-AS1Q495Z4 193 aa12.19□□□□□ -0.46
CXCR3-201ENST00000373691 MOBPQ13875 183 aa12.18□□□□□ -0.46
CXCR3-201ENST00000373691 C1orf134Q5TEV5 83 aa12.17□□□□□ -0.46
CXCR3-201ENST00000373691 SPANXA2-OT1Q8N9U9 137 aa12.15□□□□□ -0.46
CXCR3-201ENST00000373691 MPLKIPQ8TAP9 179 aa12.14□□□□□ -0.47
CXCR3-201ENST00000373691 STARD9Q9P2P6 4700 aa12.14□□□□□ -0.47
CXCR3-201ENST00000373691 C8orf17Q9NRJ1 99 aa12.13□□□□□ -0.47
CXCR3-201ENST00000373691 TENM2Q9NT68 2774 aa12.13□□□□□ -0.47
CXCR3-201ENST00000373691 LINC00336Q6ZUF6 198 aa12.12□□□□□ -0.47
CXCR3-201ENST00000373691 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
CXCR3-201ENST00000373691 PRR4Q16378 134 aa12.11□□□□□ -0.47
CXCR3-201ENST00000373691 SRRM2Q9UQ35 2752 aaKnown RBP12.11□□□□□ -0.47
CXCR3-201ENST00000373691 TP53AIP1Q9HCN2 124 aa12.1□□□□□ -0.47
CXCR3-201ENST00000373691 IGLV7-43P04211 117 aa12.09□□□□□ -0.47
CXCR3-201ENST00000373691 ANAPC11Q9NYG5 84 aa12.09□□□□□ -0.47
CXCR3-201ENST00000373691 PRKDCP78527 4128 aaKnown RBP12.07□□□□□ -0.48
CXCR3-201ENST00000373691 Q1T7F1 81 aa12.06□□□□□ -0.48
CXCR3-201ENST00000373691 DNAH17Q9UFH2 4485 aa12.06□□□□□ -0.48
CXCR3-201ENST00000373691 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
CXCR3-201ENST00000373691 PRO0628Q9UI54 55 aa12.06□□□□□ -0.48
CXCR3-201ENST00000373691 IGHV6-1A0A0B4J1U7 121 aa12.04□□□□□ -0.48
CXCR3-201ENST00000373691 LY6G6CO95867 125 aa12.02□□□□□ -0.49
CXCR3-201ENST00000373691 MRPL34Q9BQ48 92 aaKnown RBP12□□□□□ -0.49
CXCR3-201ENST00000373691 HECTD4Q9Y4D8 3996 aa11.99□□□□□ -0.49
CXCR3-201ENST00000373691 CD164Q04900 197 aa11.99□□□□□ -0.49
CXCR3-201ENST00000373691 MEGF8Q7Z7M0 2845 aa11.97□□□□□ -0.49
CXCR3-201ENST00000373691 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
CXCR3-201ENST00000373691 SSBP3-AS1Q7Z2R9 100 aa11.95□□□□□ -0.5
CXCR3-201ENST00000373691 NDUFS5O43920 106 aa11.93□□□□□ -0.5
CXCR3-201ENST00000373691 CIRBP-AS1Q8TBR5 109 aa11.93□□□□□ -0.5
CXCR3-201ENST00000373691 V9GYY9 64 aa11.93□□□□□ -0.5
CXCR3-201ENST00000373691 A0A087X002 238 aa11.92□□□□□ -0.5
CXCR3-201ENST00000373691 NOTCH2NLQ7Z3S9 236 aa11.92□□□□□ -0.5
CXCR3-201ENST00000373691 KRTAP10-2P60368 255 aa11.91□□□□□ -0.5
CXCR3-201ENST00000373691 BRK1Q8WUW1 75 aa11.91□□□□□ -0.5
CXCR3-201ENST00000373691 DNAH8Q96JB1 4490 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms