RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DNAH11Q96DT5 4516 aa6.91□□□□□ -1.3
RTN3-201ENST00000338850 IGKV4-1P06312 121 aa6.91□□□□□ -1.3
RTN3-201ENST00000338850 C20orf197Q8N268 126 aa6.91□□□□□ -1.3
RTN3-201ENST00000338850 PKHD1P08F94 4074 aa6.9□□□□□ -1.3
RTN3-201ENST00000338850 NREPQ16612 68 aa6.9□□□□□ -1.3
RTN3-201ENST00000338850 FAM19A5Q7Z5A7 132 aaPredicted RBP6.9□□□□□ -1.3
RTN3-201ENST00000338850 Q8NBF4 154 aa6.9□□□□□ -1.3
RTN3-201ENST00000338850 SERP1Q9Y6X1 66 aa6.9□□□□□ -1.3
RTN3-201ENST00000338850 DYNC1H1Q14204 4646 aaKnown RBP6.89□□□□□ -1.31
RTN3-201ENST00000338850 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
RTN3-201ENST00000338850 ETDCA0A1B0GVM5 59 aa6.89□□□□□ -1.31
RTN3-201ENST00000338850 PKIGQ9Y2B9 76 aa6.89□□□□□ -1.31
RTN3-201ENST00000338850 PKD1P98161 4303 aa6.89□□□□□ -1.31
RTN3-201ENST00000338850 CNBPP62633 177 aaKnown RBP6.88□□□□□ -1.31
RTN3-201ENST00000338850 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
RTN3-201ENST00000338850 Q9BRP9 147 aa6.88□□□□□ -1.31
RTN3-201ENST00000338850 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
RTN3-201ENST00000338850 BPY2O14599 106 aa6.87□□□□□ -1.31
RTN3-201ENST00000338850 C1orf134Q5TEV5 83 aa6.87□□□□□ -1.31
RTN3-201ENST00000338850 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
RTN3-201ENST00000338850 IGLV8-61A0A075B6I0 122 aa6.86□□□□□ -1.31
RTN3-201ENST00000338850 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
RTN3-201ENST00000338850 NBDYA0A0U1RRE5 68 aa6.85□□□□□ -1.31
RTN3-201ENST00000338850 A0A1W2PNM2 257 aa6.85□□□□□ -1.31
RTN3-201ENST00000338850 C1orf137Q5JT78 98 aa6.85□□□□□ -1.31
RTN3-201ENST00000338850 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
RTN3-201ENST00000338850 REG3GQ6UW15 175 aa6.84□□□□□ -1.31
RTN3-201ENST00000338850 C16orf90A8MZG2 172 aa6.83□□□□□ -1.32
RTN3-201ENST00000338850 H0Y9J4 135 aa6.83□□□□□ -1.32
RTN3-201ENST00000338850 OXTP01178 125 aa6.83□□□□□ -1.32
RTN3-201ENST00000338850 C5orf47Q569G3 176 aa6.83□□□□□ -1.32
RTN3-201ENST00000338850 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
RTN3-201ENST00000338850 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
RTN3-201ENST00000338850 SCXQ7RTU7 201 aa6.82□□□□□ -1.32
RTN3-201ENST00000338850 RYR1P21817 5038 aa6.81□□□□□ -1.32
RTN3-201ENST00000338850 SPRR1BP22528 89 aa6.81□□□□□ -1.32
RTN3-201ENST00000338850 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
RTN3-201ENST00000338850 F8WEM9 126 aa6.8□□□□□ -1.32
RTN3-201ENST00000338850 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
RTN3-201ENST00000338850 Q5XG85 94 aa6.79□□□□□ -1.32
RTN3-201ENST00000338850 KRTAP1-5Q9BYS1 174 aa6.79□□□□□ -1.32
RTN3-201ENST00000338850 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
RTN3-201ENST00000338850 UBE2BP63146 152 aa6.78□□□□□ -1.32
RTN3-201ENST00000338850 DEFB105AQ8NG35 78 aa6.78□□□□□ -1.32
RTN3-201ENST00000338850 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
RTN3-201ENST00000338850 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
RTN3-201ENST00000338850 HSPG2P98160 4391 aa6.77□□□□□ -1.33
RTN3-201ENST00000338850 CDK2AP2O75956 126 aa6.76□□□□□ -1.33
RTN3-201ENST00000338850 DSCR10P59022 87 aa6.76□□□□□ -1.33
RTN3-201ENST00000338850 ST20-AS1Q8NBB2 130 aa6.76□□□□□ -1.33
RTN3-201ENST00000338850 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
RTN3-201ENST00000338850 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
RTN3-201ENST00000338850 A0A096LNI7 61 aa6.74□□□□□ -1.33
RTN3-201ENST00000338850 Q8N9L7 120 aa6.74□□□□□ -1.33
RTN3-201ENST00000338850 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
RTN3-201ENST00000338850 IGFL1Q6UW32 110 aa6.73□□□□□ -1.33
RTN3-201ENST00000338850 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
RTN3-201ENST00000338850 HCG22E2RYF7 251 aa6.72□□□□□ -1.33
RTN3-201ENST00000338850 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
RTN3-201ENST00000338850 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.34
RTN3-201ENST00000338850 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.34
RTN3-201ENST00000338850 H3BPC8 53 aa6.7□□□□□ -1.34
RTN3-201ENST00000338850 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
RTN3-201ENST00000338850 Q8N1X5 172 aa6.7□□□□□ -1.34
RTN3-201ENST00000338850 C9orf163Q8N9P6 203 aa6.7□□□□□ -1.34
RTN3-201ENST00000338850 DNAH5Q8TE73 4624 aa6.7□□□□□ -1.34
RTN3-201ENST00000338850 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
RTN3-201ENST00000338850 K7EQZ3 153 aa6.69□□□□□ -1.34
RTN3-201ENST00000338850 PSCAO43653 123 aa6.69□□□□□ -1.34
RTN3-201ENST00000338850 NDUFB1O75438 58 aa6.68□□□□□ -1.34
RTN3-201ENST00000338850 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.67□□□□□ -1.34
RTN3-201ENST00000338850 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
RTN3-201ENST00000338850 CYP4F30PQ9H0H9 118 aa6.67□□□□□ -1.34
RTN3-201ENST00000338850 LRCOL1A6NCL2 159 aa6.66□□□□□ -1.34
RTN3-201ENST00000338850 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
RTN3-201ENST00000338850 UBE2AP49459 152 aa6.66□□□□□ -1.34
RTN3-201ENST00000338850 PRLHP81277 87 aa6.66□□□□□ -1.34
RTN3-201ENST00000338850 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
RTN3-201ENST00000338850 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
RTN3-201ENST00000338850 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
RTN3-201ENST00000338850 HIGD2AQ9BW72 106 aa6.65□□□□□ -1.34
RTN3-201ENST00000338850 IGKV2-24A0A0C4DH68 120 aa6.64□□□□□ -1.35
RTN3-201ENST00000338850 A0A087WSZ3 146 aa6.63□□□□□ -1.35
RTN3-201ENST00000338850 A0A087WTM6 91 aa6.63□□□□□ -1.35
RTN3-201ENST00000338850 A8MWP4 228 aa6.63□□□□□ -1.35
RTN3-201ENST00000338850 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
RTN3-201ENST00000338850 LINC00472Q9H8W2 130 aa6.63□□□□□ -1.35
RTN3-201ENST00000338850 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
RTN3-201ENST00000338850 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
RTN3-201ENST00000338850 hDV103S1A0JD37 113 aa6.61□□□□□ -1.35
RTN3-201ENST00000338850 MP68P56378 58 aa6.61□□□□□ -1.35
RTN3-201ENST00000338850 KRTAP10-1P60331 282 aa6.61□□□□□ -1.35
RTN3-201ENST00000338850 LINC00483Q53H64 154 aa6.61□□□□□ -1.35
RTN3-201ENST00000338850 PHF5AQ7RTV0 110 aaKnown RBP6.61□□□□□ -1.35
RTN3-201ENST00000338850 SPANXA2-OT1Q8N9U9 137 aa6.61□□□□□ -1.35
RTN3-201ENST00000338850 SPACA4Q8TDM5 124 aa6.59□□□□□ -1.35
RTN3-201ENST00000338850 ZNF706Q9Y5V0 76 aaPredicted RBP6.59□□□□□ -1.35
RTN3-201ENST00000338850 KRTAP11-1Q8IUC1 163 aa6.58□□□□□ -1.36
RTN3-201ENST00000338850 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
RTN3-201ENST00000338850 FAT1Q14517 4588 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms