RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 IGFL1Q6UW32 110 aa12.81□□□□□ -0.36
UBC-201ENST00000339647 MP68P56378 58 aa12.8□□□□□ -0.36
UBC-201ENST00000339647 MRPL55Q7Z7F7 128 aaKnown RBP12.8□□□□□ -0.36
UBC-201ENST00000339647 B9D2Q9BPU9 175 aa12.79□□□□□ -0.36
UBC-201ENST00000339647 Q5VV11 94 aa12.78□□□□□ -0.36
UBC-201ENST00000339647 A0A087WSZ3 146 aa12.77□□□□□ -0.36
UBC-201ENST00000339647 TENM3Q9P273 2699 aa12.74□□□□□ -0.37
UBC-201ENST00000339647 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
UBC-201ENST00000339647 KRTAP29-1A8MX34 341 aaPredicted RBP12.72□□□□□ -0.37
UBC-201ENST00000339647 H0Y9P7 68 aa12.71□□□□□ -0.37
UBC-201ENST00000339647 DEFB131BA0A096LNP1 70 aa12.71□□□□□ -0.38
UBC-201ENST00000339647 Q8N9P0 234 aaPredicted RBP12.7□□□□□ -0.38
UBC-201ENST00000339647 PRLHP81277 87 aa12.69□□□□□ -0.38
UBC-201ENST00000339647 DNAH10OSP0CZ25 163 aa12.69□□□□□ -0.38
UBC-201ENST00000339647 NBEAL1Q6ZS30 2694 aa12.68□□□□□ -0.38
UBC-201ENST00000339647 CHKB-CPT1BH3BT56 60 aa12.68□□□□□ -0.38
UBC-201ENST00000339647 CASC2Q6XLA1 102 aa12.66□□□□□ -0.38
UBC-201ENST00000339647 SPANXA2-OT1Q8N9U9 137 aa12.65□□□□□ -0.38
UBC-201ENST00000339647 OXLD1Q5BKU9 147 aa12.65□□□□□ -0.39
UBC-201ENST00000339647 PRR15LQ9BU68 103 aa12.65□□□□□ -0.39
UBC-201ENST00000339647 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
UBC-201ENST00000339647 C16orf90A8MZG2 172 aa12.62□□□□□ -0.39
UBC-201ENST00000339647 IGLV8-61A0A075B6I0 122 aa12.61□□□□□ -0.39
UBC-201ENST00000339647 KRTAP10-11P60412 298 aa12.61□□□□□ -0.39
UBC-201ENST00000339647 C11orf45Q8TAV5 145 aa12.61□□□□□ -0.39
UBC-201ENST00000339647 LIMD2Q9BT23 127 aa12.61□□□□□ -0.39
UBC-201ENST00000339647 SRRM2Q9UQ35 2752 aaKnown RBP12.6□□□□□ -0.39
UBC-201ENST00000339647 UBE2AP49459 152 aa12.6□□□□□ -0.39
UBC-201ENST00000339647 CMYA5Q8N3K9 4069 aa12.6□□□□□ -0.39
UBC-201ENST00000339647 MGAM2Q2M2H8 2515 aa12.59□□□□□ -0.39
UBC-201ENST00000339647 LINC00588Q9Y4M8 146 aa12.59□□□□□ -0.39
UBC-201ENST00000339647 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
UBC-201ENST00000339647 H3BPC8 53 aa12.57□□□□□ -0.4
UBC-201ENST00000339647 DNAH1Q9P2D7 4330 aa12.57□□□□□ -0.4
UBC-201ENST00000339647 IGKV2-24A0A0C4DH68 120 aa12.56□□□□□ -0.4
UBC-201ENST00000339647 KRTAP24-1Q3LI83 254 aa12.56□□□□□ -0.4
UBC-201ENST00000339647 SPTSSBQ8NFR3 76 aa12.56□□□□□ -0.4
UBC-201ENST00000339647 LCA10Q71F78 164 aa12.55□□□□□ -0.4
UBC-201ENST00000339647 A8MWP4 228 aa12.54□□□□□ -0.4
UBC-201ENST00000339647 A0A096LNI7 61 aa12.53□□□□□ -0.4
UBC-201ENST00000339647 COA5Q86WW8 74 aa12.53□□□□□ -0.4
UBC-201ENST00000339647 LINC00472Q9H8W2 130 aa12.53□□□□□ -0.4
UBC-201ENST00000339647 CD164Q04900 197 aa12.52□□□□□ -0.41
UBC-201ENST00000339647 A6NED7 52 aa12.49□□□□□ -0.41
UBC-201ENST00000339647 H0Y9J4 135 aa12.48□□□□□ -0.41
UBC-201ENST00000339647 Q75L30 129 aa12.48□□□□□ -0.41
UBC-201ENST00000339647 KRTAP11-1Q8IUC1 163 aa12.48□□□□□ -0.41
UBC-201ENST00000339647 PCOTHQ58A44 107 aa12.47□□□□□ -0.41
UBC-201ENST00000339647 IGLV7-46A0A075B6I9 117 aa12.46□□□□□ -0.41
UBC-201ENST00000339647 MMP24-AS1A0A0U1RRL7 71 aa12.45□□□□□ -0.42
UBC-201ENST00000339647 KTN1-AS1Q86SY8 53 aa12.45□□□□□ -0.42
UBC-201ENST00000339647 LOC101927531A0A1B0GV80 90 aa12.45□□□□□ -0.42
UBC-201ENST00000339647 DNAH10Q8IVF4 4471 aa12.43□□□□□ -0.42
UBC-201ENST00000339647 ATP11AUNQ6ZP68 121 aa12.43□□□□□ -0.42
UBC-201ENST00000339647 PHF5AQ7RTV0 110 aaKnown RBP12.42□□□□□ -0.42
UBC-201ENST00000339647 SPAG11AQ6PDA7 123 aa12.39□□□□□ -0.43
UBC-201ENST00000339647 TENM2Q9NT68 2774 aa12.38□□□□□ -0.43
UBC-201ENST00000339647 CHTF8P0CG12 524 aa12.38□□□□□ -0.43
UBC-201ENST00000339647 SPRR1BP22528 89 aa12.38□□□□□ -0.43
UBC-201ENST00000339647 RBM12B-AS1Q9P1G2 102 aa12.37□□□□□ -0.43
UBC-201ENST00000339647 CSMD3Q7Z407 3707 aa12.37□□□□□ -0.43
UBC-201ENST00000339647 A6NN06 94 aa12.36□□□□□ -0.43
UBC-201ENST00000339647 CDC42SE1Q9NRR8 79 aa12.34□□□□□ -0.43
UBC-201ENST00000339647 COL7A1Q02388 2944 aa12.32□□□□□ -0.44
UBC-201ENST00000339647 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
UBC-201ENST00000339647 LINC01558Q9Y6Z2 57 aa12.31□□□□□ -0.44
UBC-201ENST00000339647 PLAC8Q9NZF1 115 aa12.29□□□□□ -0.44
UBC-201ENST00000339647 STAB2Q8WWQ8 2551 aa12.29□□□□□ -0.44
UBC-201ENST00000339647 Q96NJ1 140 aa12.28□□□□□ -0.44
UBC-201ENST00000339647 MOBPQ13875 183 aa12.27□□□□□ -0.44
UBC-201ENST00000339647 NDUFS5O43920 106 aa12.27□□□□□ -0.45
UBC-201ENST00000339647 DNAH3Q8TD57 4116 aa12.27□□□□□ -0.45
UBC-201ENST00000339647 LYSTQ99698 3801 aa12.27□□□□□ -0.45
UBC-201ENST00000339647 SPINK7P58062 85 aa12.26□□□□□ -0.45
UBC-201ENST00000339647 ASB16-AS1Q495Z4 193 aa12.26□□□□□ -0.45
UBC-201ENST00000339647 HRES1P13985 223 aa12.25□□□□□ -0.45
UBC-201ENST00000339647 TP53AIP1Q9HCN2 124 aa12.25□□□□□ -0.45
UBC-201ENST00000339647 Q6ZR54 194 aa12.24□□□□□ -0.45
UBC-201ENST00000339647 C8orf17Q9NRJ1 99 aa12.24□□□□□ -0.45
UBC-201ENST00000339647 IGLV9-49A0A0B4J1Y8 123 aa12.23□□□□□ -0.45
UBC-201ENST00000339647 DNAH9Q9NYC9 4486 aa12.22□□□□□ -0.45
UBC-201ENST00000339647 IGHV6-1A0A0B4J1U7 121 aa12.2□□□□□ -0.46
UBC-201ENST00000339647 HUWE1Q7Z6Z7 4374 aaKnown RBP12.2□□□□□ -0.46
UBC-201ENST00000339647 C7orf65Q6ZTY9 151 aa12.17□□□□□ -0.46
UBC-201ENST00000339647 PANO1I0J062 215 aa12.14□□□□□ -0.47
UBC-201ENST00000339647 KRTAP13-1Q8IUC0 172 aa12.14□□□□□ -0.47
UBC-201ENST00000339647 A0A087X002 238 aa12.14□□□□□ -0.47
UBC-201ENST00000339647 NOTCH2NLQ7Z3S9 236 aa12.14□□□□□ -0.47
UBC-201ENST00000339647 A0A1B0GVX0 72 aa12.13□□□□□ -0.47
UBC-201ENST00000339647 K7EIL1 84 aa12.13□□□□□ -0.47
UBC-201ENST00000339647 MDFIQ99750 246 aa12.13□□□□□ -0.47
UBC-201ENST00000339647 PRR26Q8N8Z3 221 aa12.12□□□□□ -0.47
UBC-201ENST00000339647 MRPL34Q9BQ48 92 aaKnown RBP12.11□□□□□ -0.47
UBC-201ENST00000339647 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
UBC-201ENST00000339647 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
UBC-201ENST00000339647 DNHD1Q96M86 4753 aa12.03□□□□□ -0.48
UBC-201ENST00000339647 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
UBC-201ENST00000339647 Q5W150 140 aa12.02□□□□□ -0.49
UBC-201ENST00000339647 ANAPC11Q9NYG5 84 aa12.02□□□□□ -0.49
UBC-201ENST00000339647 DNAH7Q8WXX0 4024 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms