RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 Q8N9P0 234 aaPredicted RBP10.22□□□□□ -0.77
PBX3-204ENST00000373489 A0A087WSZ3 146 aa10.21□□□□□ -0.78
PBX3-204ENST00000373489 CD164Q04900 197 aa10.2□□□□□ -0.78
PBX3-204ENST00000373489 CMYA5Q8N3K9 4069 aa10.2□□□□□ -0.78
PBX3-204ENST00000373489 H0Y9P7 68 aa10.19□□□□□ -0.78
PBX3-204ENST00000373489 IGFL1Q6UW32 110 aa10.19□□□□□ -0.78
PBX3-204ENST00000373489 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
PBX3-204ENST00000373489 UBE2AP49459 152 aa10.18□□□□□ -0.78
PBX3-204ENST00000373489 SPRR1AP35321 89 aa10.17□□□□□ -0.78
PBX3-204ENST00000373489 LINC00588Q9Y4M8 146 aa10.16□□□□□ -0.78
PBX3-204ENST00000373489 ANK2Q01484 3957 aa10.15□□□□□ -0.78
PBX3-204ENST00000373489 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
PBX3-204ENST00000373489 LCA10Q71F78 164 aa10.14□□□□□ -0.79
PBX3-204ENST00000373489 MRPL55Q7Z7F7 128 aaKnown RBP10.14□□□□□ -0.79
PBX3-204ENST00000373489 LIMD2Q9BT23 127 aa10.14□□□□□ -0.79
PBX3-204ENST00000373489 A6NED7 52 aa10.14□□□□□ -0.79
PBX3-204ENST00000373489 MDFIQ99750 246 aa10.14□□□□□ -0.79
PBX3-204ENST00000373489 CASC2Q6XLA1 102 aa10.13□□□□□ -0.79
PBX3-204ENST00000373489 H3BNG1 76 aa10.12□□□□□ -0.79
PBX3-204ENST00000373489 PRLHP81277 87 aa10.11□□□□□ -0.79
PBX3-204ENST00000373489 KTN1-AS1Q86SY8 53 aa10.11□□□□□ -0.79
PBX3-204ENST00000373489 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
PBX3-204ENST00000373489 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
PBX3-204ENST00000373489 NOTCH1P46531 2555 aa10.1□□□□□ -0.79
PBX3-204ENST00000373489 REG3GQ6UW15 175 aa10.09□□□□□ -0.79
PBX3-204ENST00000373489 PLA2G2DQ9UNK4 145 aa10.09□□□□□ -0.79
PBX3-204ENST00000373489 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
PBX3-204ENST00000373489 SRRM2Q9UQ35 2752 aaKnown RBP10.08□□□□□ -0.8
PBX3-204ENST00000373489 LINC01556Q5JQF7 62 aa10.08□□□□□ -0.8
PBX3-204ENST00000373489 TLX1NBP0CAT3 122 aa10.08□□□□□ -0.8
PBX3-204ENST00000373489 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
PBX3-204ENST00000373489 COA5Q86WW8 74 aa10.07□□□□□ -0.8
PBX3-204ENST00000373489 TENM3Q9P273 2699 aa10.06□□□□□ -0.8
PBX3-204ENST00000373489 IGLV5-37A0A075B6J1 123 aa10.05□□□□□ -0.8
PBX3-204ENST00000373489 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
PBX3-204ENST00000373489 DNAH3Q8TD57 4116 aa10.04□□□□□ -0.8
PBX3-204ENST00000373489 ATP11AUNQ6ZP68 121 aa10.03□□□□□ -0.8
PBX3-204ENST00000373489 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
PBX3-204ENST00000373489 A0A096LNI7 61 aa10.03□□□□□ -0.8
PBX3-204ENST00000373489 NBEAL1Q6ZS30 2694 aa10.03□□□□□ -0.8
PBX3-204ENST00000373489 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
PBX3-204ENST00000373489 Q75L30 129 aa10.03□□□□□ -0.8
PBX3-204ENST00000373489 SPAG11AQ6PDA7 123 aa10.02□□□□□ -0.81
PBX3-204ENST00000373489 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.81
PBX3-204ENST00000373489 H0Y9J4 135 aa10.01□□□□□ -0.81
PBX3-204ENST00000373489 C11orf45Q8TAV5 145 aa10.01□□□□□ -0.81
PBX3-204ENST00000373489 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
PBX3-204ENST00000373489 K7EIL1 84 aa10□□□□□ -0.81
PBX3-204ENST00000373489 H3BPC8 53 aa10□□□□□ -0.81
PBX3-204ENST00000373489 A6NN06 94 aa9.99□□□□□ -0.81
PBX3-204ENST00000373489 LOC101927531A0A1B0GV80 90 aa9.98□□□□□ -0.81
PBX3-204ENST00000373489 A8MWP4 228 aa9.97□□□□□ -0.81
PBX3-204ENST00000373489 IGLV7-46A0A075B6I9 117 aa9.95□□□□□ -0.82
PBX3-204ENST00000373489 CSMD3Q7Z407 3707 aa9.95□□□□□ -0.82
PBX3-204ENST00000373489 DNAH10OSP0CZ25 163 aa9.94□□□□□ -0.82
PBX3-204ENST00000373489 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
PBX3-204ENST00000373489 NDUFS5O43920 106 aa9.94□□□□□ -0.82
PBX3-204ENST00000373489 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
PBX3-204ENST00000373489 IGLV8-61A0A075B6I0 122 aa9.93□□□□□ -0.82
PBX3-204ENST00000373489 MOBPQ13875 183 aa9.93□□□□□ -0.82
PBX3-204ENST00000373489 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
PBX3-204ENST00000373489 SPINK7P58062 85 aa9.91□□□□□ -0.82
PBX3-204ENST00000373489 MMP24-AS1A0A0U1RRL7 71 aa9.91□□□□□ -0.82
PBX3-204ENST00000373489 DNAH1Q9P2D7 4330 aa9.88□□□□□ -0.83
PBX3-204ENST00000373489 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
PBX3-204ENST00000373489 C7orf65Q6ZTY9 151 aa9.87□□□□□ -0.83
PBX3-204ENST00000373489 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
PBX3-204ENST00000373489 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
PBX3-204ENST00000373489 TENM2Q9NT68 2774 aa9.84□□□□□ -0.83
PBX3-204ENST00000373489 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
PBX3-204ENST00000373489 HRES1P13985 223 aa9.82□□□□□ -0.84
PBX3-204ENST00000373489 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
PBX3-204ENST00000373489 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
PBX3-204ENST00000373489 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
PBX3-204ENST00000373489 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
PBX3-204ENST00000373489 DNHD1Q96M86 4753 aa9.77□□□□□ -0.85
PBX3-204ENST00000373489 PRAC1Q96KF2 57 aa9.76□□□□□ -0.85
PBX3-204ENST00000373489 IGHV6-1A0A0B4J1U7 121 aa9.76□□□□□ -0.85
PBX3-204ENST00000373489 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
PBX3-204ENST00000373489 C8orf17Q9NRJ1 99 aa9.74□□□□□ -0.85
PBX3-204ENST00000373489 SPRR1BP22528 89 aa9.74□□□□□ -0.85
PBX3-204ENST00000373489 TP53AIP1Q9HCN2 124 aa9.74□□□□□ -0.85
PBX3-204ENST00000373489 DNAH9Q9NYC9 4486 aa9.73□□□□□ -0.85
PBX3-204ENST00000373489 Q96NJ1 140 aa9.72□□□□□ -0.85
PBX3-204ENST00000373489 LINC00313P59037 77 aa9.71□□□□□ -0.85
PBX3-204ENST00000373489 Q6ZR54 194 aa9.71□□□□□ -0.85
PBX3-204ENST00000373489 LYSTQ99698 3801 aa9.71□□□□□ -0.85
PBX3-204ENST00000373489 STAB2Q8WWQ8 2551 aa9.71□□□□□ -0.86
PBX3-204ENST00000373489 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
PBX3-204ENST00000373489 A0A087X002 238 aa9.69□□□□□ -0.86
PBX3-204ENST00000373489 NOTCH2NLQ7Z3S9 236 aa9.69□□□□□ -0.86
PBX3-204ENST00000373489 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
PBX3-204ENST00000373489 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
PBX3-204ENST00000373489 C8orf87E5RJ46 101 aa9.67□□□□□ -0.86
PBX3-204ENST00000373489 MEGF8Q7Z7M0 2845 aa9.64□□□□□ -0.87
PBX3-204ENST00000373489 MRPL34Q9BQ48 92 aaKnown RBP9.63□□□□□ -0.87
PBX3-204ENST00000373489 A0A1B0GVX0 72 aa9.63□□□□□ -0.87
PBX3-204ENST00000373489 CDK2AP2O75956 126 aa9.63□□□□□ -0.87
PBX3-204ENST00000373489 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
PBX3-204ENST00000373489 KRTAP21-3Q3LHN1 58 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms