RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 IGF2RP11717 2491 aa0.81□□□□□ -2.28
SMARCAD1-202ENST00000359052 SCGB1C2P0DMR2 95 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 NPC2P61916 151 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 BLCAPP62952 87 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 SMR3AQ99954 134 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 PSORS1C2Q9UIG4 136 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.281e-7■■■■■ 29.4
SMARCAD1-202ENST00000359052 TLN1Q9Y490 2541 aaKnown RBP0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 CREBBPQ92793 2442 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 IGKV2D-30A0A075B6S6 120 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 SNRPD3P62318 126 aaKnown RBP0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 CLEC2BQ92478 149 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 ZNRD1Q9P1U0 126 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 EP300Q09472 2414 aaPredicted RBP0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 LINC00304Q8N9R0 145 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 SEC16AO15027 2179 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 H3BPC8 53 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 J3QR89 54 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 PRM2P04554 102 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 TAC3Q9UHF0 121 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 SETD2Q9BYW2 2564 aaPredicted RBP0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 ZFYVE26Q68DK2 2539 aa0.8□□□□□ -2.28
SMARCAD1-202ENST00000359052 TRAV12-3A0A0B4J271 114 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 IGKV3-20P01619 116 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 KRTAP12-4P60329 112 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 RAB42Q8N4Z0 105 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 SMIM11BQ8TCY0 68 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 C16orf74Q96GX8 76 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 SAA2P0DJI9 122 aaPredicted RBP0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 KRTAP25-1Q3LHN0 102 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 ORMDL2Q53FV1 153 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 CNEP1R1Q8N9A8 125 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 GAFA1Q96PS6 74 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 DNAJC13O75165 2243 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 IGKV2-40A0A087WW87 121 aaPredicted RBP0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 LY6G6CO95867 125 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 IGKV2D-40P01614 121 aaPredicted RBP0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 COX7A1P24310 79 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 XAGE1AQ9HD64 81 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 CACNA1HO95180 2353 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 F8WEM9 126 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 PRB2P02812 416 aaPredicted RBP0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 PATE1Q8WXA2 126 aa0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 RPL39LQ96EH5 51 aaKnown RBP0.79□□□□□ -2.28
SMARCAD1-202ENST00000359052 DEFB131BA0A096LNP1 70 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 TMEM256-PLSCR3K7ERE1 68 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 IAPPP10997 89 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 PLGLAQ15195 96 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 FAM103A1Q9BTL3 118 aaKnown RBP0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 DYNLRB1Q9NP97 96 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 UBE2BP63146 152 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 C10orf113Q5VZT2 155 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 MMP24-AS1A0A0U1RRL7 71 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 EDDM3BP56851 147 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 PRB3Q04118 309 aaPredicted RBP0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 Q6ZSA8 131 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 TTTY10Q9BZA0 68 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 GPR179Q6PRD1 2367 aa0.78□□□□□ -2.28
SMARCAD1-202ENST00000359052 H0YGG7 62 aa0.78□□□□□ -2.29
SMARCAD1-202ENST00000359052 SNCGO76070 127 aa0.78□□□□□ -2.29
SMARCAD1-202ENST00000359052 FCGBPQ9Y6R7 5405 aaPredicted RBP0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 NDUFAF8A1L188 74 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 INSP01308 110 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 IL4P05112 153 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 SAA1P0DJI8 122 aaPredicted RBP0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 CCL18P55774 89 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 WFDC9Q8NEX5 89 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 MT1HL1P0DM35 61 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 KRTAP13-4Q3LI77 160 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 C1orf137Q5JT78 98 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 RPL39P62891 51 aaKnown RBP0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 CIRBPQ14011 172 aaKnown RBP0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 ZNF56Q15929 161 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 NDUFA12Q9UI09 145 aa0.77□□□□□ -2.29
SMARCAD1-202ENST00000359052 NDUFB3O43676 98 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 KRTAP20-1Q3LI63 56 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 FXYD7P58549 80 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 ENSAO43768 121 aaKnown RBP0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 H3BQ85 93 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 KRTAP12-2P59991 146 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 COX17Q14061 63 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 NREPQ16612 68 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 SPANXN5Q5MJ07 72 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 Q6ZQY7 126 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 POLEQ07864 2286 aa0.76□□□□□ -2.29
SMARCAD1-202ENST00000359052 IGKV3-7A0A075B6H7 116 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 IGLV7-43P04211 117 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 PCOTHQ58A44 107 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 FDCSPQ8NFU4 85 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 MGAM2Q2M2H8 2515 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 PSMB2P49721 201 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 NNATQ16517 81 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 RPL39P5Q59GN2 51 aa0.75□□□□□ -2.29
SMARCAD1-202ENST00000359052 ARID1AO14497 2285 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms