RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
CXCL12-201ENST00000343575 RYR3Q15413 4870 aa9.29□□□□□ -0.92
CXCL12-201ENST00000343575 M0R378 163 aa9.27□□□□□ -0.93
CXCL12-201ENST00000343575 COX7BP24311 80 aa9.27□□□□□ -0.93
CXCL12-201ENST00000343575 PRO0628Q9UI54 55 aa9.27□□□□□ -0.93
CXCL12-201ENST00000343575 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
CXCL12-201ENST00000343575 SPACA4Q8TDM5 124 aa9.26□□□□□ -0.93
CXCL12-201ENST00000343575 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
CXCL12-201ENST00000343575 A0A1B0GVY2 172 aa9.25□□□□□ -0.93
CXCL12-201ENST00000343575 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
CXCL12-201ENST00000343575 F8WEM9 126 aa9.24□□□□□ -0.93
CXCL12-201ENST00000343575 ELOF1P60002 83 aaKnown RBP9.24□□□□□ -0.93
CXCL12-201ENST00000343575 ZNF73O43830 326 aaPredicted RBP9.23□□□□□ -0.93
CXCL12-201ENST00000343575 NKAPP1Q8N9T2 125 aa9.23□□□□□ -0.93
CXCL12-201ENST00000343575 LINC00474Q9P2X8 69 aa9.23□□□□□ -0.93
CXCL12-201ENST00000343575 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
CXCL12-201ENST00000343575 KRTAP10-1P60331 282 aa9.22□□□□□ -0.93
CXCL12-201ENST00000343575 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
CXCL12-201ENST00000343575 NREPQ16612 68 aa9.21□□□□□ -0.93
CXCL12-201ENST00000343575 SNURFQ9Y675 71 aa9.21□□□□□ -0.93
CXCL12-201ENST00000343575 IGLV1-50A0A075B6I6 118 aa9.21□□□□□ -0.94
CXCL12-201ENST00000343575 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
CXCL12-201ENST00000343575 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
CXCL12-201ENST00000343575 PKHD1P08F94 4074 aa9.2□□□□□ -0.94
CXCL12-201ENST00000343575 BPY2O14599 106 aa9.2□□□□□ -0.94
CXCL12-201ENST00000343575 A0A1B0GW54 56 aa9.19□□□□□ -0.94
CXCL12-201ENST00000343575 PHF5AQ7RTV0 110 aaKnown RBP9.19□□□□□ -0.94
CXCL12-201ENST00000343575 TMEM254Q8TBM7 123 aa9.19□□□□□ -0.94
CXCL12-201ENST00000343575 KCNQ1DNQ9H478 68 aa9.19□□□□□ -0.94
CXCL12-201ENST00000343575 Q6ZSA8 131 aa9.19□□□□□ -0.94
CXCL12-201ENST00000343575 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
CXCL12-201ENST00000343575 PLAC8Q9NZF1 115 aa9.18□□□□□ -0.94
CXCL12-201ENST00000343575 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
CXCL12-201ENST00000343575 KRTAP4-16G5E9R7 235 aaPredicted RBP9.15□□□□□ -0.94
CXCL12-201ENST00000343575 SPRR1AP35321 89 aa9.15□□□□□ -0.95
CXCL12-201ENST00000343575 LRP1BQ9NZR2 4599 aa9.15□□□□□ -0.95
CXCL12-201ENST00000343575 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
CXCL12-201ENST00000343575 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
CXCL12-201ENST00000343575 DYNC1H1Q14204 4646 aaKnown RBP9.13□□□□□ -0.95
CXCL12-201ENST00000343575 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
CXCL12-201ENST00000343575 PRYO14603 147 aa9.13□□□□□ -0.95
CXCL12-201ENST00000343575 IGKV4-1P06312 121 aa9.12□□□□□ -0.95
CXCL12-201ENST00000343575 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
CXCL12-201ENST00000343575 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
CXCL12-201ENST00000343575 REG3GQ6UW15 175 aa9.1□□□□□ -0.95
CXCL12-201ENST00000343575 UBE2BP63146 152 aa9.08□□□□□ -0.96
CXCL12-201ENST00000343575 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
CXCL12-201ENST00000343575 Q6ZRX8 168 aa9.06□□□□□ -0.96
CXCL12-201ENST00000343575 Q9BRP9 147 aa9.06□□□□□ -0.96
CXCL12-201ENST00000343575 DHRS4-AS1Q9P1J3 65 aa9.04□□□□□ -0.96
CXCL12-201ENST00000343575 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
CXCL12-201ENST00000343575 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
CXCL12-201ENST00000343575 PRLHP81277 87 aa9.03□□□□□ -0.96
CXCL12-201ENST00000343575 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.97
CXCL12-201ENST00000343575 APOBP04114 4563 aaKnown RBP9.01□□□□□ -0.97
CXCL12-201ENST00000343575 Q8N9L7 120 aa9□□□□□ -0.97
CXCL12-201ENST00000343575 H0Y9J4 135 aa8.98□□□□□ -0.97
CXCL12-201ENST00000343575 Q8N377 158 aa8.98□□□□□ -0.97
CXCL12-201ENST00000343575 BRK1Q8WUW1 75 aa8.98□□□□□ -0.97
CXCL12-201ENST00000343575 HIGD2AQ9BW72 106 aa8.97□□□□□ -0.97
CXCL12-201ENST00000343575 SRRM2Q9UQ35 2752 aaKnown RBP8.96□□□□□ -0.97
CXCL12-201ENST00000343575 C1orf137Q5JT78 98 aa8.96□□□□□ -0.97
CXCL12-201ENST00000343575 Q8NBF4 154 aa8.96□□□□□ -0.98
CXCL12-201ENST00000343575 EPPK1P58107 5090 aaKnown RBP8.96□□□□□ -0.98
CXCL12-201ENST00000343575 ST20-AS1Q8NBB2 130 aa8.95□□□□□ -0.98
CXCL12-201ENST00000343575 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
CXCL12-201ENST00000343575 hDV103S1A0JD37 113 aa8.94□□□□□ -0.98
CXCL12-201ENST00000343575 UBE2AP49459 152 aa8.94□□□□□ -0.98
CXCL12-201ENST00000343575 FAM229BQ4G0N7 80 aa8.94□□□□□ -0.98
CXCL12-201ENST00000343575 SMIM29Q86T20 159 aa8.94□□□□□ -0.98
CXCL12-201ENST00000343575 VPS13BQ7Z7G8 4022 aa8.93□□□□□ -0.98
CXCL12-201ENST00000343575 Q1T7F1 81 aa8.93□□□□□ -0.98
CXCL12-201ENST00000343575 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
CXCL12-201ENST00000343575 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
CXCL12-201ENST00000343575 ZCCHC13Q8WW36 166 aaKnown RBP8.92□□□□□ -0.98
CXCL12-201ENST00000343575 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
CXCL12-201ENST00000343575 C1orf195Q5TG92 126 aa8.91□□□□□ -0.98
CXCL12-201ENST00000343575 DEFB105AQ8NG35 78 aa8.91□□□□□ -0.98
CXCL12-201ENST00000343575 ZNF861PO60384 105 aa8.91□□□□□ -0.98
CXCL12-201ENST00000343575 NDUFB1O75438 58 aa8.91□□□□□ -0.98
CXCL12-201ENST00000343575 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
CXCL12-201ENST00000343575 CYP4F30PQ9H0H9 118 aa8.9□□□□□ -0.98
CXCL12-201ENST00000343575 FAT1Q14517 4588 aa8.9□□□□□ -0.99
CXCL12-201ENST00000343575 V9GYY9 64 aa8.87□□□□□ -0.99
CXCL12-201ENST00000343575 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
CXCL12-201ENST00000343575 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
CXCL12-201ENST00000343575 DSCR10P59022 87 aa8.85□□□□□ -0.99
CXCL12-201ENST00000343575 RYR1P21817 5038 aa8.85□□□□□ -0.99
CXCL12-201ENST00000343575 HCG22E2RYF7 251 aa8.85□□□□□ -0.99
CXCL12-201ENST00000343575 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
CXCL12-201ENST00000343575 C1orf64Q8NEQ6 169 aa8.85□□□□□ -0.99
CXCL12-201ENST00000343575 HSPG2P98160 4391 aa8.84□□□□□ -0.99
CXCL12-201ENST00000343575 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
CXCL12-201ENST00000343575 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
CXCL12-201ENST00000343575 SPRR1BP22528 89 aa8.83□□□□□ -1
CXCL12-201ENST00000343575 RPL37AP61513 92 aaKnown RBP8.83□□□□□ -1
CXCL12-201ENST00000343575 H3BPC8 53 aa8.81□□□□□ -1
CXCL12-201ENST00000343575 MP68P56378 58 aa8.81□□□□□ -1
CXCL12-201ENST00000343575 K7EQZ3 153 aa8.8□□□□□ -1
CXCL12-201ENST00000343575 LINC00483Q53H64 154 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms