RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 A8MUN3 132 aa12.27□□□□□ -0.44
CDK13-202ENST00000340829 UBR5O95071 2799 aaPredicted RBP12.27□□□□□ -0.44
CDK13-202ENST00000340829 IGLV8-61A0A075B6I0 122 aa12.27□□□□□ -0.45
CDK13-202ENST00000340829 SPEGQ15772 3267 aa12.25□□□□□ -0.45
CDK13-202ENST00000340829 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
CDK13-202ENST00000340829 SPTBN5Q9NRC6 3674 aaKnown RBP12.22□□□□□ -0.45
CDK13-202ENST00000340829 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.45
CDK13-202ENST00000340829 COL12A1Q99715 3063 aa12.21□□□□□ -0.45
CDK13-202ENST00000340829 ATP11AUNQ6ZP68 121 aa12.21□□□□□ -0.45
CDK13-202ENST00000340829 LINC00304Q8N9R0 145 aa12.18□□□□□ -0.46
CDK13-202ENST00000340829 LRBAP50851 2863 aa12.18□□□□□ -0.46
CDK13-202ENST00000340829 TACC2O95359 2948 aa12.17□□□□□ -0.46
CDK13-202ENST00000340829 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.16□□□□□ -0.46
CDK13-202ENST00000340829 ITPR1Q14643 2758 aa12.14□□□□□ -0.47
CDK13-202ENST00000340829 OCR1Q9BZK8 76 aa12.13□□□□□ -0.47
CDK13-202ENST00000340829 TNP2Q05952 138 aa12.13□□□□□ -0.47
CDK13-202ENST00000340829 EYSQ5T1H1 3165 aa12.12□□□□□ -0.47
CDK13-202ENST00000340829 C9orf92A6NGG3 77 aa12.12□□□□□ -0.47
CDK13-202ENST00000340829 NBEAL1Q6ZS30 2694 aa12.08□□□□□ -0.48
CDK13-202ENST00000340829 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
CDK13-202ENST00000340829 REV3LO60673 3130 aa12.07□□□□□ -0.48
CDK13-202ENST00000340829 CYP4F30PQ9H0H9 118 aa12.06□□□□□ -0.48
CDK13-202ENST00000340829 SPRR1AP35321 89 aa12.06□□□□□ -0.48
CDK13-202ENST00000340829 KRTAP26-1Q6PEX3 210 aa12.04□□□□□ -0.48
CDK13-202ENST00000340829 KRTAP1-5Q9BYS1 174 aa12.02□□□□□ -0.49
CDK13-202ENST00000340829 ZZEF1O43149 2961 aa12□□□□□ -0.49
CDK13-202ENST00000340829 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
CDK13-202ENST00000340829 SPANXA2-OT1Q8N9U9 137 aa11.99□□□□□ -0.49
CDK13-202ENST00000340829 UQCR11O14957 56 aa11.96□□□□□ -0.49
CDK13-202ENST00000340829 J3QL48 77 aa11.96□□□□□ -0.49
CDK13-202ENST00000340829 CYSTM1Q9H1C7 97 aa11.96□□□□□ -0.5
CDK13-202ENST00000340829 CFAP47Q6ZTR5 3102 aa11.94□□□□□ -0.5
CDK13-202ENST00000340829 UTP20O75691 2785 aaKnown RBP11.94□□□□□ -0.5
CDK13-202ENST00000340829 ITPR2Q14571 2701 aa11.92□□□□□ -0.5
CDK13-202ENST00000340829 DMXL1Q9Y485 3027 aa11.91□□□□□ -0.5
CDK13-202ENST00000340829 NSD1Q96L73 2696 aaPredicted RBP11.91□□□□□ -0.5
CDK13-202ENST00000340829 Q8N1X5 172 aa11.89□□□□□ -0.51
CDK13-202ENST00000340829 PLAC8Q9NZF1 115 aa11.89□□□□□ -0.51
CDK13-202ENST00000340829 CD164Q04900 197 aa11.88□□□□□ -0.51
CDK13-202ENST00000340829 BAHCC1Q9P281 2608 aa11.88□□□□□ -0.51
CDK13-202ENST00000340829 MIR22HGQ0VDD5 57 aa11.87□□□□□ -0.51
CDK13-202ENST00000340829 USP34Q70CQ2 3546 aa11.87□□□□□ -0.51
CDK13-202ENST00000340829 COX6B2Q6YFQ2 88 aa11.86□□□□□ -0.51
CDK13-202ENST00000340829 ASH1LQ9NR48 2969 aaKnown RBP11.86□□□□□ -0.51
CDK13-202ENST00000340829 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
CDK13-202ENST00000340829 MMP24-AS1A0A0U1RRL7 71 aa11.86□□□□□ -0.51
CDK13-202ENST00000340829 PRR26Q8N8Z3 221 aa11.85□□□□□ -0.51
CDK13-202ENST00000340829 FLG2Q5D862 2391 aaPredicted RBP11.84□□□□□ -0.51
CDK13-202ENST00000340829 LOC400499M0QZD8 3231 aa11.83□□□□□ -0.51
CDK13-202ENST00000340829 SPRR1BP22528 89 aa11.83□□□□□ -0.52
CDK13-202ENST00000340829 SPINT4Q6UDR6 99 aa11.81□□□□□ -0.52
CDK13-202ENST00000340829 LINC00472Q9H8W2 130 aa11.79□□□□□ -0.52
CDK13-202ENST00000340829 ZANQ9Y493 2812 aa11.79□□□□□ -0.52
CDK13-202ENST00000340829 IGLV7-46A0A075B6I9 117 aa11.78□□□□□ -0.52
CDK13-202ENST00000340829 Q1T7F1 81 aa11.75□□□□□ -0.53
CDK13-202ENST00000340829 FAM229BQ4G0N7 80 aa11.74□□□□□ -0.53
CDK13-202ENST00000340829 HRES1P13985 223 aa11.74□□□□□ -0.53
CDK13-202ENST00000340829 STAB2Q8WWQ8 2551 aa11.72□□□□□ -0.53
CDK13-202ENST00000340829 APCP25054 2843 aa11.72□□□□□ -0.53
CDK13-202ENST00000340829 KRTAP4-16G5E9R7 235 aaPredicted RBP11.71□□□□□ -0.53
CDK13-202ENST00000340829 HIVEP1P15822 2718 aa11.7□□□□□ -0.54
CDK13-202ENST00000340829 Q8N9P0 234 aaPredicted RBP11.69□□□□□ -0.54
CDK13-202ENST00000340829 PANO1I0J062 215 aa11.69□□□□□ -0.54
CDK13-202ENST00000340829 Q5XG85 94 aa11.67□□□□□ -0.54
CDK13-202ENST00000340829 HRNRQ86YZ3 2850 aaPredicted RBP11.67□□□□□ -0.54
CDK13-202ENST00000340829 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
CDK13-202ENST00000340829 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
CDK13-202ENST00000340829 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
CDK13-202ENST00000340829 CRIPTQ9P021 101 aa11.65□□□□□ -0.54
CDK13-202ENST00000340829 LINC01554Q52M75 96 aa11.63□□□□□ -0.55
CDK13-202ENST00000340829 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
CDK13-202ENST00000340829 A0A0D9SG42 100 aa11.61□□□□□ -0.55
CDK13-202ENST00000340829 NIPBLQ6KC79 2804 aaeCLIP11.6□□□□□ -0.55
CDK13-202ENST00000340829 KTN1-AS1Q86SY8 53 aa11.6□□□□□ -0.55
CDK13-202ENST00000340829 RBM12B-AS1Q9P1G2 102 aa11.59□□□□□ -0.55
CDK13-202ENST00000340829 KRTAP10-1P60331 282 aa11.58□□□□□ -0.56
CDK13-202ENST00000340829 Q5W150 140 aa11.57□□□□□ -0.56
CDK13-202ENST00000340829 OXTP01178 125 aa11.56□□□□□ -0.56
CDK13-202ENST00000340829 ZCCHC13Q8WW36 166 aaKnown RBP11.55□□□□□ -0.56
CDK13-202ENST00000340829 LINC00483Q53H64 154 aa11.52□□□□□ -0.56
CDK13-202ENST00000340829 Q75L30 129 aa11.52□□□□□ -0.57
CDK13-202ENST00000340829 DCHS2Q6V1P9 2916 aa11.51□□□□□ -0.57
CDK13-202ENST00000340829 LINC01558Q9Y6Z2 57 aa11.5□□□□□ -0.57
CDK13-202ENST00000340829 KRTAP11-1Q8IUC1 163 aa11.49□□□□□ -0.57
CDK13-202ENST00000340829 KMT2BQ9UMN6 2715 aaPredicted RBP11.48□□□□□ -0.57
CDK13-202ENST00000340829 Q6ZR54 194 aa11.48□□□□□ -0.57
CDK13-202ENST00000340829 KRTAP7-1Q8IUC3 87 aa11.48□□□□□ -0.57
CDK13-202ENST00000340829 FBN2P35556 2912 aa11.47□□□□□ -0.57
CDK13-202ENST00000340829 NF1P21359 2839 aa11.46□□□□□ -0.57
CDK13-202ENST00000340829 CRYBG3Q68DQ2 2970 aa11.44□□□□□ -0.58
CDK13-202ENST00000340829 Q6ZSA8 131 aa11.44□□□□□ -0.58
CDK13-202ENST00000340829 LCA10Q71F78 164 aa11.44□□□□□ -0.58
CDK13-202ENST00000340829 KRTAP29-1A8MX34 341 aaPredicted RBP11.43□□□□□ -0.58
CDK13-202ENST00000340829 Q5VV11 94 aa11.43□□□□□ -0.58
CDK13-202ENST00000340829 DMBT1Q9UGM3 2413 aaPredicted RBP11.42□□□□□ -0.58
CDK13-202ENST00000340829 A0A1B0GU33 70 aa11.41□□□□□ -0.58
CDK13-202ENST00000340829 WDFY3Q8IZQ1 3526 aa11.4□□□□□ -0.59
CDK13-202ENST00000340829 Q6ZRN7 208 aaPredicted RBP11.38□□□□□ -0.59
CDK13-202ENST00000340829 A0A087X002 238 aa11.37□□□□□ -0.59
CDK13-202ENST00000340829 SPINK7P58062 85 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms