RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 C9JAW5 83 aa3.35□□□□□ -1.87
PRPF4B-201ENST00000337659 ANAPC13Q9BS18 74 aa3.35□□□□□ -1.87
PRPF4B-201ENST00000337659 NDUFB1O75438 58 aa3.35□□□□□ -1.87
PRPF4B-201ENST00000337659 CHTF8P0CG12 524 aa3.35□□□□□ -1.87
PRPF4B-201ENST00000337659 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
PRPF4B-201ENST00000337659 SMCR5Q8TEV8 140 aa3.34□□□□□ -1.87
PRPF4B-201ENST00000337659 HIGD2AQ9BW72 106 aa3.34□□□□□ -1.87
PRPF4B-201ENST00000337659 ORMDL1Q9P0S3 153 aa3.34□□□□□ -1.87
PRPF4B-201ENST00000337659 ATP5EP2Q5VTU8 51 aa3.34□□□□□ -1.87
PRPF4B-201ENST00000337659 FAM19A5Q7Z5A7 132 aaPredicted RBP3.34□□□□□ -1.87
PRPF4B-201ENST00000337659 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
PRPF4B-201ENST00000337659 XGP55808 180 aa3.34□□□□□ -1.88
PRPF4B-201ENST00000337659 RYR1P21817 5038 aa3.34□□□□□ -1.88
PRPF4B-201ENST00000337659 ETDBQ3ZM63 59 aa3.33□□□□□ -1.88
PRPF4B-201ENST00000337659 COX7BP24311 80 aa3.33□□□□□ -1.88
PRPF4B-201ENST00000337659 BAALC-AS2P0C853 105 aa3.33□□□□□ -1.88
PRPF4B-201ENST00000337659 C6orf99Q4VX62 202 aa3.33□□□□□ -1.88
PRPF4B-201ENST00000337659 LRP1BQ9NZR2 4599 aa3.32□□□□□ -1.88
PRPF4B-201ENST00000337659 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
PRPF4B-201ENST00000337659 TEX49A0A1B0GTD5 131 aa3.32□□□□□ -1.88
PRPF4B-201ENST00000337659 A0A1W2PNN7 141 aa3.32□□□□□ -1.88
PRPF4B-201ENST00000337659 RTL8CO15255 209 aa3.32□□□□□ -1.88
PRPF4B-201ENST00000337659 PRR3P79522 188 aaKnown RBP3.32□□□□□ -1.88
PRPF4B-201ENST00000337659 Q8N377 158 aa3.32□□□□□ -1.88
PRPF4B-201ENST00000337659 H3BS24 57 aa3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 NCR3O14931 201 aa3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 ASB16-AS1Q495Z4 193 aa3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 KRTAP10-4P60372 401 aaPredicted RBP3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 SPINK6Q6UWN8 80 aa3.31□□□□□ -1.88
PRPF4B-201ENST00000337659 LINC00643Q86TS7 51 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 C14orf132Q9NPU4 83 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 LECT2O14960 151 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 REG3GQ6UW15 175 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 FAT1Q14517 4588 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 A8MU10 97 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 CXCL6P80162 114 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 FAM236DA0A1B0GTK5 79 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 FAM236CP0DP71 79 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 GAGE2AQ6NT46 116 aa3.3□□□□□ -1.88
PRPF4B-201ENST00000337659 FUSP35637 526 aaKnown RBP eCLIP3.29□□□□□ -1.88
PRPF4B-201ENST00000337659 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
PRPF4B-201ENST00000337659 ABCA13Q86UQ4 5058 aa3.29□□□□□ -1.88
PRPF4B-201ENST00000337659 DSCR8Q96T75 97 aa3.29□□□□□ -1.88
PRPF4B-201ENST00000337659 IGLV5-52A0A0A0MRZ9 124 aa3.28□□□□□ -1.88
PRPF4B-201ENST00000337659 PANO1I0J062 215 aa3.28□□□□□ -1.88
PRPF4B-201ENST00000337659 IGKV4-1P06312 121 aa3.28□□□□□ -1.88
PRPF4B-201ENST00000337659 RBM3P98179 157 aaKnown RBP3.28□□□□□ -1.88
PRPF4B-201ENST00000337659 UBL5Q9BZL1 73 aa3.28□□□□□ -1.88
PRPF4B-201ENST00000337659 J3QL48 77 aa3.28□□□□□ -1.88
PRPF4B-201ENST00000337659 CRYGAP11844 174 aa3.27□□□□□ -1.89
PRPF4B-201ENST00000337659 XAGE1AQ9HD64 81 aa3.27□□□□□ -1.89
PRPF4B-201ENST00000337659 NBEAL2Q6ZNJ1 2754 aa3.27□□□□□ -1.89
PRPF4B-201ENST00000337659 NDUFV3P56181 108 aaKnown RBP3.27□□□□□ -1.89
PRPF4B-201ENST00000337659 CD164Q04900 197 aa3.27□□□□□ -1.89
PRPF4B-201ENST00000337659 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
PRPF4B-201ENST00000337659 C1orf134Q5TEV5 83 aa3.26□□□□□ -1.89
PRPF4B-201ENST00000337659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.26□□□□□ -1.89
PRPF4B-201ENST00000337659 FAM229BQ4G0N7 80 aa3.26□□□□□ -1.89
PRPF4B-201ENST00000337659 Q6ZQY7 126 aa3.26□□□□□ -1.89
PRPF4B-201ENST00000337659 K7ERS5 55 aa3.25□□□□□ -1.89
PRPF4B-201ENST00000337659 MT-ATP8P03928 68 aa3.25□□□□□ -1.89
PRPF4B-201ENST00000337659 LINC00846Q9NV44 126 aa3.25□□□□□ -1.89
PRPF4B-201ENST00000337659 Q8NBF4 154 aa3.24□□□□□ -1.89
PRPF4B-201ENST00000337659 ERC2-IT1O76042 136 aa3.24□□□□□ -1.89
PRPF4B-201ENST00000337659 A0A1W2PNM2 257 aa3.24□□□□□ -1.89
PRPF4B-201ENST00000337659 MP68P56378 58 aa3.24□□□□□ -1.89
PRPF4B-201ENST00000337659 TMEM258P61165 79 aa3.24□□□□□ -1.89
PRPF4B-201ENST00000337659 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
PRPF4B-201ENST00000337659 FP248Q71RG6 208 aaPredicted RBP3.23□□□□□ -1.89
PRPF4B-201ENST00000337659 Q96NJ1 140 aa3.23□□□□□ -1.89
PRPF4B-201ENST00000337659 NREPQ16612 68 aa3.23□□□□□ -1.89
PRPF4B-201ENST00000337659 HRCT1Q6UXD1 115 aa3.23□□□□□ -1.89
PRPF4B-201ENST00000337659 V9GYY9 64 aa3.22□□□□□ -1.89
PRPF4B-201ENST00000337659 ZNF706Q9Y5V0 76 aaPredicted RBP3.22□□□□□ -1.89
PRPF4B-201ENST00000337659 ZNF861PO60384 105 aa3.22□□□□□ -1.89
PRPF4B-201ENST00000337659 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
PRPF4B-201ENST00000337659 PHF5AQ7RTV0 110 aaKnown RBP3.21□□□□□ -1.9
PRPF4B-201ENST00000337659 PLA2G1BP04054 148 aaKnown RBP3.21□□□□□ -1.9
PRPF4B-201ENST00000337659 KRTAP10-2P60368 255 aa3.21□□□□□ -1.9
PRPF4B-201ENST00000337659 Q6ZVQ6 151 aa3.21□□□□□ -1.9
PRPF4B-201ENST00000337659 LINC00472Q9H8W2 130 aa3.21□□□□□ -1.9
PRPF4B-201ENST00000337659 IGFL1Q6UW32 110 aa3.2□□□□□ -1.9
PRPF4B-201ENST00000337659 IGLV7-43P04211 117 aa3.2□□□□□ -1.9
PRPF4B-201ENST00000337659 TENM2Q9NT68 2774 aa3.2□□□□□ -1.9
PRPF4B-201ENST00000337659 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
PRPF4B-201ENST00000337659 KRTAP29-1A8MX34 341 aaPredicted RBP3.19□□□□□ -1.9
PRPF4B-201ENST00000337659 KRTAP10-1P60331 282 aa3.19□□□□□ -1.9
PRPF4B-201ENST00000337659 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
PRPF4B-201ENST00000337659 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
PRPF4B-201ENST00000337659 FAM229AH3BQW9 127 aa3.19□□□□□ -1.9
PRPF4B-201ENST00000337659 C3orf22Q8N5N4 141 aa3.18□□□□□ -1.9
PRPF4B-201ENST00000337659 ST20-AS1Q8NBB2 130 aa3.18□□□□□ -1.9
PRPF4B-201ENST00000337659 Q8N1X5 172 aa3.18□□□□□ -1.9
PRPF4B-201ENST00000337659 CIRBP-AS1Q8TBR5 109 aa3.18□□□□□ -1.9
PRPF4B-201ENST00000337659 DSCR10P59022 87 aa3.17□□□□□ -1.9
PRPF4B-201ENST00000337659 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
PRPF4B-201ENST00000337659 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms