RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RPL37AP61513 92 aaKnown RBP7.69□□□□□ -1.18
HDAC6-201ENST00000334136 SEC61GP60059 68 aa7.68□□□□□ -1.18
HDAC6-201ENST00000334136 OBSCN-AS1Q96MR7 158 aa7.68□□□□□ -1.18
HDAC6-201ENST00000334136 K7EQZ3 153 aa7.68□□□□□ -1.18
HDAC6-201ENST00000334136 ZNF469Q96JG9 3925 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-201ENST00000334136 A0A0G2JQZ4 141 aa7.68□□□□□ -1.18
HDAC6-201ENST00000334136 A0A1W2PNN7 141 aa7.68□□□□□ -1.18
HDAC6-201ENST00000334136 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
HDAC6-201ENST00000334136 TRBV7-4A0A0J9YYF1 115 aa7.67□□□□□ -1.18
HDAC6-201ENST00000334136 FAM168BA1KXE4 195 aa7.67□□□□□ -1.18
HDAC6-201ENST00000334136 C15orf56Q8N910 161 aa7.67□□□□□ -1.18
HDAC6-201ENST00000334136 hDV103S1A0JD37 113 aa7.67□□□□□ -1.18
HDAC6-201ENST00000334136 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
HDAC6-201ENST00000334136 A8MUN3 132 aa7.65□□□□□ -1.19
HDAC6-201ENST00000334136 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
HDAC6-201ENST00000334136 TNP2Q05952 138 aa7.64□□□□□ -1.19
HDAC6-201ENST00000334136 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
HDAC6-201ENST00000334136 AKAP9Q99996 3911 aa7.63□□□□□ -1.19
HDAC6-201ENST00000334136 LCE6AA0A183 80 aa7.63□□□□□ -1.19
HDAC6-201ENST00000334136 Q8N377 158 aa7.63□□□□□ -1.19
HDAC6-201ENST00000334136 RETNLBQ9BQ08 111 aa7.63□□□□□ -1.19
HDAC6-201ENST00000334136 SPAG11AQ6PDA7 123 aa7.62□□□□□ -1.19
HDAC6-201ENST00000334136 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
HDAC6-201ENST00000334136 TGP01266 2768 aa7.62□□□□□ -1.19
HDAC6-201ENST00000334136 KRTAP1-5Q9BYS1 174 aa7.61□□□□□ -1.19
HDAC6-201ENST00000334136 LIMD2Q9BT23 127 aa7.6□□□□□ -1.19
HDAC6-201ENST00000334136 ERC2-IT1O76042 136 aa7.6□□□□□ -1.19
HDAC6-201ENST00000334136 Q8NDZ9 215 aa7.6□□□□□ -1.19
HDAC6-201ENST00000334136 CIRBP-AS1Q8TBR5 109 aa7.6□□□□□ -1.19
HDAC6-201ENST00000334136 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
HDAC6-201ENST00000334136 TRRAPQ9Y4A5 3859 aa7.57□□□□□ -1.2
HDAC6-201ENST00000334136 A0A1B0GW54 56 aa7.57□□□□□ -1.2
HDAC6-201ENST00000334136 OXTP01178 125 aa7.57□□□□□ -1.2
HDAC6-201ENST00000334136 Q5XG85 94 aa7.57□□□□□ -1.2
HDAC6-201ENST00000334136 PHF5AQ7RTV0 110 aaKnown RBP7.57□□□□□ -1.2
HDAC6-201ENST00000334136 CNBPP62633 177 aaKnown RBP7.56□□□□□ -1.2
HDAC6-201ENST00000334136 TRAV22A0A0B4J277 110 aa7.56□□□□□ -1.2
HDAC6-201ENST00000334136 A0A1W2PNM2 257 aa7.56□□□□□ -1.2
HDAC6-201ENST00000334136 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-201ENST00000334136 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
HDAC6-201ENST00000334136 EPM2AB3EWF7 344 aa7.54□□□□□ -1.2
HDAC6-201ENST00000334136 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
HDAC6-201ENST00000334136 IGFL1Q6UW32 110 aa7.52□□□□□ -1.2
HDAC6-201ENST00000334136 SPINK1P00995 79 aa7.52□□□□□ -1.21
HDAC6-201ENST00000334136 Q6ZR54 194 aa7.52□□□□□ -1.21
HDAC6-201ENST00000334136 OCR1Q9BZK8 76 aa7.52□□□□□ -1.21
HDAC6-201ENST00000334136 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
HDAC6-201ENST00000334136 FP248Q71RG6 208 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-201ENST00000334136 MOBPQ13875 183 aa7.5□□□□□ -1.21
HDAC6-201ENST00000334136 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
HDAC6-201ENST00000334136 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
HDAC6-201ENST00000334136 FAM229BQ4G0N7 80 aa7.48□□□□□ -1.21
HDAC6-201ENST00000334136 COA5Q86WW8 74 aa7.47□□□□□ -1.21
HDAC6-201ENST00000334136 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-201ENST00000334136 A8MWP4 228 aa7.46□□□□□ -1.22
HDAC6-201ENST00000334136 H3BPC8 53 aa7.45□□□□□ -1.22
HDAC6-201ENST00000334136 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
HDAC6-201ENST00000334136 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
HDAC6-201ENST00000334136 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
HDAC6-201ENST00000334136 IGKV2D-30A0A075B6S6 120 aa7.44□□□□□ -1.22
HDAC6-201ENST00000334136 IGKV2-30P06310 120 aa7.44□□□□□ -1.22
HDAC6-201ENST00000334136 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
HDAC6-201ENST00000334136 DSCR10P59022 87 aa7.42□□□□□ -1.22
HDAC6-201ENST00000334136 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
HDAC6-201ENST00000334136 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
HDAC6-201ENST00000334136 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-201ENST00000334136 A0A1B0GU69 56 aa7.41□□□□□ -1.22
HDAC6-201ENST00000334136 IGLV8-61A0A075B6I0 122 aa7.41□□□□□ -1.22
HDAC6-201ENST00000334136 KRTAP10-2P60368 255 aa7.4□□□□□ -1.22
HDAC6-201ENST00000334136 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
HDAC6-201ENST00000334136 ACYP2P14621 99 aa7.38□□□□□ -1.23
HDAC6-201ENST00000334136 K7ERS5 55 aa7.38□□□□□ -1.23
HDAC6-201ENST00000334136 LOC101927531A0A1B0GV80 90 aa7.37□□□□□ -1.23
HDAC6-201ENST00000334136 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
HDAC6-201ENST00000334136 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
HDAC6-201ENST00000334136 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
HDAC6-201ENST00000334136 CYP4F30PQ9H0H9 118 aa7.36□□□□□ -1.23
HDAC6-201ENST00000334136 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
HDAC6-201ENST00000334136 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
HDAC6-201ENST00000334136 KRTAP10-1P60331 282 aa7.34□□□□□ -1.23
HDAC6-201ENST00000334136 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.24
HDAC6-201ENST00000334136 ZNF861PO60384 105 aa7.34□□□□□ -1.24
HDAC6-201ENST00000334136 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
HDAC6-201ENST00000334136 SPRR4Q96PI1 79 aa7.32□□□□□ -1.24
HDAC6-201ENST00000334136 Q1T7F1 81 aa7.32□□□□□ -1.24
HDAC6-201ENST00000334136 PLAC8Q9NZF1 115 aa7.32□□□□□ -1.24
HDAC6-201ENST00000334136 IGLV7-43P04211 117 aa7.31□□□□□ -1.24
HDAC6-201ENST00000334136 C7orf65Q6ZTY9 151 aa7.31□□□□□ -1.24
HDAC6-201ENST00000334136 CD164Q04900 197 aa7.3□□□□□ -1.24
HDAC6-201ENST00000334136 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
HDAC6-201ENST00000334136 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
HDAC6-201ENST00000334136 LINC00313P59037 77 aa7.27□□□□□ -1.24
HDAC6-201ENST00000334136 A0A1B0GVX0 72 aa7.27□□□□□ -1.25
HDAC6-201ENST00000334136 SPANXA2-OT1Q8N9U9 137 aa7.27□□□□□ -1.25
HDAC6-201ENST00000334136 TYMSOSQ8TAI1 123 aa7.27□□□□□ -1.25
HDAC6-201ENST00000334136 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
HDAC6-201ENST00000334136 PANO1I0J062 215 aa7.25□□□□□ -1.25
HDAC6-201ENST00000334136 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
HDAC6-201ENST00000334136 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-201ENST00000334136 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms