RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 Q1T7F1 81 aa11.34□□□□□ -0.59
HNF4A-203ENST00000372920 MAST4O15021 2626 aa11.32□□□□□ -0.6
HNF4A-203ENST00000372920 C16orf90A8MZG2 172 aa11.31□□□□□ -0.6
HNF4A-203ENST00000372920 NDUFB1O75438 58 aa11.3□□□□□ -0.6
HNF4A-203ENST00000372920 MP68P56378 58 aa11.3□□□□□ -0.6
HNF4A-203ENST00000372920 UBE2AP49459 152 aa11.3□□□□□ -0.6
HNF4A-203ENST00000372920 KRTAP24-1Q3LI83 254 aa11.3□□□□□ -0.6
HNF4A-203ENST00000372920 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-203ENST00000372920 PRB2P02812 416 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-203ENST00000372920 STAB1Q9NY15 2570 aa11.29□□□□□ -0.6
HNF4A-203ENST00000372920 DNAH3Q8TD57 4116 aa11.28□□□□□ -0.6
HNF4A-203ENST00000372920 TRAV22A0A0B4J277 110 aa11.28□□□□□ -0.6
HNF4A-203ENST00000372920 LINC00208Q96KT6 92 aa11.27□□□□□ -0.6
HNF4A-203ENST00000372920 NOTCH1P46531 2555 aa11.27□□□□□ -0.61
HNF4A-203ENST00000372920 KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
HNF4A-203ENST00000372920 FBN1P35555 2871 aaKnown RBP11.25□□□□□ -0.61
HNF4A-203ENST00000372920 DNAH10Q8IVF4 4471 aa11.25□□□□□ -0.61
HNF4A-203ENST00000372920 CNBPP62633 177 aaKnown RBP11.25□□□□□ -0.61
HNF4A-203ENST00000372920 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
HNF4A-203ENST00000372920 PSPHP1O15172 72 aa11.25□□□□□ -0.61
HNF4A-203ENST00000372920 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
HNF4A-203ENST00000372920 CASC2Q6XLA1 102 aa11.24□□□□□ -0.61
HNF4A-203ENST00000372920 PRR15Q8IV56 129 aa11.23□□□□□ -0.61
HNF4A-203ENST00000372920 PHF5AQ7RTV0 110 aaKnown RBP11.22□□□□□ -0.61
HNF4A-203ENST00000372920 H0Y9P7 68 aa11.22□□□□□ -0.61
HNF4A-203ENST00000372920 CHTF8P0CG12 524 aa11.21□□□□□ -0.62
HNF4A-203ENST00000372920 B9D2Q9BPU9 175 aa11.21□□□□□ -0.62
HNF4A-203ENST00000372920 HUWE1Q7Z6Z7 4374 aaKnown RBP11.2□□□□□ -0.62
HNF4A-203ENST00000372920 SRRM2Q9UQ35 2752 aaKnown RBP11.2□□□□□ -0.62
HNF4A-203ENST00000372920 LINC00472Q9H8W2 130 aa11.2□□□□□ -0.62
HNF4A-203ENST00000372920 A8MWP4 228 aa11.19□□□□□ -0.62
HNF4A-203ENST00000372920 SPRR1BP22528 89 aa11.19□□□□□ -0.62
HNF4A-203ENST00000372920 H0Y9J4 135 aa11.16□□□□□ -0.62
HNF4A-203ENST00000372920 H3BPC8 53 aa11.16□□□□□ -0.62
HNF4A-203ENST00000372920 SPANXA2-OT1Q8N9U9 137 aa11.15□□□□□ -0.62
HNF4A-203ENST00000372920 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
HNF4A-203ENST00000372920 LYSTQ99698 3801 aa11.14□□□□□ -0.63
HNF4A-203ENST00000372920 A8MUN3 132 aa11.14□□□□□ -0.63
HNF4A-203ENST00000372920 K7EIL1 84 aa11.13□□□□□ -0.63
HNF4A-203ENST00000372920 DNAH9Q9NYC9 4486 aa11.13□□□□□ -0.63
HNF4A-203ENST00000372920 V9GYY9 64 aa11.12□□□□□ -0.63
HNF4A-203ENST00000372920 COL6A5A8TX70 2615 aa11.11□□□□□ -0.63
HNF4A-203ENST00000372920 C9orf163Q8N9P6 203 aa11.1□□□□□ -0.63
HNF4A-203ENST00000372920 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
HNF4A-203ENST00000372920 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
HNF4A-203ENST00000372920 UBE2DNLQ8IWF7 75 aa11.07□□□□□ -0.64
HNF4A-203ENST00000372920 Q5VV11 94 aa11.07□□□□□ -0.64
HNF4A-203ENST00000372920 Q8N9P0 234 aaPredicted RBP11.05□□□□□ -0.64
HNF4A-203ENST00000372920 CSMD3Q7Z407 3707 aa11.02□□□□□ -0.64
HNF4A-203ENST00000372920 PANO1I0J062 215 aa11.02□□□□□ -0.65
HNF4A-203ENST00000372920 KRTAP13-1Q8IUC0 172 aa11.02□□□□□ -0.65
HNF4A-203ENST00000372920 APLNQ9ULZ1 77 aa11.01□□□□□ -0.65
HNF4A-203ENST00000372920 A8MU10 97 aa11□□□□□ -0.65
HNF4A-203ENST00000372920 LIMD2Q9BT23 127 aa11□□□□□ -0.65
HNF4A-203ENST00000372920 Q96NJ1 140 aa11□□□□□ -0.65
HNF4A-203ENST00000372920 STAB2Q8WWQ8 2551 aa10.99□□□□□ -0.65
HNF4A-203ENST00000372920 IGLV9-49A0A0B4J1Y8 123 aa10.99□□□□□ -0.65
HNF4A-203ENST00000372920 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
HNF4A-203ENST00000372920 COA5Q86WW8 74 aa10.97□□□□□ -0.65
HNF4A-203ENST00000372920 PRR15LQ9BU68 103 aa10.97□□□□□ -0.65
HNF4A-203ENST00000372920 CHKB-CPT1BH3BT56 60 aa10.97□□□□□ -0.65
HNF4A-203ENST00000372920 PMAIP1Q13794 54 aa10.97□□□□□ -0.65
HNF4A-203ENST00000372920 ASB16-AS1Q495Z4 193 aa10.96□□□□□ -0.66
HNF4A-203ENST00000372920 PCOTHQ58A44 107 aa10.96□□□□□ -0.66
HNF4A-203ENST00000372920 COL7A1Q02388 2944 aa10.93□□□□□ -0.66
HNF4A-203ENST00000372920 MOBPQ13875 183 aa10.93□□□□□ -0.66
HNF4A-203ENST00000372920 TENM2Q9NT68 2774 aa10.93□□□□□ -0.66
HNF4A-203ENST00000372920 CD164Q04900 197 aa10.93□□□□□ -0.66
HNF4A-203ENST00000372920 TP53AIP1Q9HCN2 124 aa10.93□□□□□ -0.66
HNF4A-203ENST00000372920 C8orf17Q9NRJ1 99 aa10.92□□□□□ -0.66
HNF4A-203ENST00000372920 DNAH7Q8WXX0 4024 aa10.9□□□□□ -0.66
HNF4A-203ENST00000372920 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.66
HNF4A-203ENST00000372920 Q6ZR54 194 aa10.89□□□□□ -0.67
HNF4A-203ENST00000372920 NBDYA0A0U1RRE5 68 aa10.89□□□□□ -0.67
HNF4A-203ENST00000372920 IGHV6-1A0A0B4J1U7 121 aa10.88□□□□□ -0.67
HNF4A-203ENST00000372920 SEC61GP60059 68 aa10.88□□□□□ -0.67
HNF4A-203ENST00000372920 MGAM2Q2M2H8 2515 aa10.88□□□□□ -0.67
HNF4A-203ENST00000372920 LINC00483Q53H64 154 aa10.87□□□□□ -0.67
HNF4A-203ENST00000372920 Q6ZRN7 208 aaPredicted RBP10.87□□□□□ -0.67
HNF4A-203ENST00000372920 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
HNF4A-203ENST00000372920 LOC101927531A0A1B0GV80 90 aa10.86□□□□□ -0.67
HNF4A-203ENST00000372920 NDUFS5O43920 106 aa10.86□□□□□ -0.67
HNF4A-203ENST00000372920 Q75L30 129 aa10.86□□□□□ -0.67
HNF4A-203ENST00000372920 A0A1B0GVX0 72 aa10.86□□□□□ -0.67
HNF4A-203ENST00000372920 DYNC2H1Q8NCM8 4307 aaKnown RBP10.84□□□□□ -0.67
HNF4A-203ENST00000372920 LCA10Q71F78 164 aa10.82□□□□□ -0.68
HNF4A-203ENST00000372920 WWC2-AS2Q96NR7 200 aa10.82□□□□□ -0.68
HNF4A-203ENST00000372920 A6NED7 52 aa10.81□□□□□ -0.68
HNF4A-203ENST00000372920 PLECQ15149 4684 aaKnown RBP10.81□□□□□ -0.68
HNF4A-203ENST00000372920 CDK2AP2O75956 126 aa10.81□□□□□ -0.68
HNF4A-203ENST00000372920 MRPL34Q9BQ48 92 aaKnown RBP10.81□□□□□ -0.68
HNF4A-203ENST00000372920 MDFIQ99750 246 aa10.8□□□□□ -0.68
HNF4A-203ENST00000372920 ANAPC11Q9NYG5 84 aa10.8□□□□□ -0.68
HNF4A-203ENST00000372920 A0A087X002 238 aa10.8□□□□□ -0.68
HNF4A-203ENST00000372920 SPAG11AQ6PDA7 123 aa10.8□□□□□ -0.68
HNF4A-203ENST00000372920 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
HNF4A-203ENST00000372920 ZNF706Q9Y5V0 76 aaPredicted RBP10.79□□□□□ -0.68
HNF4A-203ENST00000372920 SPTSSBQ8NFR3 76 aa10.78□□□□□ -0.68
HNF4A-203ENST00000372920 PSORS1C2Q9UIG4 136 aa10.77□□□□□ -0.69
HNF4A-203ENST00000372920 HRES1P13985 223 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms