RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 C12orf57Q99622 126 aa8.05□□□□□ -1.12
NECTIN1-202ENST00000340882 TIMM17BO60830 172 aa8.03□□□□□ -1.12
NECTIN1-202ENST00000340882 FABP4P15090 132 aa8.03□□□□□ -1.12
NECTIN1-202ENST00000340882 MPLKIPQ8TAP9 179 aa8.03□□□□□ -1.12
NECTIN1-202ENST00000340882 SERF1AO75920 110 aa8.02□□□□□ -1.13
NECTIN1-202ENST00000340882 SNRPEP62304 92 aaKnown RBP8.02□□□□□ -1.13
NECTIN1-202ENST00000340882 TTTY13Q9BZ97 58 aa8.01□□□□□ -1.13
NECTIN1-202ENST00000340882 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
NECTIN1-202ENST00000340882 F8WEM9 126 aa8□□□□□ -1.13
NECTIN1-202ENST00000340882 HRES1P13985 223 aa8□□□□□ -1.13
NECTIN1-202ENST00000340882 CLEC2BQ92478 149 aa8□□□□□ -1.13
NECTIN1-202ENST00000340882 S100A2P29034 98 aa7.99□□□□□ -1.13
NECTIN1-202ENST00000340882 Q6JHZ5 121 aa7.97□□□□□ -1.13
NECTIN1-202ENST00000340882 HSPB8Q9UJY1 196 aa7.97□□□□□ -1.13
NECTIN1-202ENST00000340882 A6NDN8 102 aa7.96□□□□□ -1.14
NECTIN1-202ENST00000340882 LST1O00453 97 aa7.96□□□□□ -1.14
NECTIN1-202ENST00000340882 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BKO60814 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BJP06899 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BOP23527 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BBP33778 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BDP58876 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BCP62807 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST2H2BEQ16778 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BHQ93079 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BNQ99877 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST1H2BMQ99879 126 aa7.95□□□□□ -1.14
NECTIN1-202ENST00000340882 A4D1N5 150 aa7.94□□□□□ -1.14
NECTIN1-202ENST00000340882 COA6Q5JTJ3 125 aaKnown RBP7.94□□□□□ -1.14
NECTIN1-202ENST00000340882 PCP4L1A6NKN8 68 aa7.93□□□□□ -1.14
NECTIN1-202ENST00000340882 KRTAP20-1Q3LI63 56 aa7.93□□□□□ -1.14
NECTIN1-202ENST00000340882 OCIAD2Q56VL3 154 aa7.93□□□□□ -1.14
NECTIN1-202ENST00000340882 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
NECTIN1-202ENST00000340882 NHP2Q9NX24 153 aaKnown RBP7.93□□□□□ -1.14
NECTIN1-202ENST00000340882 RBM12B-AS1Q9P1G2 102 aa7.93□□□□□ -1.14
NECTIN1-202ENST00000340882 TRGC2P03986 189 aa7.92□□□□□ -1.14
NECTIN1-202ENST00000340882 DSCR10P59022 87 aa7.92□□□□□ -1.14
NECTIN1-202ENST00000340882 HIST3H2BBQ8N257 126 aa7.92□□□□□ -1.14
NECTIN1-202ENST00000340882 NOTCH2NLQ7Z3S9 236 aa7.91□□□□□ -1.14
NECTIN1-202ENST00000340882 Q6ZQY7 126 aa7.9□□□□□ -1.14
NECTIN1-202ENST00000340882 TRAV13-2A0A0B4J235 113 aa7.89□□□□□ -1.15
NECTIN1-202ENST00000340882 LINC00575Q6W349 94 aa7.88□□□□□ -1.15
NECTIN1-202ENST00000340882 H3BUT2 72 aa7.87□□□□□ -1.15
NECTIN1-202ENST00000340882 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
NECTIN1-202ENST00000340882 PYY3Q5JQD4 70 aa7.86□□□□□ -1.15
NECTIN1-202ENST00000340882 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
NECTIN1-202ENST00000340882 TSTD3H0UI37 97 aa7.85□□□□□ -1.15
NECTIN1-202ENST00000340882 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
NECTIN1-202ENST00000340882 SYS1-DBNDD2H3BUS1 97 aa7.84□□□□□ -1.15
NECTIN1-202ENST00000340882 hADV29S1A0JD25 119 aa7.83□□□□□ -1.16
NECTIN1-202ENST00000340882 IFITM1P13164 125 aa7.82□□□□□ -1.16
NECTIN1-202ENST00000340882 SCGB1D4Q6XE38 83 aa7.81□□□□□ -1.16
NECTIN1-202ENST00000340882 LINC01545Q5VT33 79 aa7.8□□□□□ -1.16
NECTIN1-202ENST00000340882 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
NECTIN1-202ENST00000340882 Q6ZVH6 145 aa7.79□□□□□ -1.16
NECTIN1-202ENST00000340882 SS18L2Q9UHA2 77 aa7.79□□□□□ -1.16
NECTIN1-202ENST00000340882 VAMP3Q15836 100 aa7.77□□□□□ -1.17
NECTIN1-202ENST00000340882 COPS9Q8WXC6 57 aa7.77□□□□□ -1.17
NECTIN1-202ENST00000340882 A0A087WSZ3 146 aa7.76□□□□□ -1.17
NECTIN1-202ENST00000340882 A8MWP4 228 aa7.76□□□□□ -1.17
NECTIN1-202ENST00000340882 LINC00313P59037 77 aa7.76□□□□□ -1.17
NECTIN1-202ENST00000340882 SNHG12Q9BXW3 62 aa7.75□□□□□ -1.17
NECTIN1-202ENST00000340882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.74□□□□□ -1.17
NECTIN1-202ENST00000340882 TEN1Q86WV5 123 aa7.73□□□□□ -1.17
NECTIN1-202ENST00000340882 SIGMAR1Q99720 223 aa7.73□□□□□ -1.17
NECTIN1-202ENST00000340882 PET117Q6UWS5 81 aa7.72□□□□□ -1.17
NECTIN1-202ENST00000340882 MTURNQ8N3F0 131 aa7.71□□□□□ -1.18
NECTIN1-202ENST00000340882 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.18
NECTIN1-202ENST00000340882 SCGB1D1O95968 90 aa7.7□□□□□ -1.18
NECTIN1-202ENST00000340882 C14orf144Q96I85 54 aa7.69□□□□□ -1.18
NECTIN1-202ENST00000340882 C3orf79P0CE67 100 aa7.67□□□□□ -1.18
NECTIN1-202ENST00000340882 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
NECTIN1-202ENST00000340882 VAMP8Q9BV40 100 aa7.66□□□□□ -1.18
NECTIN1-202ENST00000340882 IGKV4-1P06312 121 aa7.65□□□□□ -1.18
NECTIN1-202ENST00000340882 KMT2DO14686 5537 aa7.64□□□□□ -1.19
NECTIN1-202ENST00000340882 M0R143 59 aa7.63□□□□□ -1.19
NECTIN1-202ENST00000340882 SPINK7P58062 85 aa7.63□□□□□ -1.19
NECTIN1-202ENST00000340882 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
NECTIN1-202ENST00000340882 NDUFV3P56181 108 aaKnown RBP7.62□□□□□ -1.19
NECTIN1-202ENST00000340882 KRTDAPP60985 99 aa7.62□□□□□ -1.19
NECTIN1-202ENST00000340882 DEFB116Q30KQ4 102 aa7.62□□□□□ -1.19
NECTIN1-202ENST00000340882 ATOH7Q8N100 152 aa7.62□□□□□ -1.19
NECTIN1-202ENST00000340882 KRTAP5-9P26371 169 aa7.61□□□□□ -1.19
NECTIN1-202ENST00000340882 A6NN06 94 aa7.6□□□□□ -1.19
NECTIN1-202ENST00000340882 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
NECTIN1-202ENST00000340882 IGHV6-1A0A0B4J1U7 121 aa7.58□□□□□ -1.2
NECTIN1-202ENST00000340882 BVES-AS1Q5T3Y7 98 aa7.57□□□□□ -1.2
NECTIN1-202ENST00000340882 ZCCHC13Q8WW36 166 aaKnown RBP7.57□□□□□ -1.2
NECTIN1-202ENST00000340882 PAM16Q9Y3D7 125 aa7.57□□□□□ -1.2
NECTIN1-202ENST00000340882 H3BMG7 143 aa7.56□□□□□ -1.2
NECTIN1-202ENST00000340882 SPATA45Q537H7 98 aa7.56□□□□□ -1.2
NECTIN1-202ENST00000340882 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
NECTIN1-202ENST00000340882 WFDC13Q8IUB5 93 aa7.55□□□□□ -1.2
NECTIN1-202ENST00000340882 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
NECTIN1-202ENST00000340882 A0A1B0GV90 55 aa7.54□□□□□ -1.2
NECTIN1-202ENST00000340882 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
NECTIN1-202ENST00000340882 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
NECTIN1-202ENST00000340882 HSBP1L1C9JCN9 74 aa7.53□□□□□ -1.2
NECTIN1-202ENST00000340882 COL5A1-AS1Q5SY13 56 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms