RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
C11orf54-202ENST00000354421 ALMS1Q8TCU4 4167 aa4.95□□□□□ -1.62
C11orf54-202ENST00000354421 PRYO14603 147 aa4.94□□□□□ -1.62
C11orf54-202ENST00000354421 EGFEM1PQ0D2K5 195 aa4.94□□□□□ -1.62
C11orf54-202ENST00000354421 XAGE1AQ9HD64 81 aa4.94□□□□□ -1.62
C11orf54-202ENST00000354421 LINC00474Q9P2X8 69 aa4.94□□□□□ -1.62
C11orf54-202ENST00000354421 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
C11orf54-202ENST00000354421 K7EIL1 84 aa4.94□□□□□ -1.62
C11orf54-202ENST00000354421 KLK12Q9UKR0 248 aa4.94□□□□□ -1.62
C11orf54-202ENST00000354421 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
C11orf54-202ENST00000354421 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
C11orf54-202ENST00000354421 Q6ZTC4 211 aa4.92□□□□□ -1.62
C11orf54-202ENST00000354421 FUSP35637 526 aaKnown RBP eCLIP4.92□□□□□ -1.62
C11orf54-202ENST00000354421 APOC4P55056 127 aa4.92□□□□□ -1.62
C11orf54-202ENST00000354421 KRTAP26-1Q6PEX3 210 aa4.92□□□□□ -1.62
C11orf54-202ENST00000354421 Q8NAQ8 132 aa4.92□□□□□ -1.62
C11orf54-202ENST00000354421 DEFB4AO15263 64 aa4.91□□□□□ -1.62
C11orf54-202ENST00000354421 KRTAP10-3P60369 221 aa4.91□□□□□ -1.62
C11orf54-202ENST00000354421 ESRGQ1W209 222 aa4.91□□□□□ -1.62
C11orf54-202ENST00000354421 DEFB135Q30KP9 77 aa4.91□□□□□ -1.62
C11orf54-202ENST00000354421 CAMK2N2Q96S95 79 aa4.91□□□□□ -1.62
C11orf54-202ENST00000354421 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.62
C11orf54-202ENST00000354421 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.62
C11orf54-202ENST00000354421 SPART-AS1P0CW21 52 aa4.9□□□□□ -1.62
C11orf54-202ENST00000354421 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.62
C11orf54-202ENST00000354421 HIGD2BQ4VC39 106 aa4.9□□□□□ -1.62
C11orf54-202ENST00000354421 Q8N9L7 120 aa4.9□□□□□ -1.62
C11orf54-202ENST00000354421 DYNC1H1Q14204 4646 aaKnown RBP4.9□□□□□ -1.63
C11orf54-202ENST00000354421 Q6ZRU5 148 aa4.89□□□□□ -1.63
C11orf54-202ENST00000354421 C1orf43Q9BWL3 253 aa4.89□□□□□ -1.63
C11orf54-202ENST00000354421 KCNQ1DNQ9H478 68 aa4.89□□□□□ -1.63
C11orf54-202ENST00000354421 HSPG2P98160 4391 aa4.89□□□□□ -1.63
C11orf54-202ENST00000354421 Q8N377 158 aa4.89□□□□□ -1.63
C11orf54-202ENST00000354421 HTN3P15516 51 aa4.88□□□□□ -1.63
C11orf54-202ENST00000354421 C15orf56Q8N910 161 aa4.88□□□□□ -1.63
C11orf54-202ENST00000354421 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
C11orf54-202ENST00000354421 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
C11orf54-202ENST00000354421 H3BNG1 76 aa4.87□□□□□ -1.63
C11orf54-202ENST00000354421 PKHD1P08F94 4074 aa4.87□□□□□ -1.63
C11orf54-202ENST00000354421 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
C11orf54-202ENST00000354421 hDV103S1A0JD37 113 aa4.86□□□□□ -1.63
C11orf54-202ENST00000354421 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
C11orf54-202ENST00000354421 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
C11orf54-202ENST00000354421 ZCCHC13Q8WW36 166 aaKnown RBP4.86□□□□□ -1.63
C11orf54-202ENST00000354421 A0A1W2PNM2 257 aa4.86□□□□□ -1.63
C11orf54-202ENST00000354421 SMIM29Q86T20 159 aa4.86□□□□□ -1.63
C11orf54-202ENST00000354421 DHRS4-AS1Q9P1J3 65 aa4.86□□□□□ -1.63
C11orf54-202ENST00000354421 NDUFB1O75438 58 aa4.85□□□□□ -1.63
C11orf54-202ENST00000354421 Q1T7F1 81 aa4.85□□□□□ -1.63
C11orf54-202ENST00000354421 Q6ZRP5 223 aa4.85□□□□□ -1.63
C11orf54-202ENST00000354421 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
C11orf54-202ENST00000354421 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
C11orf54-202ENST00000354421 PKIGQ9Y2B9 76 aa4.85□□□□□ -1.63
C11orf54-202ENST00000354421 V9GYY9 64 aa4.85□□□□□ -1.63
C11orf54-202ENST00000354421 IGLV5-37A0A075B6J1 123 aa4.84□□□□□ -1.63
C11orf54-202ENST00000354421 WFDC10BQ8IUB3 73 aa4.84□□□□□ -1.63
C11orf54-202ENST00000354421 Q8NBF4 154 aa4.84□□□□□ -1.63
C11orf54-202ENST00000354421 C7orf33Q8WU49 177 aa4.84□□□□□ -1.63
C11orf54-202ENST00000354421 SPRR4Q96PI1 79 aa4.84□□□□□ -1.63
C11orf54-202ENST00000354421 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.64
C11orf54-202ENST00000354421 ETDCA0A1B0GVM5 59 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 SYCNQ0VAF6 134 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 NKAPP1Q8N9T2 125 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 DEFB105AQ8NG35 78 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 CYP4F30PQ9H0H9 118 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 KRTAP4-16G5E9R7 235 aaPredicted RBP4.83□□□□□ -1.64
C11orf54-202ENST00000354421 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 SPRR1AP35321 89 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 C1orf137Q5JT78 98 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 Q6ZRX8 168 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 PRR15Q8IV56 129 aa4.83□□□□□ -1.64
C11orf54-202ENST00000354421 DSCR10P59022 87 aa4.82□□□□□ -1.64
C11orf54-202ENST00000354421 SERTAD4-AS1Q5TG53 156 aa4.82□□□□□ -1.64
C11orf54-202ENST00000354421 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
C11orf54-202ENST00000354421 Q9BRP9 147 aa4.81□□□□□ -1.64
C11orf54-202ENST00000354421 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
C11orf54-202ENST00000354421 H3BPC8 53 aa4.8□□□□□ -1.64
C11orf54-202ENST00000354421 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
C11orf54-202ENST00000354421 LINC01556Q5JQF7 62 aa4.8□□□□□ -1.64
C11orf54-202ENST00000354421 C1orf64Q8NEQ6 169 aa4.8□□□□□ -1.64
C11orf54-202ENST00000354421 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.8□□□□□ -1.64
C11orf54-202ENST00000354421 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
C11orf54-202ENST00000354421 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
C11orf54-202ENST00000354421 IGKV2D-24A0A075B6R9 120 aa4.77□□□□□ -1.65
C11orf54-202ENST00000354421 K7EQZ3 153 aa4.77□□□□□ -1.65
C11orf54-202ENST00000354421 ST20-AS1Q8NBB2 130 aa4.77□□□□□ -1.65
C11orf54-202ENST00000354421 MYCBP2O75592 4640 aa4.77□□□□□ -1.65
C11orf54-202ENST00000354421 SPANXA2-OT1Q8N9U9 137 aa4.77□□□□□ -1.65
C11orf54-202ENST00000354421 RPL37AP8A6NKH3 93 aa4.76□□□□□ -1.65
C11orf54-202ENST00000354421 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
C11orf54-202ENST00000354421 KRTAP7-1Q8IUC3 87 aa4.76□□□□□ -1.65
C11orf54-202ENST00000354421 PSCAO43653 123 aa4.75□□□□□ -1.65
C11orf54-202ENST00000354421 DNAH10OSP0CZ25 163 aa4.75□□□□□ -1.65
C11orf54-202ENST00000354421 IGLV8-61A0A075B6I0 122 aa4.75□□□□□ -1.65
C11orf54-202ENST00000354421 TRAV22A0A0B4J277 110 aa4.75□□□□□ -1.65
C11orf54-202ENST00000354421 MP68P56378 58 aa4.75□□□□□ -1.65
C11orf54-202ENST00000354421 LINC00476Q8WZB0 136 aa4.75□□□□□ -1.65
C11orf54-202ENST00000354421 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
C11orf54-202ENST00000354421 LRCOL1A6NCL2 159 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms