RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 FAT3Q8TDW7 4589 aa9.25□□□□□ -0.93
PRPF38B-202ENST00000370022 K7ERJ3 54 aa9.24□□□□□ -0.93
PRPF38B-202ENST00000370022 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
PRPF38B-202ENST00000370022 KRTAP10-8P60410 259 aa9.24□□□□□ -0.93
PRPF38B-202ENST00000370022 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
PRPF38B-202ENST00000370022 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
PRPF38B-202ENST00000370022 H0YGX0 51 aa9.23□□□□□ -0.93
PRPF38B-202ENST00000370022 SNCGO76070 127 aa9.23□□□□□ -0.93
PRPF38B-202ENST00000370022 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
PRPF38B-202ENST00000370022 ANAPC11Q9NYG5 84 aa9.23□□□□□ -0.93
PRPF38B-202ENST00000370022 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
PRPF38B-202ENST00000370022 A0A087X002 238 aa9.22□□□□□ -0.93
PRPF38B-202ENST00000370022 A0A1B0GX51 115 aa9.22□□□□□ -0.93
PRPF38B-202ENST00000370022 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
PRPF38B-202ENST00000370022 GAGE2AQ6NT46 116 aa9.22□□□□□ -0.93
PRPF38B-202ENST00000370022 hADV29S1A0JD25 119 aa9.2□□□□□ -0.94
PRPF38B-202ENST00000370022 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
PRPF38B-202ENST00000370022 ST20-AS1Q8NBB2 130 aa9.2□□□□□ -0.94
PRPF38B-202ENST00000370022 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
PRPF38B-202ENST00000370022 TRIAP1O43715 76 aa9.19□□□□□ -0.94
PRPF38B-202ENST00000370022 SPRR1BP22528 89 aa9.19□□□□□ -0.94
PRPF38B-202ENST00000370022 COX6CP09669 75 aa9.18□□□□□ -0.94
PRPF38B-202ENST00000370022 PSMB2P49721 201 aa9.18□□□□□ -0.94
PRPF38B-202ENST00000370022 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
PRPF38B-202ENST00000370022 KRTAP13-2Q52LG2 175 aa9.17□□□□□ -0.94
PRPF38B-202ENST00000370022 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
PRPF38B-202ENST00000370022 TEX49A0A1B0GTD5 131 aa9.16□□□□□ -0.94
PRPF38B-202ENST00000370022 J3KT08 172 aa9.16□□□□□ -0.94
PRPF38B-202ENST00000370022 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.16□□□□□ -0.94
PRPF38B-202ENST00000370022 TNXBP22105 4242 aa9.14□□□□□ -0.95
PRPF38B-202ENST00000370022 SCGB1C2P0DMR2 95 aa9.14□□□□□ -0.95
PRPF38B-202ENST00000370022 Q6ZQY7 126 aa9.14□□□□□ -0.95
PRPF38B-202ENST00000370022 DEFB105AQ8NG35 78 aa9.14□□□□□ -0.95
PRPF38B-202ENST00000370022 LAMTOR3Q9UHA4 124 aa9.13□□□□□ -0.95
PRPF38B-202ENST00000370022 LINC01547P58512 204 aaPredicted RBP9.12□□□□□ -0.95
PRPF38B-202ENST00000370022 C3orf22Q8N5N4 141 aa9.12□□□□□ -0.95
PRPF38B-202ENST00000370022 FAM218AQ96MZ4 157 aa9.12□□□□□ -0.95
PRPF38B-202ENST00000370022 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
PRPF38B-202ENST00000370022 IGLV9-49A0A0B4J1Y8 123 aa9.11□□□□□ -0.95
PRPF38B-202ENST00000370022 GHRHP01286 108 aa9.11□□□□□ -0.95
PRPF38B-202ENST00000370022 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
PRPF38B-202ENST00000370022 Q8N377 158 aa9.11□□□□□ -0.95
PRPF38B-202ENST00000370022 FAM240AA0A1B0GVK7 77 aa9.09□□□□□ -0.95
PRPF38B-202ENST00000370022 MOBPQ13875 183 aa9.09□□□□□ -0.95
PRPF38B-202ENST00000370022 CLEC2BQ92478 149 aa9.09□□□□□ -0.95
PRPF38B-202ENST00000370022 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
PRPF38B-202ENST00000370022 ANKRD29Q8N6D5 301 aa9.08□□□□□ -0.96
PRPF38B-202ENST00000370022 Q8NBF4 154 aa9.08□□□□□ -0.96
PRPF38B-202ENST00000370022 DNAL4O96015 105 aa9.07□□□□□ -0.96
PRPF38B-202ENST00000370022 C9orf153Q5TBE3 101 aa9.07□□□□□ -0.96
PRPF38B-202ENST00000370022 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
PRPF38B-202ENST00000370022 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
PRPF38B-202ENST00000370022 C9JAW5 83 aa9.07□□□□□ -0.96
PRPF38B-202ENST00000370022 UQCRQO14949 82 aa9.06□□□□□ -0.96
PRPF38B-202ENST00000370022 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
PRPF38B-202ENST00000370022 H3BQ85 93 aa9.04□□□□□ -0.96
PRPF38B-202ENST00000370022 LST1O00453 97 aa9.04□□□□□ -0.96
PRPF38B-202ENST00000370022 TRACP01848 142 aa9.04□□□□□ -0.96
PRPF38B-202ENST00000370022 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
PRPF38B-202ENST00000370022 F8WEM9 126 aa9.03□□□□□ -0.96
PRPF38B-202ENST00000370022 TCL1BO95988 128 aa9.02□□□□□ -0.97
PRPF38B-202ENST00000370022 ORMDL1Q9P0S3 153 aa9.02□□□□□ -0.97
PRPF38B-202ENST00000370022 SPINK1P00995 79 aa9□□□□□ -0.97
PRPF38B-202ENST00000370022 ATXN8Q156A1 80 aa9□□□□□ -0.97
PRPF38B-202ENST00000370022 ACYP1P07311 99 aa8.99□□□□□ -0.97
PRPF38B-202ENST00000370022 TMEM256-PLSCR3K7ERE1 68 aa8.99□□□□□ -0.97
PRPF38B-202ENST00000370022 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
PRPF38B-202ENST00000370022 RPS29P62273 56 aaKnown RBP8.98□□□□□ -0.97
PRPF38B-202ENST00000370022 Q6JHZ5 121 aa8.97□□□□□ -0.97
PRPF38B-202ENST00000370022 CD164Q04900 197 aa8.95□□□□□ -0.98
PRPF38B-202ENST00000370022 H3BT86 120 aa8.95□□□□□ -0.98
PRPF38B-202ENST00000370022 TMEM258P61165 79 aa8.95□□□□□ -0.98
PRPF38B-202ENST00000370022 COX7CP15954 63 aa8.93□□□□□ -0.98
PRPF38B-202ENST00000370022 HMCN2Q8NDA2 5059 aa8.93□□□□□ -0.98
PRPF38B-202ENST00000370022 BAALC-AS2P0C853 105 aa8.9□□□□□ -0.98
PRPF38B-202ENST00000370022 IGFL1Q6UW32 110 aa8.9□□□□□ -0.98
PRPF38B-202ENST00000370022 LIMD2Q9BT23 127 aa8.9□□□□□ -0.99
PRPF38B-202ENST00000370022 HRCT1Q6UXD1 115 aa8.89□□□□□ -0.99
PRPF38B-202ENST00000370022 LINC00643Q86TS7 51 aa8.89□□□□□ -0.99
PRPF38B-202ENST00000370022 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
PRPF38B-202ENST00000370022 FAM236AA0A1B0GUQ0 79 aa8.88□□□□□ -0.99
PRPF38B-202ENST00000370022 FAM236BA0A1B0GV22 79 aa8.88□□□□□ -0.99
PRPF38B-202ENST00000370022 A0A0G2JQZ4 141 aa8.87□□□□□ -0.99
PRPF38B-202ENST00000370022 ATOX1O00244 68 aa8.87□□□□□ -0.99
PRPF38B-202ENST00000370022 Q5XG85 94 aa8.86□□□□□ -0.99
PRPF38B-202ENST00000370022 HIST1H4AP62805 103 aaKnown RBP8.83□□□□□ -1
PRPF38B-202ENST00000370022 PRR4Q16378 134 aa8.83□□□□□ -1
PRPF38B-202ENST00000370022 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
PRPF38B-202ENST00000370022 JMJD7-PLA2G4BH0Y9G9 81 aa8.82□□□□□ -1
PRPF38B-202ENST00000370022 RBM3P98179 157 aaKnown RBP8.82□□□□□ -1
PRPF38B-202ENST00000370022 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
PRPF38B-202ENST00000370022 UBR4Q5T4S7 5183 aa8.8□□□□□ -1
PRPF38B-202ENST00000370022 DSCR8Q96T75 97 aa8.8□□□□□ -1
PRPF38B-202ENST00000370022 TRBV7-4A0A0J9YYF1 115 aa8.79□□□□□ -1
PRPF38B-202ENST00000370022 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
PRPF38B-202ENST00000370022 ASB16-AS1Q495Z4 193 aa8.77□□□□□ -1.01
PRPF38B-202ENST00000370022 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
PRPF38B-202ENST00000370022 CCKP06307 115 aa8.75□□□□□ -1.01
PRPF38B-202ENST00000370022 PDE6GP18545 87 aa8.75□□□□□ -1.01
PRPF38B-202ENST00000370022 SERP2Q8N6R1 65 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms